Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Crp regulog to Salmonella enterica subsp. arizonae serovar 62:z4,z23:--

Reference regulog properties
Source regulog: Crp - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Carbon catabolism
Effector: Cyclic 3',5'-AMP
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Orthologous TF(s) SARI_04149
Regulated genes 236
Built upon 2301 sites [see more]
Predicted regulatory interactions in Salmonella enterica subsp. arizonae serovar 62:z4,z23:--
Locus tag Position Score Sequence
Position: -331
Score: 4.3
Sequence: AAGTGTTATTTTGATCGCAAAG
Locus tag: SARI_00141
SARI_00141 -331 4.3 AAGTGTTATTTTGATCGCAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: mltB
Ortholog function: membrane-bound lytic murein transglycosylase B
Escherichia coli str. K-12 substr. MG1655 b2701 -184 4.6 AAGTGTTATTTTGATCGCAAAA
Salmonella typhimurium LT2 STM2831 -182 4.4 AAGTGTTATTGTGATCGCAAAA
Citrobacter koseri ATCC BAA-895 CKO_04055 -184 4.5 AAGTGTTATTTTGATCTCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03036 -296 4.3 AAGTGTTAAATGGATCGCAAAA
Serratia proteamaculans 568 Spro_3399 -136 4.1 TTCTGTGCTGCCCGTCACGTTT
Position: -99
Score: 3.8
Sequence: TTACGTGATATGGATTGAAATC
Position: -71
Score: 3.9
Sequence: TTTTGTGGTATGGTTTAAACAT
Locus tag: SARI_00257
SARI_00257 -99 3.8 TTACGTGATATGGATTGAAATC
-71 3.9 TTTTGTGGTATGGTTTAAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroF
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Salmonella typhimurium LT2 STM2670 -71 3.9 TTTTGTGGTATGGTTTAAACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02923 -159 3.8 TATTGTTATACGCATCGCGCCA
Edwardsiella tarda EIB202 ETAE_2837 -117 3.8 ATGTACGATATTGTTTACATAT
Proteus mirabilis HI4320 PMI0387 -214 4.5 TTATTTTATCTTAGTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1262 -262 3.6 TGTTTTGATATTGATTTTATTT
Position: -4
Score: 5.6
Sequence: TAATGTGATTTACATCACACAT
Locus tag: SARI_00262
SARI_00262 -4 5.6 TAATGTGATTTACATCACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: raiA
Ortholog function: stationary phase translation inhibitor and ribosome stability factor
Escherichia coli str. K-12 substr. MG1655 b2597 -81 4.8 TTATGAGATTTTCATCACACAT
Citrobacter koseri ATCC BAA-895 CKO_03918 -40 5.2 TAATGTGATTTAAATCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02919 -88 5.6 AAATGTGATTTATATCACACAT
Enterobacter sp. 638 Ent638_3076 -81 5.4 ATGTGTGATTTAGATCACACAT
Erwinia amylovora ATCC 49946 EAM_2617 -83 5.2 AAATGTGATTTCAATCACGATT
Serratia proteamaculans 568 Spro_0882 -83 4.8 ATACGTGATTTTCATCACGCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3349 -86 4 AAAAGCGATCAATCTCACGCTT
Edwardsiella tarda EIB202 ETAE_2834 -82 3.8 ATCCGTGATTTTCCTCTCACAC
Proteus mirabilis HI4320 PMI0391 -82 4.6 AAAAGTGATCTTGATCATGTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1266 -87 5.1 AATAGTGATTTAGATCACCTTT
Position: -128
Score: 4.2
Sequence: TTTATTGATTTAAATCAAAGAA
Locus tag: SARI_00279
SARI_00279 -128 4.2 TTTATTGATTTAAATCAAAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: grcA
Ortholog function: Autonomous glycyl radical cofactor
Citrobacter koseri ATCC BAA-895 CKO_00205 -127 4 TTTGTTGATTTAAATCAAAGAA
Position: -106
Score: 3.8
Sequence: TTCTGTGACGCTCCTCAGCATT
Locus tag: SARI_00324
SARI_00324 -106 3.8 TTCTGTGACGCTCCTCAGCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: csiE
Ortholog function: Stationary phase inducible protein CsiE
Escherichia coli str. K-12 substr. MG1655 b2535 -104 3.5 TTCTGTGACGCTTGCCAACATT
Salmonella typhimurium LT2 STM2553 -106 3.8 TTCTGTGACACTCCTCAGCATT
Citrobacter koseri ATCC BAA-895 CKO_00245 -105 3.4 TTCTGTGATGCTCGCCAGCATT
-42 3.6 TTTAGCTATCCTTATCAAACAA
Erwinia amylovora ATCC 49946 EAM_2496 -103 3.4 TTTTGTGACCTGCCTTAAAAGC
Yersinia pestis KIM y1328 -161 4.1 TAATGTAACACATAGCGCATTA
Serratia proteamaculans 568 Spro_3633 -276 3.4 AAAGGTGGTGTTCATATCAATA
Position: -283
Score: 4.3
Sequence: TTATGTGATTTACTGCAATATT
Locus tag: SARI_00400
SARI_00400 -283 4.3 TTATGTGATTTACTGCAATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yffB
Ortholog function: FIG138056: a glutathione-dependent thiol reductase
Escherichia coli str. K-12 substr. MG1655 b2471 -246 3.8 GTATGTGATACACAGCAACATT
Salmonella typhimurium LT2 STM2482 -282 4 TTATGTGACTTACTGCAATATT
Citrobacter koseri ATCC BAA-895 CKO_00317 -276 4 TTATGTGACTTACTGCAATATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02804 -218 4 TAATGTGACGTAGAGCAACCTC
-179 4 TAATGTTAAAGCCCTCACATCA
Enterobacter sp. 638 Ent638_2966 -254 4 TTATGTGACCAATAGCAATATT
-77 3.6 ATATGTTATGTTTTGCCAAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1292 -138 3.7 TTCTGCAACGCAGTTCACAGTA
Position: -53
Score: 3.7
Sequence: AAGTGTGAATCAACACACTCAT
Locus tag: SARI_00410
SARI_00410 -53 3.7 AAGTGTGAATCAACACACTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: talA
Ortholog function: Transaldolase (EC 2.2.1.2)
Escherichia coli str. K-12 substr. MG1655 b2464 -83 4 TTTTTTGATGCGTTTAGCGAAA
-53 3.9 AAGTGTGAATTAACGCACTCAT
Salmonella typhimurium LT2 STM2473 -53 3.7 AAGTGTGAATCAACACACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02798 -80 3.7 TTTGGTTATGTACCTCATCAAT
Enterobacter sp. 638 Ent638_2959 -152 3.6 ATTTGTTATCAATTTATAACAA
-83 3.9 TTTTGTTAAGTACGTCATGTAT
Position: -240
Score: 3.8
Sequence: ATGAGTGTGTTGATTCACACTT
Locus tag: SARI_00411
SARI_00411 -240 3.8 ATGAGTGTGTTGATTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: maeB
Ortholog function: malic enzyme
Escherichia coli str. K-12 substr. MG1655 b2463 -257 3.9 ATGAGTGCGTTAATTCACACTT
Salmonella typhimurium LT2 STM2472 -240 3.8 ATGAGTGTGTTGATTCACACTT
Enterobacter sp. 638 Ent638_2958 -231 4.1 ATACATGACGTACTTAACAAAA
Yersinia pestis KIM y1449 -92 3.7 GATTGTGATAAATCACTCACTA
Serratia proteamaculans 568 Spro_3472 -209 3.6 CTTTGTTATCAAACTCACTATC
-90 4.1 GTTTGTGACGTTTCTCTCACTA
Photorhabdus luminescens subsp. laumondii TTO1 plu2719 -74 4 TGTTATGATTTGACACACAGTA
Position: -103
Score: 4.6
Sequence: CTTAGTGATCTACCTCACCTTT
Locus tag: SARI_00414
SARI_00414 -103 4.6 CTTAGTGATCTACCTCACCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: b2462
Ortholog function: putative carboxysome structural protein, ethanol utilization
Escherichia coli str. K-12 substr. MG1655 b2462 -103 4.6 CTTAGTGATCTACCTCACCTTT
Salmonella typhimurium LT2 STM2470 -168 3.8 AAATGTGATGCACCACGATATT
-103 4.6 CTTAGTGATCTACCTCACCTTT
Citrobacter koseri ATCC BAA-895 CKO_00333 -103 4.6 CTTAGTGATCTACTTCACCTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02796 -102 4.3 CTGAGTGATCCACTTCACCTTT
Position: -53
Score: 3.9
Sequence: AATATAGATCTCCATCACAGAA
Locus tag: SARI_00480
SARI_00480 -53 3.9 AATATAGATCTCCATCACAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfeO
Ortholog function: Chloride channel protein
Escherichia coli str. K-12 substr. MG1655 b2389 -109 4.1 AATATCGATCTGGGTCACACAA
Salmonella typhimurium LT2 STM2404 -109 3.9 AATATAGATCTTCATCACAGAA
Citrobacter koseri ATCC BAA-895 CKO_00411 -134 4.4 AATATCGATCTGCATCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02739 -192 4.3 TTTAGCGACACAGGTCACATTT
Enterobacter sp. 638 Ent638_2922 -111 3.7 ATAATCGATCTTCGTCACAGAA
Serratia proteamaculans 568 Spro_3408 -249 4.7 ATTAGCGATCCGGATCACAAAA
Position: -116
Score: 4
Sequence: TTCTGTGATGGAGATCTATATT
Locus tag: SARI_00481
SARI_00481 -116 4 TTCTGTGATGGAGATCTATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glk
Ortholog function: glucokinase
Escherichia coli str. K-12 substr. MG1655 b2388 -116 4.1 TTGTGTGACCCAGATCGATATT
Salmonella typhimurium LT2 STM2403 -116 3.9 TTCTGTGATGAAGATCTATATT
Citrobacter koseri ATCC BAA-895 CKO_00412 -116 4.5 TTATGTGATGCAGATCGATATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02738 -117 4.4 AAATGTGACCTGTGTCGCTAAA
Enterobacter sp. 638 Ent638_2921 -116 3.8 TTCTGTGACGAAGATCGATTAT
Yersinia pestis KIM y1505 -113 4.7 TTATGAGATGTCAGTCACAAAA
Serratia proteamaculans 568 Spro_3407 -116 4.8 TTTTGTGATCCGGATCGCTAAT
Position: -262
Score: 4.8
Sequence: TTAAGTGACCGAAATCACACTT
Position: -240
Score: 3.9
Sequence: AAAAATGATCTAAAACAAAAAT
Locus tag: SARI_00508
SARI_00508 -262 4.8 TTAAGTGACCGAAATCACACTT
-240 3.9 AAAAATGATCTAAAACAAAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadL
Ortholog function: Long-chain fatty acid transport protein
Escherichia coli str. K-12 substr. MG1655 b2344 -269 4.8 ATAAGTGACCGAAATCACACTT
-247 3.9 AAAAATGATCTAAAACAAAATT
Salmonella typhimurium LT2 STM2391 -262 4.8 TTAAGTGACCGAAATCACACTT
-240 3.9 AAAAATGATCTAAAACAAAAAT
Citrobacter koseri ATCC BAA-895 CKO_00446 -263 4.8 ATAAGTGACCGAAATCACACTT
-241 3.9 AAAAATGATCTAAAACAAAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02726 -264 4.7 TTAAGTGACAGAAATCACACTT
-242 3.9 AAAAATGATCTAAAACAAAAAT
Enterobacter sp. 638 Ent638_2884 -269 4.2 GTAAGTGACCGATATCACACTA
-247 4 AAAAATGATCTAGCGCAAAAAT
-214 3.7 ATGAGTGCGACGGCTCGCATTT
Erwinia amylovora ATCC 49946 EAM_2348 -194 3.9 TTTTGTTAAGCAGATCTCTTTT
Serratia proteamaculans 568 Spro_3381 -271 5.1 TTAAGTGATGGAAATCACAAAT
-196 3.8 TTTTGTTAGCCAGATCTCTCTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3081 -332 3.8 AATTTTTATCTTCCTTATATTT
-262 4.9 TTTAGTGATATCAGTCACATTA
Proteus mirabilis HI4320 PMI1810 -326 3.7 AAGTGTTAATTATCTATCATAA
-186 4.2 TAATGTTAACTAAATCCCAAAT
Position: -143
Score: 4.6
Sequence: AATTGTGATAGCGCTATCAAAT
Locus tag: SARI_00554
SARI_00554 -143 4.6 AATTGTGATAGCGCTATCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_00488
Ortholog function: LacI-family transcriptional regulator
Salmonella typhimurium LT2 STM2345 -192 4 AGCTGCGATCGTTATCACAAAG
-143 4.6 AATTGTGATAGCGCTATCAAAT
Citrobacter koseri ATCC BAA-895 CKO_00488 -192 4.6 ATCTGTGATCATATTCACAAAG
-143 4.5 ATATGTGATAGCGCTATCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01748 -155 4.2 AACTGTGATACACCTCCCAAAG
-53 3.6 AGTTATAATGCGATTCGCAGAT
Enterobacter sp. 638 Ent638_2847 -178 4.1 AGCTGCGATCAAGATCACAAAG
-129 4.6 AATTGTGATAGCGCTATCAAAT
Yersinia pestis KIM y1619 -208 5.4 TAATGTGATCTGGATCTCAATT
-158 4.6 ATTTGTGATAGCGCTATCATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3772 -246 4.5 TAATGTGATTAACATCCAAAAA
-196 4 AACTGTGACCGGCTTAGCACAA
Edwardsiella tarda EIB202 ETAE_3025 -210 4.3 TTTCGTGATAGCGCTATCATTT
Proteus mirabilis HI4320 PMI1778 -139 4.2 AATTGTGATAGCGCTATTATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1978 -195 3.8 GCTAGTGATATTAGTCACAAAT
-145 4.7 AATTGTGATAGCGCTATCATTT
Position: -163
Score: 4.4
Sequence: GAATGTGAATTACAGCACATAT
Locus tag: SARI_00608
SARI_00608 -163 4.4 GAATGTGAATTACAGCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: sn-glycerol-3-phosphate dehydrogenase subunit A
Escherichia coli str. K-12 substr. MG1655 b2241 -165 4.6 AAATGTGAATTGCCGCACACAT
Salmonella typhimurium LT2 STM2284 -163 5 TAATGTGAATTACAGCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00536 -163 4.7 TAATGTGAATTACAGCACAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -165 4.3 TACTGTGAAACATCGCACAATT
-115 3.8 ATGTGAGCACGAAATCACATAA
Enterobacter sp. 638 Ent638_2805 -163 4.1 TACTGTGAATCAACGCACAGAT
Yersinia pestis KIM y0404 -231 3.6 AATTGTTACCTATTTTATGAAA
-155 4.4 ACCTGTGATTTTGATCACAATC
Serratia proteamaculans 568 Spro_0200 -231 3.6 CGCTGTGATGGATGGCGCAATT
-138 4.9 AATCGTGATTATGATCACATTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -148 5.1 TTTAGTGATGCAAATCACACTT
Edwardsiella tarda EIB202 ETAE_3115 -247 4 TACTGTGAGAGATCGCTCATAT
-142 4.8 TAGAGTGATTTTGATCACATTG
Proteus mirabilis HI4320 PMI3592 -262 3.7 TACTGTGAAGTAATACTCAGTT
-170 5.5 ATTTGTGATTAGTATCACATAT
Position: -199
Score: 3.6
Sequence: ATGTTTGATTTCGCGCATAATC
Position: -159
Score: 4.1
Sequence: AAACGTGATTCCGTGCGCCTTT
Position: -110
Score: 4.8
Sequence: ATATGTGCTGTAATTCACATTC
Locus tag: SARI_00609
SARI_00609 -199 3.6 ATGTTTGATTTCGCGCATAATC
-159 4.1 AAACGTGATTCCGTGCGCCTTT
-110 4.8 ATATGTGCTGTAATTCACATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: glycerol-3-phosphate transporter
Escherichia coli str. K-12 substr. MG1655 b2240 -219 3.7 TTGTTTGATTTCGCGCATATTC
-179 3.6 AAACGTGATTTCATGCGTCATT
-129 4.6 ATGTGTGCGGCAATTCACATTT
Salmonella typhimurium LT2 STM2283 -220 3.6 ATGTTTGATTTCGCGCATAATC
-180 4.2 AAACGTGATTTCGTGCGCCTTT
-131 5.2 ATATGTGCTGTAATTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_00537 -221 3.6 TTGTTTGATTTCGCGCATAATC
-181 4 AAACGTGATTTCGTGCGCTTTT
-132 4.8 ATCTGTGCTGTAATTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -218 3.8 TTGTTTGATTTCGAGCATATTC
-178 4.6 TTATGTGATTTCGTGCTCACAT
-128 4.5 AATTGTGCGATGTTTCACAGTA
Enterobacter sp. 638 Ent638_2804 -201 3.6 TTGTTTGATTTCGAACATAATC
-161 3.8 AAGCGTGATCTCATGCGCTTAT
-111 4 ATCTGTGCGTTGATTCACAGTA
Erwinia amylovora ATCC 49946 EAM_0195 -240 3.7 AAACGCGATGCGGTTAACGATG
-147 3.7 ATTTGTGCCTCTCTTCACGGTC
Serratia proteamaculans 568 Spro_0199 -249 4.5 GAATGTGATCATAATCACGATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -253 3.7 ATGTTTGATAAAGAGCAAAAAC
-193 4.9 AAGTGTGATTTGCATCACTAAA
Edwardsiella tarda EIB202 ETAE_3116 -200 3.7 ATATGAGCGATCTCTCACAGTA
Proteus mirabilis HI4320 PMI3591 -291 3.6 ATGTTTGATAATGAGCAAAAAC
-232 5.4 ATATGTGATACTAATCACAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -250 4.9 TATTGTGACAATTGTCACAATT
Position: -299
Score: 3.5
Sequence: GTATTTGATGTATATCAATTAC
Position: -233
Score: 3.7
Sequence: ATTTGTGTAAAAAGTCACATCA
Position: -200
Score: 3.6
Sequence: AAGGTTGAGTTAGATCGCAGAA
Locus tag: SARI_00667
SARI_00667 -299 3.5 GTATTTGATGTATATCAATTAC
-233 3.7 ATTTGTGTAAAAAGTCACATCA
-200 3.6 AAGGTTGAGTTAGATCGCAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yejG
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b2181 -158 3.7 AAACGTGACCACGCCCGCAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02614 -204 3.8 AAAGTTGTTTTGGATCACAGAA
Erwinia amylovora ATCC 49946 EAM_2233 -177 3.6 AAATGAGCATTACTTCTCAAAA
Yersinia pestis KIM y2914 -238 4.4 AAATGGGATCTGAATCCCAAAT
Serratia proteamaculans 568 Spro_3250 -214 4.2 AAATGCGAGCTGAGTCGCAAAA
-121 4.1 GCTTGTGATGTTTTTTACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2740 -178 4 ATTCGTGATCAGTTTGGCATTA
-101 3.8 TGTTGTTTTTTTGTTCACGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2865 -185 4.1 AAATGAGAGATTGATCTCACTT
-183 3.6 ATGAGAGATTGATCTCACTTTT
-141 3.8 TAATGTAATACTATAAACACAA
Position: -128
Score: 3.7
Sequence: ATTTGTGCGTTCCGCCACAGAT
Locus tag: SARI_00673
SARI_00673 -128 3.7 ATTTGTGCGTTCCGCCACAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: spr
Ortholog function: predicted peptidase, outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b2175 -130 4.1 TTTTGTGCGTTAGTCCACAGAT
Salmonella typhimurium LT2 STM2214 -128 3.7 ATTTGTGCGTTCCGCCACAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02608 -292 3.6 TAGGGTAATCTCGTTCTCGTTT
-234 4.2 AATTGTGCGTGACTGCACAAAT
Enterobacter sp. 638 Ent638_2771 -250 3.6 AATCGCTTTGTCTATCACAATT
Yersinia pestis KIM y2908 -128 3.7 GAATGTGCGTTCATGCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2735 -159 3.9 TAATGTGCATTCTGGCACACTT
Edwardsiella tarda EIB202 ETAE_2298 -131 4.4 AAGTGTGTTCTGCTGCACAATT
Proteus mirabilis HI4320 PMI0831 -129 4.2 TTACGTGCTTTAGAGCACGTTT
Position: -212
Score: 4.6
Sequence: TTTTTTGAGGTGAAGCACATTT
Locus tag: SARI_00678
SARI_00678 -212 4.6 TTTTTTGAGGTGAAGCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: setB
Ortholog function: Sugar efflux transporter B
Escherichia coli str. K-12 substr. MG1655 b2170 -211 4.6 AAGTTTGATGTGCTGCACAATT
Salmonella typhimurium LT2 STM2207 -213 4.6 TTTTTTGAGGTGAAGCACATTT
Citrobacter koseri ATCC BAA-895 CKO_00612 -212 3.7 AATTTAGAGATAAAGCACACTT
Enterobacter sp. 638 Ent638_2764 -208 3.9 AATTTAGAAGTGCAGCACATTT
Position: -177
Score: 4.6
Sequence: AAATGTGCTTCACCTCAAAAAA
Locus tag: SARI_00679
SARI_00679 -177 4.6 AAATGTGCTTCACCTCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fruB
Ortholog function: PTS system, fructose-specific IIA/FPr component
Escherichia coli str. K-12 substr. MG1655 b2169 -178 4.3 AATTGTGCAGCACATCAAACTT
Salmonella typhimurium LT2 STM2206 -177 4.6 AAATGTGCTTCACCTCAAAAAA
Citrobacter koseri ATCC BAA-895 CKO_00613 -50 4.1 AAGTGTGCTTTATCTCTAAATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02600 -177 3.5 AAGTGTGCAGTACCTCTAAGTT
Enterobacter sp. 638 Ent638_2763 -178 4.3 AAATGTGCTGCACTTCTAAATT
Erwinia amylovora ATCC 49946 EAM_2223 -179 4.4 AAATGTGCTGGCTGTCAAAAAT
Yersinia pestis KIM y2887 -178 4.1 AAATGTGCGGAATGTCAAAAAT
Serratia proteamaculans 568 Spro_3230 -177 4 AAGTGTGCGTGAGGTCAAAAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2729 -180 4.1 AAATGTGCGTGATGTCAAAATT
Edwardsiella tarda EIB202 ETAE_2303 -199 4.1 AAATGTGCTGAAGGTCTAAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1992 -180 4.7 AAATGTGAGTAATCTCAAAAAA
Position: -101
Score: 4
Sequence: TTATGTGCGCTACCTCACGCAC
Locus tag: SARI_00699
SARI_00699 -101 4 TTATGTGCGCTACCTCACGCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: folE
Ortholog function: GTP cyclohydrolase I
Escherichia coli str. K-12 substr. MG1655 b2153 -101 3.8 TTATGTGCGCCGCCTCACGCAC
Salmonella typhimurium LT2 STM2193 -101 4 TTATGTGCGCTACCTCACGCAC
Citrobacter koseri ATCC BAA-895 CKO_00638 -98 3.8 TTATGTGCGCCGCCTCACGCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02591 -84 3.5 TTCTGTGCGCCACCTCACGCAC
Enterobacter sp. 638 Ent638_2753 -84 3.9 TTATGTGCGCCACCTCACGCAC
Serratia proteamaculans 568 Spro_1560 -121 4.3 AATCTTGACCGGGTTCACGTTA
Proteus mirabilis HI4320 PMI0639 -86 4.9 TAATGTGATTCAGCTCATCTAA
Position: -103
Score: 3.5
Sequence: CCCTGTGATGTTTCTCACGCAG
Position: -38
Score: 3.3
Sequence: ATTTGTGAGCATTTTTGAACTC
Locus tag: SARI_00701
SARI_00701 -103 3.5 CCCTGTGATGTTTCTCACGCAG
-38 3.3 ATTTGTGAGCATTTTTGAACTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: galS
Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b2151 -146 3.5 GATAACGATCTGGATCACATTC
-95 3.9 TGCTGTGACTCGATTCACGAAG
Salmonella typhimurium LT2 STM2191 -154 3.5 GATAACGATCTGGATCACATTC
-103 3.5 CCCTGTGATGTTTCTCACGCAG
-38 3.3 ATTTGTGAGCATTTTTGAACTC
Citrobacter koseri ATCC BAA-895 CKO_00640 -157 3.5 GATAACGATCTGGATCACATTC
-106 3.4 CCCTGTGACCTTACTCACGTAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02589 -160 3.3 GATAACGATCTCGATCACAATC
-109 3.4 CCGTGTGACCTCACTCACGCAG
-33 3.6 TGACGTGCTGTAATTCTCTTAA
Enterobacter sp. 638 Ent638_2751 -160 3.4 GATAACGATCTGGATCACAATC
-109 4.1 CTGTGTGAGCTTCTTCACGTAG
Erwinia amylovora ATCC 49946 EAM_2208 -110 3.4 GGCTGTGAGGTTTCTCACGTAG
Serratia proteamaculans 568 Spro_1562 -135 3.4 AATTGAGATCTGGCGCAGGTAG
-84 3.5 TCCTGTGACGGGATTCACGCAG
Position: -265
Score: 4.4
Sequence: ATCTGTGAGTAAATTCACAGTT
Locus tag: SARI_00702
SARI_00702 -265 4.4 ATCTGTGAGTAAATTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: mglB
Ortholog function: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3)
Escherichia coli str. K-12 substr. MG1655 b2150 -270 4.5 ATCTGTGAGTGATTTCACAGTA
Citrobacter koseri ATCC BAA-895 CKO_00641 -270 4.7 ATATGTGAGTAAATTCACAGTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02588 -239 4.8 ATTTGTGAGTAAATTCACAGTA
Enterobacter sp. 638 Ent638_2750 -271 4.4 ATCTGTGAGTAAATTCACAGTA
Yersinia pestis KIM y2662 -212 4.4 ATCTGTGAGAAAATTCACAGTT
Serratia proteamaculans 568 Spro_1563 -229 4.4 ATCTGTGAGAAAATTCACAGAT
Position: -128
Score: 4.4
Sequence: ATTTGCGATGCGTAGCGCATTT
Position: -78
Score: 4.5
Sequence: CAATGAGACATACATCACATAT
Locus tag: SARI_00718
SARI_00718 -128 4.4 ATTTGCGATGCGTAGCGCATTT
-78 4.5 CAATGAGACATACATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cdd
Ortholog function: cytidine deaminase
Escherichia coli str. K-12 substr. MG1655 b2143 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 5.1 TAATGAGATTCAGATCACATAT
Salmonella typhimurium LT2 STM2183 -128 4.2 ATTTGCGATACGTCGCGCATTT
-78 4.8 CAATGAGATTTAGATCACATAT
Citrobacter koseri ATCC BAA-895 CKO_00646 -128 4.3 ATTTGCGATGCGTCGCGCATTT
-78 4.8 CAATGAGATTTGGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02584 -78 4.4 GAATGAGATATTCATCACATAT
Enterobacter sp. 638 Ent638_2746 -127 4.2 ATTTGCGATGCGTCGCGCAATT
-77 4.9 TAATGAGAACTGGATCACATAT
Erwinia amylovora ATCC 49946 EAM_2202 -124 3.9 ACTTGCGATAAGTCTCTCATTT
-104 4.1 TTTGGTGATGCATTTCATTTAT
-74 4.7 TAGAGCGATTTAGATCACATAT
Yersinia pestis KIM y2657 -75 5 TAATGAGATATAAATCACAATT
Serratia proteamaculans 568 Spro_1568 -127 4.1 ACTTGCGATACATCTCGCAATT
-77 4.5 TAAAGAGATTTACATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2830 -130 4.6 AATTGAGATACATCTCGCATTT
-79 4.5 TAAAGAGATTCCGATCACAATT
Edwardsiella tarda EIB202 ETAE_1162 -76 4.9 AAAAGTGATTATTATCACAAAT
Proteus mirabilis HI4320 PMI0643 -132 4.4 ATTTGAGATGTATCTCCCAATT
-82 5.1 AAATATGATTTTAATCACATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu1547 -75 4.7 CTATATGATATTTATCACATTA
Position: -68
Score: 4.6
Sequence: TGATGTGATCGGTAGCACGTTT
Locus tag: SARI_00720
SARI_00720 -68 4.6 TGATGTGATCGGTAGCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yohJ
Ortholog function: LrgA family protein
Escherichia coli str. K-12 substr. MG1655 b2141 -68 4.9 TAATGTGATCGGTAGCACGTTT
Salmonella typhimurium LT2 STM2181 -68 4.6 TGATGTGATCGGTAGCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00648 -68 4.6 TGATGTGATCGGTAGCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02582 -68 5 TGATGTGATCGGTAGCACATTT
Enterobacter sp. 638 Ent638_2744 -68 4.7 TGATGTGATCCGTAGCACGTTT
Yersinia pestis KIM y2654 -32 4.7 TAGTGTGATGGGTAGCACAGAA
Serratia proteamaculans 568 Spro_1570 -62 4.3 ATTTGTGGCGGAGGTCACAGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2828 -69 4.5 ATTCGTGATCTGTGGCACGTAA
Edwardsiella tarda EIB202 ETAE_1164 -68 4.9 TGATGTGATCAGTAGCACATTT
Proteus mirabilis HI4320 PMI0645 -71 5.2 TATTGTGATCCATAGCACACTT
Position: -42
Score: 4.2
Sequence: AATCGTGACAATTGTCATATTA
Locus tag: SARI_00778
SARI_00778 -42 4.2 AATCGTGACAATTGTCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yegH
Ortholog function: putative membrane protein
Escherichia coli str. K-12 substr. MG1655 b2063 -43 4.6 AATTGTGACATTTGTCATACAA
Salmonella typhimurium LT2 STM2119 -42 4.5 AATTGTGACAATTGTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_00719 -42 4.5 AATTGTGACAACTGTCATATAA
Enterobacter sp. 638 Ent638_2677 -42 4.4 AAGTGTGACAAATGTCATATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1559 -193 3.9 ATTTGTTAATGTGATCACATGT
Position: -95
Score: 4.8
Sequence: AAATGTGCCTTGTGTCACATTT
Locus tag: SARI_00825
SARI_00825 -95 4.8 AAATGTGCCTTGTGTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dacD2
Ortholog function: D-alanyl-D-alanine carboxypeptidase
Escherichia coli str. K-12 substr. MG1655 b2010 -99 4.3 AAATGAGAGGGTAGTCACATTT
Salmonella typhimurium LT2 STM2062 -95 4.8 AAATGTGCCTTGTGTCACATTT
Position: -102
Score: 4.1
Sequence: GATTGCGAGGTTGCTCACAAAA
Locus tag: SARI_00826
SARI_00826 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbmC
Ortholog function: DNA gyrase inhibitor
Escherichia coli str. K-12 substr. MG1655 b2009 -93 3.5 GAGTGCGAGTCTGCTCGCATAA
Salmonella typhimurium LT2 STM2061 -102 4.1 GATTGCGAGGTTGCTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_00775 -219 3.5 GAGTGCGAGTCTGCTCACATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02467 -88 3.6 CTCTGTGAATTCGCGCACATAC
Enterobacter sp. 638 Ent638_2577 -97 3.6 TCGTGCGAGTCTGCTCGCATAA
-65 3.6 ATATTTGCTGCACATAAAGAAT
Position: -103
Score: 5.5
Sequence: AAATGTGATAAATATCACATTA
Locus tag: SARI_00942
SARI_00942 -103 5.5 AAATGTGATAAATATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: b1963
Ortholog function: orf, hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1963 -287 4.6 TGGTGTGATCAGGCGCACATTA
Salmonella typhimurium LT2 STM1994 -70 5.5 AAATGTGATTAATATCACATTA
-34 4.4 TCATATGACTTACATCACAAAA
Position: -201
Score: 4
Sequence: TGTTTTTACTTTACTCACATAA
Locus tag: SARI_00955
SARI_00955 -201 4 TGTTTTTACTTTACTCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rcsA
Ortholog function: Colanic acid capsular biosynthesis activation accesory protein RcsA, co-regulator with RcsB
Escherichia coli str. K-12 substr. MG1655 b1951 -201 4 TGTTTTAAGCTCACTCACATAT
Salmonella typhimurium LT2 STM1982 -201 4 TGTTTTTACTTCACTCACATAA
Citrobacter koseri ATCC BAA-895 CKO_00992 -200 4.1 TGTTTTTACCTTACTCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02421 -195 3.7 TGTTTTTAATTCGGTCACACTA
Enterobacter sp. 638 Ent638_2542 -206 4.3 TGTTTTTATGCCCTTCACAATA
Position: -265
Score: 3.7
Sequence: AATTGTTATTTAATTTAACGTT
Locus tag: SARI_01106
SARI_01106 -265 3.7 AATTGTTATTTAATTTAACGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: b1821
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM1834 -276 3.7 AATTGTTATTTAATTTAACGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2389 -267 3.8 TAGTGTTGTTTGCATCATAAAT
Proteus mirabilis HI4320 PMI1608 -272 3.8 AATTATTATCAATATCATCTTT
-237 3.9 TAATATGTTGCCTTTCATAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2701 -281 3.9 TATTGTGCTATCTTTTAAATTG
-179 3.7 AAACGTGGTGCGGGTAACCTTA
Position: -21
Score: 3.8
Sequence: CTGTGTAATGGAAATCTCACTA
Locus tag: SARI_01134
SARI_01134 -21 3.8 CTGTGTAATGGAAATCTCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadR
Ortholog function: fatty acid metabolism regulator
Escherichia coli str. K-12 substr. MG1655 b1187 -21 3.9 CTGTGTTATGGAAATCTCACTA
Salmonella typhimurium LT2 STM1805 -21 3.8 CTGTGTAATGGAAATCTCACTA
Enterobacter sp. 638 Ent638_2365 -21 3.8 CTGTGTAATGGAAATCTCACTA
Yersinia pestis KIM y2177 -113 3.8 CTTTATGACTGCTTTCACCATT
Proteus mirabilis HI4320 PMI1510 -111 4.4 TTTTATGATGCCATTCACTATT
-84 3.8 ATGGTTGAGCTATATCAAAATT
Position: -237
Score: 5.2
Sequence: TATGGTGATGTGCTTCACATAT
Locus tag: SARI_01135
SARI_01135 -237 5.2 TATGGTGATGTGCTTCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1188 -235 4.4 TATGGTGAGCTGGCTCACATCT
Salmonella typhimurium LT2 STM1804.S -243 4.9 TATGGTGACGTGCTTCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02310 -174 4 TATGGTGACTTAACTCACAGCA
Enterobacter sp. 638 Ent638_2364 -236 4.2 TATGGTGACTTACCTCACACCT
Position: -107
Score: 4.9
Sequence: ATATGTGAAGCACATCACCATA
Locus tag: SARI_01136
SARI_01136 -107 4.9 ATATGTGAAGCACATCACCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dadA
Ortholog function: D-amino acid dehydrogenase small subunit
Escherichia coli str. K-12 substr. MG1655 b1189 -116 4.7 AGATGTGAGCCAGCTCACCATA
Salmonella typhimurium LT2 STM1803 -107 4.6 ATATGTGAAGCACGTCACCATA
Citrobacter koseri ATCC BAA-895 CKO_01193 -107 4.5 AGATGTGAGGTGCGTCACCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02309 -106 4.1 TGCTGTGAGTTAAGTCACCATA
Enterobacter sp. 638 Ent638_2363 -107 4.3 AGGTGTGAGGTAAGTCACCATA
Serratia proteamaculans 568 Spro_2746 -113 4.6 AATTGTGAATGTTGTCACGTTT
Proteus mirabilis HI4320 PMI1509 -121 4.7 AAATGTGATTTGACTCTAAAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2561 -114 5.4 AATTGTGATCTAAATCATAAAT
Position: -106
Score: 4.4
Sequence: ATTTGTGATCGCACCCGCACTT
Locus tag: SARI_01170
SARI_01170 -106 4.4 ATTTGTGATCGCACCCGCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychH
Ortholog function: membrane protein
Escherichia coli str. K-12 substr. MG1655 b1205 -105 4.5 AATTGTGATCACGCCCGCACAT
Salmonella typhimurium LT2 STM1782 -105 4.4 ATTTGTGATCGCACCCGCACTT
Citrobacter koseri ATCC BAA-895 CKO_01260 -104 4.1 AATTGTGATCGCCCACGCACTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02241 -100 4.1 TAATGTGATCGTGGACGCACTC
Enterobacter sp. 638 Ent638_2343 -119 3.7 TGTTGTGACGAGAGTCATTAAT
-101 4 TAATGTGATCATTCACGCAACT
Erwinia amylovora ATCC 49946 EAM_1581 -97 3.9 AAATGTGATCGCTGACTCATCA
Yersinia pestis KIM y2296 -145 3.9 AGTTGTGATCGCTACCGCAACA
Serratia proteamaculans 568 Spro_1985 -117 4.2 ATTTGTGATCGCCTACGCAATC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2185 -275 3.6 TAGCGTGATTATGAGAACGCTA
-117 3.8 ATCTGTGATCCCTCCCGCAATC
Photorhabdus luminescens subsp. laumondii TTO1 plu2065 -189 4.1 AGTTGTGATCGTGTCCGCAATG
Position: -330
Score: 4.3
Sequence: ATTTAGGATTCAGGTCACATTT
Locus tag: SARI_01203
SARI_01203 -330 4.3 ATTTAGGATTCAGGTCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tdk
Ortholog function: Thymidine kinase (EC 2.7.1.21)
Yersinia pestis KIM y2145 -208 4.9 TATTGTGAGATTGCTCATATAA
Serratia proteamaculans 568 Spro_2705 -203 4.3 AAATGTGATGTCAGACAGAAAT
Edwardsiella tarda EIB202 ETAE_1506 -206 4 AACTGTTAGGTCGATCACTTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2497 -157 4.1 TGGTGTGATGGTGGTCATGAAT
Position: -242
Score: 4.9
Sequence: AAACTTGATTTAGATCACACAA
Locus tag: SARI_01204
SARI_01204 -242 4.9 AAACTTGATTTAGATCACACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655 b1241 -241 5 AAATTTGATTTGGATCACGTAA
Salmonella typhimurium LT2 STM1749 -242 4.9 AATCTTGATTTAGATCACACAA
Citrobacter koseri ATCC BAA-895 CKO_01318 -242 4.9 AAATTTGATCTGGATCACGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -237 4.7 ATACTTGATCTAAATCACGTAA
Enterobacter sp. 638 Ent638_2304 -253 4.1 TAAATTGATTCAGATCATGTTT
Erwinia amylovora ATCC 49946 EAM_1900 -223 3.9 ATTGATGATCTGCATCATCTTT
Yersinia pestis KIM y2023 -286 5.3 TTTTGTGATTTAAATCACGAAA
Serratia proteamaculans 568 Spro_2704 -278 5.1 TTTTATGATTTAAATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -315 4.5 AAGTTCGATGTTGATCACAAAA
Edwardsiella tarda EIB202 ETAE_1508 -265 5 TTTCGTGACCTTAATCACAAAA
Proteus mirabilis HI4320 PMI1486 -246 5.4 TATTGTGATGTAGATCACTTTA
-187 3.7 AAAGGAGATCTTTTTAAAATAT
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -237 3.7 TATTTTTATTAGATTAAAAATT
-138 4.6 TTATGTGATTAAGATCAATATA
Position: -256
Score: 4.9
Sequence: TTGTGTGATCTAAATCAAGTTT
Locus tag: SARI_01205
SARI_01205 -256 4.9 TTGTGTGATCTAAATCAAGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ychE
Ortholog function: putative channel protein
Escherichia coli str. K-12 substr. MG1655 b1242 -257 5.1 TTACGTGATCCAAATCAAATTT
Salmonella typhimurium LT2 STM1748 -256 4.8 TTGTGTGATCTAAATCAAGATT
Citrobacter koseri ATCC BAA-895 CKO_01319 -167 5 TTGCGTGATCCAGATCAAATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02198 -261 4.8 TTACGTGATTTAGATCAAGTAT
Enterobacter sp. 638 Ent638_2303 -256 4 AAACATGATCTGAATCAATTTA
Erwinia amylovora ATCC 49946 EAM_1899 -158 3.8 AAAGATGATGCAGATCATCAAT
Serratia proteamaculans 568 Spro_2703 -268 5.2 TTTTGTGATTTAAATCATAAAA
Proteus mirabilis HI4320 PMI1485 -290 5.3 TAAAGTGATCTACATCACAATA
Photorhabdus luminescens subsp. laumondii TTO1 plu2495 -295 4.9 TATATTGATCTTAATCACATAA
Position: -166
Score: 3.6
Sequence: AAAATTGATTTGAATTACTATA
Position: -82
Score: 3.9
Sequence: AAATGTGATCTGAGTTAGATCA
Position: -77
Score: 4
Sequence: TGATCTGAGTTAGATCACTTAT
Locus tag: SARI_01222
SARI_01222 -166 3.6 AAAATTGATTTGAATTACTATA
-82 3.9 AAATGTGATCTGAGTTAGATCA
-77 4 TGATCTGAGTTAGATCACTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W
Escherichia coli str. K-12 substr. MG1655 b1256 -166 4.9 AAAATTGATTTAAATCACATTA
-82 3.8 TAATGTGATCTATGTAGGATCA
Salmonella typhimurium LT2 STM1732 -82 4.2 AAATGTGATCTGTATTAGATCA
Citrobacter koseri ATCC BAA-895 CKO_01333 -82 3.9 TAATGTGATCTGTATTGGATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01248 -101 3.9 CATTGCGATCGGTAGCAAAAAT
-45 4 TAGTGTGATCTAAAACAGATCA
Enterobacter sp. 638 Ent638_2283 -121 3.7 AAAATTAATCTGGATCAACAAA
Yersinia pestis KIM y2044 -69 3.9 AGATGTGATCTCGATTAGATCA
Serratia proteamaculans 568 Spro_2674 -135 3.8 TTTTTTGATTCAGATCAATCCT
Edwardsiella tarda EIB202 ETAE_1528 -161 3.9 CTGATTGATGTCTATCAAATTT
Proteus mirabilis HI4320 PMI1350 -168 4.6 AAATTTGATGTGGATCAATTAT
-85 3.8 AGTTGTGATCGGCATTAGATCA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -164 4.3 AACTTTGATTTGGATCAAGTTA
-39 3.8 TATTTTGATTGACTTTAAATCA
Position: -234
Score: 3.5
Sequence: AATTGTGATCCCGCCTGAATTC
Position: -71
Score: 3.6
Sequence: TTTTGCTATCAAGTTATCAAAA
Locus tag: SARI_01358
SARI_01358 -234 3.5 AATTGTGATCCCGCCTGAATTC
-71 3.6 TTTTGCTATCAAGTTATCAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydcI
Ortholog function: putative transcriptional regulators, LysR family
Escherichia coli str. K-12 substr. MG1655 b1422 -71 3.7 TTTTGCAATCAAGTTATCATAA
Salmonella typhimurium LT2 STM1625 -71 3.6 TTTTGCTATCAGGTTATCAAAA
Citrobacter koseri ATCC BAA-895 CKO_01457 -71 3.6 TTTTGCTATCAGGTTATCAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01950 -75 3.8 TTTTGCTATCTGGTTATCAAAT
Enterobacter sp. 638 Ent638_1964 -71 3.6 TTTTGCTATCAGGTTATCAAAA
Position: -93
Score: 5
Sequence: AAATGAGATGCAGCTCACAAAA
Locus tag: SARI_01459
SARI_01459 -93 5 AAATGAGATGCAGCTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sotB
Ortholog function: Probable sugar efflux transporter
Escherichia coli str. K-12 substr. MG1655 b1528 -94 4.9 AAACGCGATCCAGATCACAAAT
Salmonella typhimurium LT2 STM1522 -94 4.5 AAATGAGAAGCAGGTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_01548 -94 4.8 TAATGAGACATACATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01628 -94 4.8 AAATGAGACGCAGATCACAAAA
Enterobacter sp. 638 Ent638_2000 -95 4.9 TTTTGAGATCTGCGTCACATAA
Position: -65
Score: 3.8
Sequence: AGTATTGAAGTGTTTCACCATA
Locus tag: SARI_01490
SARI_01490 -65 3.8 AGTATTGAAGTGTTTCACCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mlc
Ortholog function: ROK family transcriptional regulatory protein
Escherichia coli str. K-12 substr. MG1655 b1594 -108 4.1 AAATGTGCTGTTAATCACATGC
Salmonella typhimurium LT2 STM1488 -65 3.8 AGTATTGAAGTGTTTCACCATA
Citrobacter koseri ATCC BAA-895 CKO_01593 -107 3.6 AAaTGTGcagTAaATCACAcgg
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01574 -104 3.8 AAATGTGCGGTAAATCACAAGG
Enterobacter sp. 638 Ent638_1919 -107 3.8 AAATGTGCGGTAAATCACAAGG
Erwinia amylovora ATCC 49946 EAM_1710 -143 4.9 TTATGTGCTGTAAATCACATTC
Yersinia pestis KIM y2110 -146 4.8 TTATGTGCAGCAAATCACATAA
Serratia proteamaculans 568 Spro_2283 -111 4.8 ATTTGTGCAGCAAATCACATAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2258 -226 4.4 ATATGCGCGCTAAATCACATAA
Edwardsiella tarda EIB202 ETAE_1713 -113 4.8 ATTTGTGCACTTAATCACATAA
Proteus mirabilis HI4320 PMI1292 -126 4.7 ATATGTGCTTTCCATCACGATT
Photorhabdus luminescens subsp. laumondii TTO1 plu2226 -119 4.8 TTTCGTGCTGAATATCACATAT
Position: -93
Score: 4
Sequence: TTATCTGATTTTACTCCCACTT
Position: -9
Score: 3.5
Sequence: GAGTGTGATATGCATAAAACCA
Locus tag: SARI_01494
SARI_01494 -93 4 TTATCTGATTTTACTCCCACTT
-9 3.5 GAGTGTGATATGCATAAAACCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydgD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1598 -93 4 TTATCTGATTTTACTCCCACTT
Salmonella typhimurium LT2 STM1484 -93 4 TTATCTGATTTTACTCCCACTT
Citrobacter koseri ATCC BAA-895 CKO_01604 -95 4 TTATCTGATTTTACTCCCACTT
Enterobacter sp. 638 Ent638_1914 -53 4.1 TATTTTAATAGGGTTCACTTTT
Yersinia pestis KIM y2013 -160 3.6 TTTTTTTATTTATAGCACGAAC
Position: -100
Score: 3.9
Sequence: TAGTGCGGCATTAATCACATTA
Locus tag: SARI_01513
SARI_01513 -100 3.9 TAGTGCGGCATTAATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malI
Ortholog function: Maltose regulon regulatory protein MalI (repressor for malXY)
Escherichia coli str. K-12 substr. MG1655 b1620 -104 3.4 TTTAGTGAGGCATAAATCACAT
-102 3.9 TAGTGAGGCATAAATCACATTA
-42 3.9 AAACGTTTTATCTGTCACATAA
Citrobacter koseri ATCC BAA-895 CKO_01626 -103 4 TAGTGCGGCGCAAATCACATTA
-56 3.9 ATAAGTGATTGATAAAACGTTT
-42 3.6 AAACGTTTTATCTGTCACGTTA
Position: -94
Score: 4.2
Sequence: TAATGTGATTAATGCCGCACTA
Locus tag: SARI_01514
SARI_01514 -94 4.2 TAATGTGATTAATGCCGCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malX
Ortholog function: PTS family enzyme IIC/enzyme IIB
Escherichia coli str. K-12 substr. MG1655 b1621 -154 4.1 TTATGTGACAGATAAAACGTTT
-94 4.4 TAATGTGATTTATGCCTCACTA
Enterobacter sp. 638 Ent638_1827 -96 4.2 GAATGTGATTCAGAGCGCACTA
Position: -56
Score: 3.6
Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: SARI_01603
SARI_01603 -56 3.6 TTGTGTAATACTTGTAACGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpp
Ortholog function: major outer membrane lipoprotein
Escherichia coli str. K-12 substr. MG1655 b1677 -56 3.6 TTGTGTAATACTTGTAACGCTA
Salmonella typhimurium LT2 STM1377 -56 3.6 TTGTGTAATACTTGTAACGCTA
Citrobacter koseri ATCC BAA-895 CKO_01710 -56 3.6 TTGTGTAATACTTGTAACGCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02134 -56 3.6 TTGTGTAATACTTGTAACGCTA
Enterobacter sp. 638 Ent638_1767 -56 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia amylovora ATCC 49946 EAM_1656 -56 3.6 TTGTGTAATACTTGTAACGCTA
Serratia proteamaculans 568 Spro_2186 -55 3.6 TTGTGTAATACTTGTAACGCTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1866 -56 3.6 TTGTGTAATACTTGTAACGCTA
Edwardsiella tarda EIB202 ETAE_1852 -55 3.6 TTGTGTAATACTTGTAACGCTA
Proteus mirabilis HI4320 PMI1409 -200 4.4 TTTTGTGAAATAACACGCATTT
Position: -106
Score: 3.6
Sequence: AGGGGTGACACGCCTCGCACTT
Position: -64
Score: 4
Sequence: TATCGTGATGCCCATCACTTCC
Locus tag: SARI_01622
SARI_01622 -106 3.6 AGGGGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroH
Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase
Escherichia coli str. K-12 substr. MG1655 b1704 -106 4.3 AGGTGTGACACACCTCGCACTT
-64 4 TATCGTGATGCGCATCACTTCC
Salmonella typhimurium LT2 STM1347 -106 4.3 AGGTGTGACACGCCTCGCACTT
-64 4 TATCGTGATGCCCATCACTTCC
Citrobacter koseri ATCC BAA-895 CKO_01728 -115 4.3 AGGTGTGAAACGCCTCGCATTT
-64 4.3 TATTGTGATGCCCATCACTTCC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02162 -63 4 TATCGTGATGCGCATCACTTCC
Enterobacter sp. 638 Ent638_1743 -126 3.6 AGTTATGATCGCTTTCACTCTC
-62 3.6 TAAGGTGATGCCCATCACTTCC
Yersinia pestis KIM y1928 -64 4.3 TATTGTGATCGCCATCACTTCC
Serratia proteamaculans 568 Spro_2172 -135 3.9 TTTTGTGCTTTTTTTAGCGATT
-64 4.3 TATTGTGATCGCCATCACTTCC
Edwardsiella tarda EIB202 ETAE_1792 -63 4 TATCGTGATCCCCATCACTTCC
Proteus mirabilis HI4320 PMI1423 -55 3.9 TATTGTGATCTTAATCACTGGG
Photorhabdus luminescens subsp. laumondii TTO1 plu2630 -62 3.8 TATTGTAATTTCCATTATCTAT
Position: -91
Score: 3.8
Sequence: ATATAAGAACCAGCTCACAGTT
Locus tag: SARI_01656
SARI_01656 -91 3.8 ATATAAGAACCAGCTCACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tcyP
Ortholog function: L-cystine uptake protein TcyP
Escherichia coli str. K-12 substr. MG1655 b1729 -90 3.9 ATATAAGAGCCAGCTCACAGTT
Salmonella typhimurium LT2 STM1320 -91 3.9 ATATAAGAGCCAGCTCACAGTT
Citrobacter koseri ATCC BAA-895 CKO_01755 -90 3.7 ATATAAGAGGTCGGTCACAGTT
Yersinia pestis KIM y1878 -166 3.6 TGATTTGATTTAATACAAATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2410 -176 3.7 TGACGTTATCTGCTGCACCCAT
Position: -188
Score: 3.9
Sequence: AAATGTGAGGGGGGTCATAACG
Locus tag: SARI_01666
SARI_01666 -188 3.9 AAATGTGAGGGGGGTCATAACG
Supported by regulated orthologs from reference regulons
Ortholog gene name: chbB
Ortholog function: N,N'-diacetylchitobiose-specific PTS system , EIIB component
Escherichia coli str. K-12 substr. MG1655 b1738 -201 3.7 AAATGTGAAGAGGGTCATAACC
Citrobacter koseri ATCC BAA-895 CKO_01763 -188 4.1 AAATGTGAGAGGGGTCATAACA
Enterobacter sp. 638 Ent638_1706 -129 3.9 AATTTTGATTAACCGCGAATTA
Position: -225
Score: 3.6
Sequence: TTTTCTGAGCATATTCTCAGTA
Position: -55
Score: 3.8
Sequence: TATTCTGATAACACGCAAATAT
Locus tag: SARI_01680
SARI_01680 -225 3.6 TTTTCTGAGCATATTCTCAGTA
-55 3.8 TATTCTGATAACACGCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gdhA
Ortholog function: NADP-specific glutamate dehydrogenase (EC 1.4.1.4)
Escherichia coli str. K-12 substr. MG1655 b1761 -106 3.5 TTTCTTGCTTACCGTCACATTC
Salmonella typhimurium LT2 STM1299 -107 3.6 TTTCTTGCTTACCGTCACATTG
-55 3.6 TATTCTGATAAAACGCAAATAC
Citrobacter koseri ATCC BAA-895 CKO_01789 -107 3.4 TTTCTTGCTTACCGTCACACTG
Enterobacter sp. 638 Ent638_1685 -110 3.3 AATTTTCACTTGCCTCGCAAAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0051 -234 3.6 TTTTGTTATATAACAAAAACTT
Proteus mirabilis HI4320 PMI3008 -195 3.4 AATCCTGATTTTATTAGCCTTT
-88 3.5 AAACAATATCAACCTCACATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0122 -92 3.5 AAACACAACTTACCTCACATTT
Position: -137
Score: 4.7
Sequence: TAATGTGACATCAGTCACGATT
Locus tag: SARI_01688
SARI_01688 -137 4.7 TAATGTGACATCAGTCACGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: msrB
Ortholog function: methionine sulfoxide reductase B
Escherichia coli str. K-12 substr. MG1655 b1778 -137 5.2 AAATGTGATTTTCATCACGATT
Salmonella typhimurium LT2 STM1291 -107 4.7 TAATGTGACATCAGTCACGATT
Citrobacter koseri ATCC BAA-895 CKO_01799 -107 4.9 AAACGTGATTCCGATCACGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01198 -135 5.1 AAACGTGATTTAAGTCACAATT
Enterobacter sp. 638 Ent638_1676 -137 5.2 ATATGTGAGAAAGATCACAATT
Erwinia amylovora ATCC 49946 EAM_1930 -137 5.2 AATGGTGATCTGCATCACAATT
Yersinia pestis KIM y2164 -85 5.1 ATTTGCGATTTTTATCACATTT
Serratia proteamaculans 568 Spro_2727 -143 5.7 ATATGTGATCGGTATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2343 -135 5.6 TTATGTGATACACATCACAATT
Edwardsiella tarda EIB202 ETAE_1484 -91 4.9 GTTTGTGATGCTCATCACAAAA
Proteus mirabilis HI4320 PMI1503 -137 5.3 TTATGTGAAATGTATCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2557 -267 4.6 ATATGCGAGTCACATCACAATA
Position: -226
Score: 4.8
Sequence: AATCGTGACTGATGTCACATTA
Locus tag: SARI_01689
SARI_01689 -226 4.8 AATCGTGACTGATGTCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gapA
Ortholog function: glyceraldehyde-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b1779 -226 5.3 AATCGTGATGAAAATCACATTT
Salmonella typhimurium LT2 STM1290 -226 4.8 AATCGTGACTGATGTCACATTA
Citrobacter koseri ATCC BAA-895 CKO_01800 -226 5 AATCGTGATCGGAATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01197 -225 5.2 AATTGTGACTTAAATCACGTTT
Enterobacter sp. 638 Ent638_1675 -225 5.7 AATTGTGATCTTTCTCACATAT
Erwinia amylovora ATCC 49946 EAM_1931 -215 5.4 AATTGTGATGCAGATCACCATT
Yersinia pestis KIM y2165 -218 5.1 AAATGTGATAAAAATCGCAAAT
Serratia proteamaculans 568 Spro_2728 -227 5.6 ATATGTGATACCGATCACATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2344 -235 5.8 AATTGTGATGTGTATCACATAA
Edwardsiella tarda EIB202 ETAE_1483 -227 5.1 TTTTGTGATGAGCATCACAAAC
Proteus mirabilis HI4320 PMI1504 -226 5.6 AAATGTGATACATTTCACATAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2558 -224 5.4 TATTGTGATGTGACTCGCATAT
Position: -97
Score: 4.3
Sequence: AAAGGTGATAAACATCACAGAC
Locus tag: SARI_01707
SARI_01707 -97 4.3 AAAGGTGATAAACATCACAGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yeaQ
Ortholog function: Transglycosylase associated protein
Escherichia coli str. K-12 substr. MG1655 b1795 -98 4.2 CTCCGTGATGCTCGTCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_01818 -97 4.9 AAAAGTGACATTTATCACAAAT
Enterobacter sp. 638 Ent638_1658 -245 3.7 CAATGTGAGCAATGTCGTACTA
-101 4.8 CACTGTGATACCTATCACAAAT
Position: -138
Score: 3.7
Sequence: TTACATGAAAAATAACACATTT
Position: -81
Score: 4.2
Sequence: GTGAGTGACGCCGATCACATTT
Locus tag: SARI_01777
SARI_01777 -138 3.7 TTACATGAAAAATAACACATTT
-81 4.2 GTGAGTGACGCCGATCACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycfR
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1112 -114 3.7 ATTAATGATTGTTATAAAAAAT
-87 4.8 GTATGTGATCCAGATCACATCT
Salmonella typhimurium LT2 STM1214 -88 4.7 ACGTGTGATGTAGATCACATCT
Citrobacter koseri ATCC BAA-895 CKO_01942 -113 3.8 TATAATGATCGTTATAAAAAAA
-86 4.5 ACGTGTGACCTGGATCACATCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01110 -95 4.9 ACGTGTGACATAGATCACATTA
Enterobacter sp. 638 Ent638_1627 -91 4.7 ACGTGTGATGCAGATCACATCT
Serratia proteamaculans 568 Spro_4435 -116 3.7 TTATTTGATAAAGATTATCAAA
Position: -101
Score: 4.4
Sequence: AAATGTGATCGGCGTCACTCAC
Locus tag: SARI_01778
SARI_01778 -101 4.4 AAATGTGATCGGCGTCACTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycfQ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1111 -175 5.3 AGATGTGATCTGGATCACATAC
Salmonella typhimurium LT2 STM1213 -175 4.7 AGATGTGATCTACATCACACGT
Citrobacter koseri ATCC BAA-895 CKO_01943 -227 4.4 AGATGTGATCCAGGTCACACGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01109 -227 4.8 TAATGTGATCTATGTCACACGT
Enterobacter sp. 638 Ent638_1626 -174 4.6 AGATGTGATCTGCATCACACGT
Position: -127
Score: 4.1
Sequence: AAACTTGATGCACATCAATTTT
Locus tag: SARI_01780
SARI_01780 -127 4.1 AAACTTGATGCACATCAATTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Escherichia coli str. K-12 substr. MG1655 b1109 -154 3.9 AAACTTGATTAACATCAATTTT
Salmonella typhimurium LT2 STM1211 -154 4.1 AAACTTGATGCACATCAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01106 -152 4.1 AAACTTGATGCACATCAATTTT
Enterobacter sp. 638 Ent638_1624 -153 4 AAACTTGATTCATATCAATTTT
Erwinia amylovora ATCC 49946 EAM_1473 -55 3.7 TAAGGTTATTTTATTAACCTTT
Yersinia pestis KIM y1777 -152 3.8 AAAGTTGATATATATCAATTTT
Serratia proteamaculans 568 Spro_1926 -153 4.3 AAGTTTGATGTACATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1815 -153 4 TAAATTGATATATATCAATTTT
Edwardsiella tarda EIB202 ETAE_2070 -166 4.3 TTATTTGATTTGAATCAATTTT
Proteus mirabilis HI4320 PMI0875 -157 4.6 TTTTTTGATATAAATCAACTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu2821 -154 3.8 GAATTTGATGTTGTTCAATTTT
Position: -228
Score: 4.2
Sequence: TTTTATTATATATTTAACAATT
Locus tag: SARI_01856
SARI_01856 -228 4.2 TTTTATTATATATTTAACAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: csgD
Ortholog function: DNA-binding transcriptional activator in two-component regulatory system
Escherichia coli str. K-12 substr. MG1655 b1040 -201 3.9 TTTAGTTACATGTTTAACACTT
-134 3.3 TAGTTTTATATTTTACCCATTT
Salmonella typhimurium LT2 STM1142 -202 3.4 TTTGGTTACAAGTTTAACACTT
Citrobacter koseri ATCC BAA-895 CKO_02029 -207 4.1 TTTTGTTACAAGTTTAACACTT
Position: -40
Score: 4.2
Sequence: AAATGTGTGCGCGTTCTCATTA
Locus tag: SARI_01859
SARI_01859 -40 4.2 AAATGTGTGCGCGTTCTCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycdZ
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b1036 -52 4 AAATGTGTGCTCGATCTCATTC
-50 3.7 ATGTGTGCTCGATCTCATTCAT
Citrobacter koseri ATCC BAA-895 CKO_02033 -40 3.9 AAATGTGTGCGTGATCTCATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01059 -52 4.1 TACTGTGTTTTAGATCGCATTC
Serratia proteamaculans 568 Spro_3290 -125 4.2 TTTTGTGACAAATTCCACATCT
-96 3.6 TATCTTGTTTCTCATTACATAT
-73 4.6 TTATGTGAAATACATCACATGA
Edwardsiella tarda EIB202 ETAE_2360 -124 4.3 AAGTGTGATTGATGTCACTTTG
-72 3.6 CGGTGTGATGTCCATCAATGAA
Proteus mirabilis HI4320 PMI3124 -240 3.7 ATTAATAATATATATCAAACAA
Position: -203
Score: 3.6
Sequence: AAATGTGAGAGAGTGCAACCTG
Locus tag: SARI_01877
SARI_01877 -203 3.6 AAATGTGAGAGAGTGCAACCTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: putP
Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1)
Escherichia coli str. K-12 substr. MG1655 b1015 -207 3.6 AAATGTGAGAGAGTGCAACCTG
Salmonella typhimurium LT2 STM1125 -204 3.6 AAATGTGAGAGAGTGCAACCTG
Citrobacter koseri ATCC BAA-895 CKO_02041 -80 3.6 AAATGTGAGAGAGTGCAACCTG
Enterobacter sp. 638 Ent638_1542 -249 3.7 TTTTATGCGGCACTTAACACTT
Serratia proteamaculans 568 Spro_2930 -211 3.9 AAATGTGACGCAGGGTAAACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4218 -130 3.7 TTGTGCAACCTTGTTAACAAAT
Proteus mirabilis HI4320 PMI1615 -220 3.8 TAGTGTGAAGTTACATACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1958 -243 4.4 AAATGTGATTCAGTAAACGTTT
Position: -163
Score: 4.2
Sequence: ATGTCTGACAGAGTTCACACTT
Locus tag: SARI_01940
SARI_01940 -163 4.2 ATGTCTGACAGAGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompA
Ortholog function: outer membrane protein A
Escherichia coli str. K-12 substr. MG1655 b0957 -188 4 ATGCCTGACGGAGTTCACACTT
Salmonella typhimurium LT2 STM1070 -188 4.3 ATGTCTGACGGAGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02111 -164 4 ATGCCTGACGGAGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00986 -185 3.9 ATGCCTGACAGAGTTCACACTT
Enterobacter sp. 638 Ent638_1469 -189 4 ATGCCTGACGGAGTTCACACTT
Serratia proteamaculans 568 Spro_1754 -195 3.8 TTTTTAGAGCTTTATCACATCA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1751 -200 3.9 TCTTATGACACAAATCACATCA
Edwardsiella tarda EIB202 ETAE_1267 -196 3.7 TTTGGTGAGCATAATCACATCG
Position: -245
Score: 4.8
Sequence: AAGTTTGATGTGGTTCACAAAG
Locus tag: SARI_01961
SARI_01961 -245 4.8 AAGTTTGATGTGGTTCACAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompF
Ortholog function: Outer membrane protein F precursor
Salmonella typhimurium LT2 STM0999 -245 4.5 AAGTTTGACGTTGTTCACAAAG
Enterobacter sp. 638 Ent638_1448 -245 4.6 AAATTTGAGGTGGTTCACAAAG
Position: -195
Score: 4
Sequence: TTTTTTGTTGCACCTTACATTT
Locus tag: SARI_01979
SARI_01979 -195 4 TTTTTTGTTGCACCTTACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycaI
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM0983 -120 4.1 TTTTTTGCTGCGTCTTACATTT
Proteus mirabilis HI4320 PMI0717 -212 3.6 TTACGTGATCTTTCTCTATTTG
-152 3.6 TTTTTAGAACAACTTCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1629 -230 3.7 ATTTGATATCAGTATCGCAATG
-152 4.4 ATTTGCGAAGCTGTTCGCATAT
Position: -142
Score: 3.5
Sequence: TTGTGAGACGCACGCCGCATTT
Locus tag: SARI_01986
SARI_01986 -142 3.5 TTGTGAGACGCACGCCGCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serC
Ortholog function: Phosphoserine aminotransferase (EC 2.6.1.52)
Escherichia coli str. K-12 substr. MG1655 b0907 -155 4.8 TTGTGTGATGCAAGCCACATTT
Salmonella typhimurium LT2 STM0977 -142 4.2 TTGTGTGACGCATGCCGCATTT
Citrobacter koseri ATCC BAA-895 CKO_02165 -171 4.6 TTGTGTGACGTAGCGCGCATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00935 -145 3.7 TTGTGTGACGGCGGCCGCGTTT
Enterobacter sp. 638 Ent638_1427 -119 4.4 TTGTGTGACGGTGGACACATTT
Yersinia pestis KIM y2784 -39 3.3 TATAACGATGGCAATCTCAGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2594 -78 3.5 AAGTATGACGGGTATAAAAATG
Proteus mirabilis HI4320 PMI0711 -119 3.5 TATTTTTGTGTGCTACACATAA
Position: -239
Score: 3.8
Sequence: ATTTGTTAATTACTCCATATTA
Position: -78
Score: 4.3
Sequence: AGATATGATCCATATCAAATTC
Locus tag: SARI_01989
SARI_01989 -239 3.8 ATTTGTTAATTACTCCATATTA
-78 4.3 AGATATGATCCATATCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: focA
Ortholog function: formate transporter
Escherichia coli str. K-12 substr. MG1655 b0904 -156 3.6 TATTTTTATTTGGATAATCAAA
-78 3.8 AGATATGATCTATATCAATTTC
Salmonella typhimurium LT2 STM0974 -78 4.4 AGATATGATCTATATCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_02167 -198 3.6 TATTTTTATTTGGATAATCAAA
-120 4.4 AGATATGATCTATATCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00932 -121 3.8 AGATATGATCTATATCAATTTC
Enterobacter sp. 638 Ent638_1424 -78 3.8 AGATATGATCTATATCAATTTC
Yersinia pestis KIM y2789 -84 4 CAATATGATCCATATCAATTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2596 -79 4.5 CAATATGATCCACATCAAATTT
Proteus mirabilis HI4320 PMI0706 -188 4 TTTTTTGATAAAATTTAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1614 -88 4.7 AATTATGATCTATATCAAATTC
Position: -29
Score: 4.2
Sequence: AAATTTGAACTTCCTCACGGTT
Locus tag: SARI_01995
SARI_01995 -29 4.2 AAATTTGAACTTCCTCACGGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycaD
Ortholog function: Hypothetical MFS-type transporter protein ycaD
Escherichia coli str. K-12 substr. MG1655 b0898 -29 4.2 AAATTTGAACTTCCTCACGGTT
Salmonella typhimurium LT2 STM0968 -29 4.2 AAATTTGAACTTCCTCACGGTT
Citrobacter koseri ATCC BAA-895 CKO_02171 -29 4.2 AAATTTGAACTTCCTCACGGTT
Position: -164
Score: 4
Sequence: AAATTTGAAGCAGTTAACGCTA
Position: -135
Score: 3.8
Sequence: GAATGTGACAGATGTCGCGAAT
Position: -104
Score: 3.6
Sequence: AGATGTTAGTTATCTATCAATT
Locus tag: SARI_02017
SARI_02017 -164 4 AAATTTGAAGCAGTTAACGCTA
-135 3.8 GAATGTGACAGATGTCGCGAAT
-104 3.6 AGATGTTAGTTATCTATCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: clpS
Ortholog function: ATP-dependent Clp protease adaptor protein
Escherichia coli str. K-12 substr. MG1655 b0881 -164 4 AAATTTGAAGCAGTTAACGCTA
Salmonella typhimurium LT2 STM0944 -164 4 AAATTTGAAGCAGTTAACGCTA
-104 3.6 AGATGTTAGTTATCTATCAATT
Citrobacter koseri ATCC BAA-895 CKO_02199 -164 4 AAATTTGAAGCAGTTAACGCTA
-135 4.2 TAATGTGACAGATGTCGCGGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00914 -167 4 AAATTTGAAGCAGTTAACGCTA
-77 4.3 ATTTGTGATGAGCATAACCTCT
Enterobacter sp. 638 Ent638_1398 -161 3.9 ATTTTTGAAGCAGTTAACGCTA
-132 3.8 GAATGTGACAGATATCGCGGAT
Erwinia amylovora ATCC 49946 EAM_1320 -161 4 AAATTTGAAGCAGTTAACGCTA
-132 4.5 TTTTGTGATAGAGGTCGCTATT
Serratia proteamaculans 568 Spro_1673 -176 3.6 AAGTTTGAAGCAGGTAACGCTA
Edwardsiella tarda EIB202 ETAE_2208 -164 3.8 AAGTTTGAGGCAGTTAACGCAA
-144 3.6 AATTGTGCGGCAGTGCGCTTTT
Proteus mirabilis HI4320 PMI0689 -268 3.7 TGTCTTTATTTACTTAACATTA
-148 4.1 AACTTTGATGTAGCTAACGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1593 -170 4.3 AAGTTTGATATAGATAACGATA
Position: -210
Score: 3.9
Sequence: ATTCGCGACATCTGTCACATTC
Position: -181
Score: 4
Sequence: TAGCGTTAACTGCTTCAAATTT
Locus tag: SARI_02018
SARI_02018 -210 3.9 ATTCGCGACATCTGTCACATTC
-181 4 TAGCGTTAACTGCTTCAAATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspD
Ortholog function: cold shock-like protein
Escherichia coli str. K-12 substr. MG1655 b0880 -180 4 TAGCGTTAACTGCTTCAAATTT
Salmonella typhimurium LT2 STM0943 -181 4 TAGCGTTAACTGCTTCAAATTT
Citrobacter koseri ATCC BAA-895 CKO_02200 -210 3.9 ATCCGCGACATCTGTCACATTA
-181 4 TAGCGTTAACTGCTTCAAATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00913 -270 4.2 AGAGGTTATGCTCATCACAAAT
-180 4 TAGCGTTAACTGCTTCAAATTT
Enterobacter sp. 638 Ent638_1397 -209 3.8 ATCCGCGATATCTGTCACATTC
-180 3.9 TAGCGTTAACTGCTTCAAAAAT
Serratia proteamaculans 568 Spro_1672 -205 4 TAGCGTTACCTGCTTCAAACTT
-49 3.9 TTCAGTTATTCATCTCACCTAA
Proteus mirabilis HI4320 PMI0688 -163 3.8 AAGCGTTAGCTACATCAAAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu1592 -194 4.6 TATCGTTATCTATATCAAACTT
Position: -21
Score: 4.4
Sequence: GAATTTGAAGTGGATCACAAAA
Locus tag: SARI_02083
SARI_02083 -21 4.4 GAATTTGAAGTGGATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_02295
Ortholog function: hypothetical protein
Citrobacter koseri ATCC BAA-895 CKO_02295 -218 3.9 TTTTGTTATCTCATTGAAAATT
-104 4.1 TTTTGTGCAAGTTTTCTCATTA
Citrobacter koseri ATCC BAA-895 CKO_02295 -218 3.9 TTTTGTTATCTCATTGAAAATT
-104 4.1 TTTTGTGCAAGTTTTCTCATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00854 -103 3.9 TGAAATGAGCGAGATCGCATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00854 -103 3.9 TGAAATGAGCGAGATCGCATAT
Enterobacter sp. 638 Ent638_1314 -122 4.1 TTTTGTGCAAGCTTTCTCATAA
Enterobacter sp. 638 Ent638_1314 -122 4.1 TTTTGTGCAAGCTTTCTCATAA
Yersinia pestis KIM y3231 -299 5.4 TAATGTGACTTTGTTCACATTA
-122 3.8 TTCTTTGAAAGAATTCTCATAA
-21 4.9 TAATTTGAGGGAGATCACAAAA
Yersinia pestis KIM y3231 -299 5.4 TAATGTGACTTTGTTCACATTA
-122 3.8 TTCTTTGAAAGAATTCTCATAA
-21 4.9 TAATTTGAGGGAGATCACAAAA
Serratia proteamaculans 568 Spro_3600 -130 3.7 AAACGTGGTTTTTTGCAAAAAT
-21 4.6 AAATTTGAAGGAGATCACAGAA
Serratia proteamaculans 568 Spro_3600 -130 3.7 AAACGTGGTTTTTTGCAAAAAT
-21 4.6 AAATTTGAAGGAGATCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1966 -21 4.8 AAAAGTGAACGGGATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1966 -21 4.8 AAAAGTGAACGGGATCACAAAA
Position: -149
Score: 3.9
Sequence: AGATGTGTATGAAATCACGTTT
Locus tag: SARI_02086
SARI_02086 -149 3.9 AGATGTGTATGAAATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiT
Ortholog function: ABC transporter ATP-binding protein
Escherichia coli str. K-12 substr. MG1655 b0820 -124 4.4 AGATGTGTACGAAATCACATTT
Salmonella typhimurium LT2 STM0838 -124 4 AGATGTGTACGAAATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_02298 -148 4.4 AGATGTGTACGAAATCACATTT
Enterobacter sp. 638 Ent638_1311 -125 4.4 AGATGTGTACGAAATCACATTT
Yersinia pestis KIM y2677 -295 3.9 TATCGTTATACCCGTCATACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3010 -41 4 TAATGCGCGCCAAATCACATTC
Edwardsiella tarda EIB202 ETAE_2518 -40 4.8 TAATGTGAACAAAATCACGTTA
Position: -124
Score: 4.7
Sequence: TTTTGTGATGCGGCGCATAAAT
Locus tag: SARI_02108
SARI_02108 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiH
Ortholog function: putative transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b0796 -123 4.5 TTTTGTGACGCAGCGCATAAAT
Salmonella typhimurium LT2 STM0819 -124 4.7 TTTTGTGATGCGGCGCATAAAT
Citrobacter koseri ATCC BAA-895 CKO_02331 -124 4.5 TTTTGTGACATACCGCATAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00824 -224 3.6 AAATGAAACGGTATTCAAAAAA
-118 4.7 AATTGTTAAGCCCATCACAAAT
Enterobacter sp. 638 Ent638_1287 -126 4.4 TTTTGTGACACGGCGCATAAAA
Serratia proteamaculans 568 Spro_1330 -146 4.6 TTAAGTGACGCAGAGCACAATA
Proteus mirabilis HI4320 PMI0619 -160 3.6 AATTTTTAAATAAATCATGTTT
Position: -68
Score: 3.8
Sequence: TAGTGTAGTCGTCGTCACAAAA
Locus tag: SARI_02113
SARI_02113 -68 3.8 TAGTGTAGTCGTCGTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybhQ
Ortholog function: putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b0791 -98 3.9 TAGTGTAGTCGGCGTCACAAAA
Salmonella typhimurium LT2 STM0814 -98 3.8 TAGTGTAGTCGTCGTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_02336 -153 3.8 TAGTGTAGTCGTCGTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00819 -97 3.8 TAGTGTAGTAGACGTCACAAAA
Enterobacter sp. 638 Ent638_1282 -98 3.9 AAGTGTAGTCGGCGTCACAAAA
Position: -181
Score: 3.8
Sequence: AAACGTGATTGCTGACGCAGTA
Locus tag: SARI_02136
SARI_02136 -181 3.8 AAACGTGATTGCTGACGCAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hutU
Ortholog function: urocanate hydratase
Citrobacter koseri ATCC BAA-895 CKO_02357 -123 3.8 AAGCGTGATTGCTGACGCAATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00795 -124 4 AAACGTGATTGCTGACGCAATA
Enterobacter sp. 638 Ent638_1263 -120 4 AAGCGTGATAGCTAACGCAATA
Erwinia amylovora ATCC 49946 EAM_1253 -121 3.8 TTTTGTGACAAAGCTGGCACAA
Yersinia pestis KIM y4038 -261 4.9 ATATGTGATTTGGTGCGCAAAT
Serratia proteamaculans 568 Spro_0805 -196 4.8 TATTGTGATTTGACGCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3193 -203 4.7 ATTTGTGATTATAAACACAAAA
Position: -298
Score: 4
Sequence: TAAATTGCTCAGGATCAAATTT
Position: -253
Score: 3.6
Sequence: TAAATTGATCACTGTCGAAAAA
Locus tag: SARI_02196
SARI_02196 -298 4 TAAATTGCTCAGGATCAAATTT
-253 3.6 TAAATTGATCACTGTCGAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cydA
Ortholog function: cytochrome d terminal oxidase, polypeptide subunit I
Salmonella typhimurium LT2 STM0740 -256 3.7 TAAATTGATCGCTGTCGAAAAA
Position: -300
Score: 4.2
Sequence: TATCGTGACCTGCGTCACTGTT
Locus tag: SARI_02216
SARI_02216 -300 4.2 TATCGTGACCTGCGTCACTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Enterobacter sp. 638 Ent638_1222 -295 4.2 TATCGTGACTGTGATCACTGTT
Erwinia amylovora ATCC 49946 EAM_1168 -249 4.4 AAGTGTGATTTTTGTCACTGTT
-190 3.6 TAATGAGATTGTGATCCACTTA
Yersinia pestis KIM y3071 -254 4.5 AATCGTGATCCTAATCACTGTT
Serratia proteamaculans 568 Spro_1263 -253 4.3 ATCCGTGATCTAAATCACTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1357 -265 4.7 ATTCGTGATCTAAATCACTGTT
Edwardsiella tarda EIB202 ETAE_2588 -261 3.7 ATGCGTGACCGTTGTCACTGTT
Proteus mirabilis HI4320 PMI0565 -264 4.3 AAAAGTGATCCCTCTCACTGTT
Position: -177
Score: 4.9
Sequence: TTTAGTGATTATAATCACAAAT
Locus tag: SARI_02256
SARI_02256 -177 4.9 TTTAGTGATTATAATCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagE
Ortholog function: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b0679 -176 4.4 TTTGGTGACAAAACTCACAAAA
-142 4.2 ATTTGCGATACGAATTAAATTT
Salmonella typhimurium LT2 STM0685 -177 4.8 TTTAGTGATTATAATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_02485 -181 4.9 TTTGGTGATTCAAATCACAAAA
-147 3.6 ATTTGCGATACGAATTAATTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00700 -153 4.7 TTTGGTGATAATTATCACAAAA
-119 3.6 ATTTGCGATACGAATTAATTTT
Erwinia amylovora ATCC 49946 EAM_1148 -161 4.8 TAAGGTGACTTTAATCACATAT
Serratia proteamaculans 568 Spro_1228 -162 5.1 TTTGGTGATGTAAATCACAAAA
-44 3.9 AAATATGATAAAGCTCATTAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1318 -200 3.7 AAATTTGAACCCGTTTACTATT
-132 3.9 TATCGCTACAGTGATCACAATT
Position: -171
Score: 4.7
Sequence: ATTTGTGATTATAATCACTAAA
Locus tag: SARI_02257
SARI_02257 -171 4.7 ATTTGTGATTATAATCACTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nagB
Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6)
Escherichia coli str. K-12 substr. MG1655 b0678 -212 4.3 AAATTTAATTCGTATCGCAAAT
-178 4.6 TTTTGTGAGTTTTGTCACCAAA
Salmonella typhimurium LT2 STM0684 -205 3.7 AAAATTAATTCGCCTCGCAAAT
-171 4.7 TTTTGTGATTATAATCACTAAA
Citrobacter koseri ATCC BAA-895 CKO_02486 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 5.2 TTTTGTGATTTGAATCACCAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00699 -217 3.8 AAAATTAATTCGTATCGCAAAT
-183 5 TTTTGTGATAATTATCACCAAA
Enterobacter sp. 638 Ent638_1193 -218 3.8 AAAATTAATTCGTATCGCAAAT
-184 4.6 TTTTGTGAGTTTTGTCACCAAA
Erwinia amylovora ATCC 49946 EAM_1147 -195 4.9 ATATGTGATTAAAGTCACCTTA
Yersinia pestis KIM y1202 -214 5.1 TTTTGTGATAAATATCACCAAA
Serratia proteamaculans 568 Spro_1227 -194 5.3 TTTTGTGATTTACATCACCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1326 -180 5 TTATGTGATAAAAATCACCAAA
Edwardsiella tarda EIB202 ETAE_2617 -190 5 ATTTGTGATAACTATCACCAAT
Proteus mirabilis HI4320 PMI0454 -217 4.9 ATTTGTGATTAAAGTCACCTAT
Position: -87
Score: 4
Sequence: AAATGTTAACAAACACACATAA
Locus tag: SARI_02277
SARI_02277 -87 4 AAATGTTAACAAACACACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnH2
Ortholog function: glutamate and aspartate transporter subunit
Salmonella typhimurium LT2 STM0665 -87 4 AAATGTTAACAAACACACATAA
Position: -92
Score: 4.2
Sequence: AAGTGTGATTTGCGTCCCCATA
Locus tag: SARI_02297
SARI_02297 -92 4.2 AAGTGTGATTTGCGTCCCCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybeD
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b0631 -94 3.6 AAGTGTAATTTCCGTCCCCATA
Salmonella typhimurium LT2 STM0636 -93 4.2 AAGTGTGATTTTCGTCCCCATA
-35 3.9 AGTTGTTATTTTTTTTACGTAA
Citrobacter koseri ATCC BAA-895 CKO_02527 -91 4.4 AAGTGTGATTTCCATCCCCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00663 -97 4.4 AAGTGTGATTTCCATCCCCATA
Enterobacter sp. 638 Ent638_1166 -90 4.4 AAGTGTGATTTCCATCCCCATA
Yersinia pestis KIM y1174 -146 4.2 TATTGTGATTAATCTTATATTG
Position: -114
Score: 4.3
Sequence: TAACGCGATATTTATCACTTTT
Locus tag: SARI_02304
SARI_02304 -114 4.3 TAACGCGATATTTATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cspE
Ortholog function: cold shock protein E
Escherichia coli str. K-12 substr. MG1655 b0623 -114 4 TAACGCGACTTTTATCACTTTT
Salmonella typhimurium LT2 STM0629 -114 4.3 TAACGCGATATTTATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_02534 -21 4.3 TAACGCGATATTTATCACTTTT
Enterobacter sp. 638 Ent638_1159 -114 3.8 TAACGCGACTTTTGTCACTTTT
Erwinia amylovora ATCC 49946 EAM_1116 -113 3.6 AAAAACGATATTTATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1294 -113 3.9 TTTAGCGACTTTTATCACTTTT
Position: -141
Score: 3.8
Sequence: GAATGTGAACTAAATCACTTCA
Locus tag: SARI_02319
SARI_02319 -141 3.8 GAATGTGAACTAAATCACTTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: rnk
Ortholog function: Regulator of nucleoside diphosphate kinase
Escherichia coli str. K-12 substr. MG1655 b0610 -140 3.8 GAATGTGACGCAAATCACTTCA
Salmonella typhimurium LT2 STM0616 -141 3.8 GAATGTGAACTAAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_02549 -141 3.9 GAATGTGAGCTAAATCACTTCA
Enterobacter sp. 638 Ent638_1148 -187 4.1 AAATCTGAGAACGATCACGTTT
-140 3.8 GAATGTGACATTCATCACTTCA
Serratia proteamaculans 568 Spro_4382 -170 3.7 CTTCGTGATCGGGATCTCTTTC
-67 3.8 TTTTGTGCTGTTTTTCCGAATT
Edwardsiella tarda EIB202 ETAE_0492 -145 4.4 ATTTGTGAGCCAGCTCTCTTTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4046 -127 3.7 GTTCGTGATCATGATCTCTTTA
Position: -99
Score: 3.8
Sequence: AATTGAGACTTCCTTCAAACAC
Locus tag: SARI_02440
SARI_02440 -99 3.8 AATTGAGACTTCCTTCAAACAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fsr
Ortholog function: fosmidomycin resistance protein
Escherichia coli str. K-12 substr. MG1655 b0479 -65 3.7 TAGTCTGGTAATAATCACAAAT
Salmonella typhimurium LT2 STM0493 -100 3.8 AATTGAGACTTCCTTCAAACAC
Citrobacter koseri ATCC BAA-895 CKO_02670 -102 3.8 AATTGAGACTTCCTTCAAACAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00460 -197 3.8 AATTGCGACTTCCTTCAAACCT
Enterobacter sp. 638 Ent638_0958 -92 4 AATTGCGACTTTCCTCAAATCT
Serratia proteamaculans 568 Spro_1146 -100 4.7 TTTTGCGATGTGCGTCAAATTA
Position: -97
Score: 4.3
Sequence: AACAGTGACAGAGATCACATAC
Locus tag: SARI_02462
SARI_02462 -97 4.3 AACAGTGACAGAGATCACATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: maa
Ortholog function: maltose O-acetyltransferase
Escherichia coli str. K-12 substr. MG1655 b0459 -97 4.8 CTATGTGATCTTTATCACACAG
Salmonella typhimurium LT2 STM0472 -97 4.7 AACAGTGATATAGATCACATAG
Citrobacter koseri ATCC BAA-895 CKO_02692 -101 4.6 TCTCGTGATTTAGATCACATCA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00440 -100 4.7 CTTTGTGATAGACATCACATCA
Enterobacter sp. 638 Ent638_0939 -98 4.3 TGCTGTGACTCTGATCACATCA
Position: -100
Score: 4.1
Sequence: ATAAGTGACATGTGCCACACTT
Locus tag: SARI_02468
SARI_02468 -100 4.1 ATAAGTGACATGTGCCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybaY
Ortholog function: Glycoprotein-polysaccharide metabolism
Escherichia coli str. K-12 substr. MG1655 b0453 -101 4.3 ATGCGTGATGTGTGCCACACTT
Salmonella typhimurium LT2 STM0465 -100 3.9 ATGAGTGACATGTGCCACACTT
Citrobacter koseri ATCC BAA-895 CKO_02705 -102 4 ATAAGTGAGATATGCCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00416 -99 3.8 ATCTGAGATCTGTGCCACACTT
Enterobacter sp. 638 Ent638_0921 -96 4.3 ATAAGTGATATGTGCCACACTT
Position: -136
Score: 3.7
Sequence: AAGTGTGGCACATGTCACTTAT
Locus tag: SARI_02469
SARI_02469 -136 3.7 AAGTGTGGCACATGTCACTTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tesB
Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-)
Escherichia coli str. K-12 substr. MG1655 b0452 -138 3.9 AAGTGTGGCACACATCACGCAT
Citrobacter koseri ATCC BAA-895 CKO_02706 -135 3.9 AAGTGTGGCATATCTCACTTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00415 -139 3.8 AAGTGTGGCACAGATCTCAGAT
Enterobacter sp. 638 Ent638_0920 -131 4 AAGTGTGGCACATATCACTTAT
Yersinia pestis KIM y1043 -153 3.6 TAGCGTGCTAATTATAGCATAA
Serratia proteamaculans 568 Spro_1111 -54 3.6 TGCCGTGATATTCCGCACACTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1162 -154 3.7 TAGTATGATTCAATAAACACAA
Position: -135
Score: 5.3
Sequence: ATGTGTGATCGTCATCACAAAA
Locus tag: SARI_02824
SARI_02824 -135 5.3 ATGTGTGATCGTCATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hpt
Ortholog function: hypoxanthine phosphoribosyltransferase
Escherichia coli str. K-12 substr. MG1655 b0125 -147 5.3 ATGTGTGATCGTCATCACAATT
Salmonella typhimurium LT2 STM0170 -147 5.3 ATGTGTGATCGTCATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03242 -135 5.3 AAGTGTGATCGTCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00133 -134 5.4 AAGTGTGATCGGAATCACAAAT
Enterobacter sp. 638 Ent638_0673 -180 3.6 AATTTTGATAGCAATTAATTAT
-148 5.4 AAGTGTGATCGGAATCACAAAT
Proteus mirabilis HI4320 PMI0160 -154 3.6 TACTGTAATAAGTAACAAAATT
Photorhabdus luminescens subsp. laumondii TTO1 plu0860 -144 4 AATTCTGATATGCTTTGCAAAA
Position: -108
Score: 4.3
Sequence: TAGTTTGAGCCAGCTCACCAAA
Locus tag: SARI_02832
SARI_02832 -108 4.3 TAGTTTGAGCCAGCTCACCAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: lacZ
Ortholog function: beta-D-galactosidase
Escherichia coli str. K-12 substr. MG1655 b0344 -110 4.7 TAATGTGAGTTAGCTCACTCAT
Citrobacter koseri ATCC BAA-895 CKO_02825 -110 4.4 TTGTGTGAGTCAGTTCACTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_pKPN3p05871 -109 4.6 TAATGTGAGTCAGCTCACTCAT
Enterobacter sp. 638 Ent638_0928 -100 4.4 TTTTGTGATCGACTTCGCTTTG
Erwinia amylovora ATCC 49946 EAM_0926 -94 3.8 TGTTGCGATAGCCATCACATCC
Yersinia pestis KIM y1817 -168 4 ACATGTGCGACAGATCACATTC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1490 -149 4.1 CTTTGTGATCGCTTCCACTTTA
-92 4.5 ATATGTTATGGAAAACACAAAT
Position: -150
Score: 4.1
Sequence: TTTTGTGAGGTTATTAGCGAAA
Position: -122
Score: 3.7
Sequence: ATTCGTGATCCGTTTATTGTTT
Locus tag: SARI_02839
SARI_02839 -150 4.1 TTTTGTGAGGTTATTAGCGAAA
-122 3.7 ATTCGTGATCCGTTTATTGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: lpdA
Ortholog function: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
Escherichia coli str. K-12 substr. MG1655 b0116 -224 3.3 AATTGTTAACAATTTTGTAAAA
Salmonella typhimurium LT2 STM0154 -153 3.5 GTTTGTGAGGTTATTAGCGAAA
Citrobacter koseri ATCC BAA-895 CKO_03256 -95 3.3 AATTGTTAACAATTTTGTAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00120 -105 3.3 AATTGTTAACAATTTTGTAAAA
Yersinia pestis KIM y0769 -253 3.3 ATTGGTGATCTTGTTATTACTG
Serratia proteamaculans 568 Spro_4009 -246 3.6 TATGGTGATGTAATGAAAAAAG
Proteus mirabilis HI4320 PMI2044 -133 3.4 GGTTGTGAGATCTGTCATGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu3621 -131 3.9 TGTTGCGAGTTCTGTCACGTTA
Position: -1
Score: 3.4
Sequence: AATGGCTATCGAAATCAAAGTA
Locus tag: SARI_02841
SARI_02841 -1 3.4 AATGGCTATCGAAATCAAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceF
Ortholog function: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Escherichia coli str. K-12 substr. MG1655 b0115 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0153 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03258 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00119 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0661 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0748 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0768 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4010 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3788 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0660 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2045 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -54
Score: 3.4
Sequence: TAATGGGACAGGTTCCAGATAA
Locus tag: SARI_02842
SARI_02842 -54 3.4 TAATGGGACAGGTTCCAGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Escherichia coli str. K-12 substr. MG1655 b0114 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0152 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03259 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00118 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0660 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0747 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0767 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4011 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3789 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0659 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2046 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -308
Score: 3.2
Sequence: AGATGTTAATGCATTTATATTT
Position: -157
Score: 3.9
Sequence: AAACGTGATTTCTGTAATATTG
Position: -148
Score: 3.2
Sequence: TTCTGTAATATTGTTAAAATGT
Position: -120
Score: 3.2
Sequence: TTTACTGATTTCAATCAAAACC
Position: -4
Score: 3.2
Sequence: AATCATGGCCTACAGCAAAATT
Locus tag: SARI_02843
SARI_02843 -308 3.2 AGATGTTAATGCATTTATATTT
-157 3.9 AAACGTGATTTCTGTAATATTG
-148 3.2 TTCTGTAATATTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
-4 3.2 AATCATGGCCTACAGCAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex
Escherichia coli str. K-12 substr. MG1655 b0113 -156 3.7 AAACGTTATATATGTCAAGTTG
-131 3.8 AAATGTGCACAGTTTCATGATT
Salmonella typhimurium LT2 STM0151 -157 3.5 AAACATGATTTCTGTAAAATTG
-120 3.2 TTTACTGATTTCAATCAAAACC
-79 3 CTTATTAAGCTTTCTCACGAAA
-54 3.4 TAATGGGACAGGTTCCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_03260 -180 3.2 ATTTGTGCATAGTTACATCTTT
-157 3.1 AAACGTTATTTCTGTAATCTTG
-148 3.3 TTCTGTAATCTTGTTAAAATGT
-120 3.2 TTTACTGATTTCAATCAAAACC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -155 3.2 AAATGTTATTTCTGTAAGGTTG
-118 3.2 TTTACTGATTTCAATCAAAACC
Enterobacter sp. 638 Ent638_0659 -120 3.2 TTTACTGATTTCAATCAAAACC
-77 3.1 TATTGTATTTTCTGGCGAAAAT
-68 3 TTTAGCGATACGAATATGAAAT
Erwinia amylovora ATCC 49946 EAM_0746 -198 3.3 TAAAGCGATCGGATTTAACAAT
Yersinia pestis KIM y0766 -151 4.2 AAATGTGCTGGGTTTCATGATT
-139 3.3 TTTCATGATTTCGGTCAAGGTC
-74 3.4 TTTTGAAATTGGTATTACCAAT
Serratia proteamaculans 568 Spro_4012 -132 3.1 AAATGTGCGGGTAACCTGATTT
-56 3.4 TTTTGAAATTGGTATTACCAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -120 3.7 ATTGGTGATTTAGCTCAAGGTC
-55 3.4 TTTTGAAATTGGTATTACCAAT
Edwardsiella tarda EIB202 ETAE_0658 -143 3.2 TTTCATGATTTACATCAATAGT
Proteus mirabilis HI4320 PMI2047 -218 3.1 TGTTTTTAATCTTTTCTAATAA
-199 4.4 TAATGCGATCTAGTTATCAAAT
-181 4.2 AAATTTGATGAATTTATCAAAT
-158 3 ATTTGTTAAAATTTGCAGGTTT
-138 3.9 TTTTATGATTTCGCTCAACAAC
-95 3.1 CTTTGTTACTTTATTATCCATT
-89 3.1 TACTTTATTATCCATTACATTA
Position: -230
Score: 4.5
Sequence: AAGTGTGACGCTGTGCAAATAT
Locus tag: SARI_02901
SARI_02901 -230 4.5 AAGTGTGACGCTGTGCAAATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araC
Ortholog function: DNA-binding transcriptional dual regulator
Escherichia coli str. K-12 substr. MG1655 b0064 -229 4.4 AAGTGTGACGCCGTGCAAATAA
Salmonella typhimurium LT2 STM0104 -231 4.5 AAGTGTGACGCTGTGCAAATAT
Citrobacter koseri ATCC BAA-895 CKO_03318 -230 4.4 AAGTGTGACGCCGTGCAAATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00063 -229 4.4 AAGTGTGACGCCGTGCAAATAT
Enterobacter sp. 638 Ent638_0611 -228 4.4 AAGTGTGACGCTGTGCAAATAA
Position: -131
Score: 3.8
Sequence: ATATTTGCACAGCGTCACACTT
Locus tag: SARI_02902
SARI_02902 -131 3.8 ATATTTGCACAGCGTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: L-ribulokinase
Escherichia coli str. K-12 substr. MG1655 b0063 -131 3.9 TTATTTGCACGGCGTCACACTT
Salmonella typhimurium LT2 STM0103 -131 3.8 ATATTTGCACAGCGTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_03319 -132 3.9 ATATTTGCACGGCGTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00062 -130 3.9 ATATTTGCACGGCGTCACACTT
Enterobacter sp. 638 Ent638_0610 -130 3.8 TTATTTGCACAGCGTCACACTT
Position: -272
Score: 4.8
Sequence: TTCTGTAATCTGGATCACACTT
Position: -153
Score: 4.1
Sequence: ATTGGTGATCCGTAAAACAATA
Position: -95
Score: 4.2
Sequence: ATTGGTGAGGTGCTTAACAATA
Locus tag: SARI_02925
SARI_02925 -272 4.8 TTCTGTAATCTGGATCACACTT
-153 4.1 ATTGGTGATCCGTAAAACAATA
-95 4.2 ATTGGTGAGGTGCTTAACAATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fixA
Ortholog function: electron transfer flavoprotein, beta subunit
Escherichia coli str. K-12 substr. MG1655 b0041 -215 4.1 ATTGGTGATCCATAAAACAATA
-158 4 ATTGGTGAGGAACTTAACAATA
Salmonella typhimurium LT2 STM0075 -281 3.8 ATTTTTGCTTTATTTATCAATT
-196 3.7 AATATTGAAAATTTTCATATTT
-157 4 ATTGGTGAGGTGCGTAACACTA
Citrobacter koseri ATCC BAA-895 CKO_03341 -179 4 ATTGGTGATCCATCAAACAATA
-122 4.4 ATTAGTGAGATGCTTAACAATA
Edwardsiella tarda EIB202 ETAE_2666 -258 3.7 ATTGGTGATCTATGTATTATTT
Proteus mirabilis HI4320 PMI2653 -216 4.3 ATTGTTGATCCAGATAACAATA
-157 4.3 ATTGGTGATGTATTTAGCAATA
-98 4 ATTGGTGATCTAGATTTAATTT
Position: -165
Score: 4.8
Sequence: AAGTGTGATCCAGATTACAGAA
Locus tag: SARI_02926
SARI_02926 -165 4.8 AAGTGTGATCCAGATTACAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiT
Ortholog function: L-carnitine/gamma-butyrobetaine antiporter
Proteus mirabilis HI4320 PMI2654 -209 4.5 TAGTGTGAAGTGAATAACAGAA
Position: -145
Score: 3.7
Sequence: AAGCAAGATTTTGCTCACACTA
Locus tag: SARI_02936
SARI_02936 -145 3.7 AAGCAAGATTTTGCTCACACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: caiF
Ortholog function: transcriptional activator for carnitine metabolism
Escherichia coli str. K-12 substr. MG1655 b0034 -134 3.8 AAGCAGGATTTAGCTCACACTT
Salmonella typhimurium LT2 STM0068 -134 3.8 AAGCACGATATTGCTCACACTA
Citrobacter koseri ATCC BAA-895 CKO_03349 -144 3.8 AAGCACGATTTCGCTCACACTA
Position: -96
Score: 4.2
Sequence: AATCGAGCTATTCATCACATAT
Locus tag: SARI_02952
SARI_02952 -96 4.2 AATCGAGCTATTCATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nhaA
Ortholog function: Na+/H+ antiporter NhaA type
Salmonella typhimurium LT2 STM0039 -97 3.7 AAACGAGCTATTCATCATATAT
Yersinia pestis KIM y3704 -147 4.1 AAATGTGATATGCGTTATCAAT
Serratia proteamaculans 568 Spro_0694 -120 4.7 AAGTGTGATATAAATCGCTTAT
Proteus mirabilis HI4320 PMI0011 -110 3.9 ATAAGCGATTGAGATCGAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0587 -122 4.4 TATTGAGATGTAGATCATCAAT
Position: -250
Score: 3.9
Sequence: GAATGTGACCAATTTAAAAATT
Locus tag: SARI_02990
SARI_02990 -250 3.9 GAATGTGACCAATTTAAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: thrA
Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b0002 -83 3.8 TTTATTGACTTAGGTCACTAAA
Salmonella typhimurium LT2 STM0002 -103 4.2 GAATGTGATCAATTTAAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03385 -249 4.1 GAATGTGATCAAATTAAAAATT
Enterobacter sp. 638 Ent638_0564 -252 4.4 AATTGTGATCAAATTAGAAATT
Proteus mirabilis HI4320 PMI0001 -232 3.9 AAATTTGACATCTCTCTCGCTT
Photorhabdus luminescens subsp. laumondii TTO1 plu0563 -223 4.2 ATGTTTGACTTTGCGCACAAAT
Position: -97
Score: 3.6
Sequence: TTCAGTGATATTCGTTAAAATT
Locus tag: SARI_02991
SARI_02991 -97 3.6 TTCAGTGATATTCGTTAAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjtD
Ortholog function: RNA methyltransferase, TrmH family, group 1
Salmonella typhimurium LT2 STM4600 -97 3.6 TTCAGTGATATCAGTTAAAATT
Citrobacter koseri ATCC BAA-895 CKO_03386 -222 3.7 AGGTGTGATTCATTCTAAATTA
-53 4.2 TATGTTGACATTGGTCACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04857 -94 4 TTTAGTGATTTTTGTTGCAAAT
Enterobacter sp. 638 Ent638_0563 -54 4.3 TATGTTGAGGTGGATCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3892 -83 3.7 AATCGTGATCGATTACACGTCC
Position: -133
Score: 4.9
Sequence: TAATTTGATTCAGATCTCATTA
Position: -80
Score: 4.2
Sequence: AACTGTGATGTATATCGAAGTG
Locus tag: SARI_03011
SARI_03011 -133 4.9 TAATTTGATTCAGATCTCATTA
-80 4.2 AACTGTGATGTATATCGAAGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: deoC
Ortholog function: 2-deoxyribose-5-phosphate aldolase
Escherichia coli str. K-12 substr. MG1655 b4381 -149 4.6 TTATTTGAACCAGATCGCATTA
-96 4.5 AATTGTGATGTGTATCGAAGTG
Salmonella typhimurium LT2 STM4567 -133 4.9 TAATTTGATTCAGATCTCATTA
-80 4.2 AACTGTGATGTATATCGAAGTG
Citrobacter koseri ATCC BAA-895 CKO_03410 -134 4.2 TTATTTGAAGTGGATCTCGTTA
-81 4.2 AACTGTGATGTATATCGAAGTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04837 -158 5.2 ATTTGTGATTTTAATCACGTTA
-105 3.7 AACTGTGATGAATGTCGAAGTG
Enterobacter sp. 638 Ent638_0541 -151 4.6 AAATTTGAAGTGGATCTCATTA
-98 3.7 AACTGTGATGAATGTCGAAGTG
Erwinia amylovora ATCC 49946 EAM_0615 -233 4.6 TGATGTGATAATTCTAACATTA
Yersinia pestis KIM y3743 -169 3.7 TGCGGTGAGATGGATCTCAATT
Serratia proteamaculans 568 Spro_0660 -262 4.6 ATTTGTGAACGATATCGCGTTA
-240 5.5 TTTTGTGATGGTCTTCACATAT
-188 3.8 TAGTGTGACTGTGAACGCGAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0727 -282 4.4 AAGTGTGAATGAATGCACAAAA
Proteus mirabilis HI4320 PMI2416 -267 4.4 ATATGTGAGTTACTTCGCAACT
-135 5.6 TTTTGTGATTCTGATCACAATT
-83 4.5 TATTGTGACAGAAAGCACATCT
Position: -183
Score: 3.7
Sequence: CACTTCGATATACATCACAGTT
Position: -130
Score: 4.8
Sequence: TAATGAGATCTGAATCAAATTA
Locus tag: SARI_03012
SARI_03012 -183 3.7 CACTTCGATATACATCACAGTT
-130 4.8 TAATGAGATCTGAATCAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjjI
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b4380 -183 3.9 CACTTCGATACACATCACAATT
-130 5 TAATGCGATCTGGTTCAAATAA
Salmonella typhimurium LT2 STM4566 -183 3.7 CACTTCGATATACATCACAGTT
-130 4.8 TAATGAGATCTGAATCAAATTA
Citrobacter koseri ATCC BAA-895 CKO_03411 -75 3.7 CACTTCGATATACATCACAGTT
-22 4.4 TAACGAGATCCACTTCAAATAA
Enterobacter sp. 638 Ent638_0540 -133 4.7 TAATGAGATCCACTTCAAATTT
Proteus mirabilis HI4320 PMI2509 -159 3.7 TTATTTTAGATATATCTAATTT
Position: -228
Score: 5.4
Sequence: TATCGTGATCTCAATCACATAA
Locus tag: SARI_03048
SARI_03048 -228 5.4 TATCGTGATCTCAATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cstA2
Ortholog function: Carbon starvation protein A paralog
Escherichia coli str. K-12 substr. MG1655 b4354 -231 5.7 ATATGTGATATGAATCACATAT
Salmonella typhimurium LT2 STM4532 -229 5.4 TATCGTGATCTCAATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_03443 -228 5.2 ATTAGTGATCTCAATCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04776 -231 5.2 TATTGTGAGCTTAATCACACAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1187 -57 3.7 TATTTTTCTACAGCTAACAAAA
Proteus mirabilis HI4320 PMI0142 -279 3.6 ATTTTTTATGTAATTAATAGTT
-234 5.2 ATTTGTTATCTCGATCACAAAA
Position: -108
Score: 3.8
Sequence: ATTTGTGATCGTCGCCGAATTC
Locus tag: SARI_03196
SARI_03196 -108 3.8 ATTTGTGATCGTCGCCGAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: treB
Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b4240 -101 3.8 AATTGTGATCTTCGCTGCGTTT
Citrobacter koseri ATCC BAA-895 CKO_03571 -156 3.8 ATTTGTGATCTTCGCTGCGTTT
Enterobacter sp. 638 Ent638_0439 -106 4 TATTGTGATCTTCACCCGATTT
Serratia proteamaculans 568 Spro_0529 -124 3.8 TTTTGTGATCCTCGCCCCAAAC
Photorhabdus luminescens subsp. laumondii TTO1 plu3288 -127 4.3 CAATGTGATCTTCAACCCATTT
Position: -238
Score: 3.8
Sequence: AAACGTAGTACCCATCACACTT
Position: -171
Score: 4
Sequence: TGCCGTGAGAGATCTCACACTT
Position: -120
Score: 4.1
Sequence: TTCTGTGGCGCAGATCACCTAT
Locus tag: SARI_03207
SARI_03207 -238 3.8 AAACGTAGTACCCATCACACTT
-171 4 TGCCGTGAGAGATCTCACACTT
-120 4.1 TTCTGTGGCGCAGATCACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: CKO_03591
Ortholog function: hypothetical protein
Salmonella typhimurium LT2 STM4440 -229 4.5 AACTGTAATACCCATCACACTT
-162 3.8 TGCCGCGATAGATCTCACACTT
-111 4.1 TTCTGTGGCGCAGATCACCTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04633 -172 4.3 TGTTGTGATACATCTCACGCCA
-121 4.2 ATATGTGGAGTCGATCACCTAA
Enterobacter sp. 638 Ent638_0424 -265 3.8 AAACCTTATCCGCGTCACACTT
-189 4.6 TAGCGTGATATTCATCACGCAA
Erwinia amylovora ATCC 49946 EAM_0469 -156 3.8 TGATGTGAGTTGTCTCGCTTTG
Position: -193
Score: 4.7
Sequence: TTTTGTGAGCTAATTCGCGTTA
Locus tag: SARI_03233
SARI_03233 -193 4.7 TTTTGTGAGCTAATTCGCGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cycA2
Ortholog function: D-alanine/D-serine/glycine permease
Escherichia coli str. K-12 substr. MG1655 b4208 -198 4.7 TTTTGTGAGCTGTTTCGCGTTA
Salmonella typhimurium LT2 STM4398 -193 5.1 TTTTGTGAGCTAATTCGCATTA
-170 3.9 CAAAGTGATATAACACTCATTT
Citrobacter koseri ATCC BAA-895 CKO_03624 -199 4.4 TTTTGTGAGCTAATTCGCGTTG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04601 -192 4.7 TTTTGTGAGCTATTTCGCGTTA
-169 3.8 ATGAGTGATATAACACTCACTT
Enterobacter sp. 638 Ent638_0378 -201 4.2 TTTTGTGAGCTGTTTTGCATTG
Yersinia pestis KIM y2447 -199 4.5 CACTGTGATGTACTTAACAAAA
-118 3.7 TAATATTAAATTATTCGCAAAT
Proteus mirabilis HI4320 PMI1614 -102 4.4 TTCTGAGATTTGTGTCACAATA
Photorhabdus luminescens subsp. laumondii TTO1 plu1965 -102 4.6 TATAGTAATCTGTGTCACAATA
Position: -164
Score: 4.1
Sequence: TACCGTAATCTGGATCACTTAA
Position: -114
Score: 4.1
Sequence: TTTTGTGAAATAGGTCACCGCT
Position: -53
Score: 3.6
Sequence: AATTTTGCTAAGCACCACCATA
Locus tag: SARI_03305
SARI_03305 -164 4.1 TACCGTAATCTGGATCACTTAA
-114 4.1 TTTTGTGAAATAGGTCACCGCT
-53 3.6 AATTTTGCTAAGCACCACCATA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fxsA
Ortholog function: suppressor of F plamsid exlusion of phage T7
Escherichia coli str. K-12 substr. MG1655 b4140 -202 4.1 TACCGTAATCTGGATCACTTTA
-152 4.3 ATTTGTGAAATAGATCACCGCT
Salmonella typhimurium LT2 STM4327 -203 4.1 TACCGTAATCTGGATCACTTAA
-153 4.1 TTTTGTGAAATAGGTCACCGCT
Citrobacter koseri ATCC BAA-895 CKO_03695 -156 4.1 TTTTGTGAAATAGGTCACCGCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04530 -140 3.7 ATCTGTGAAATGGGTCACCGCT
Enterobacter sp. 638 Ent638_0327 -151 3.8 ATCTGTGAAATGAATCACCGCT
Erwinia amylovora ATCC 49946 EAM_0417 -161 3.9 ATATCTGTTCCAGGTCACATTG
Yersinia pestis KIM y0607 -245 4.8 ATCTGTGATTGCTCTCACACTT
Serratia proteamaculans 568 Spro_0407 -117 4.9 TTCTGTGATCTCATTCACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0623 -245 3.7 AACTGTGATTGTAGTCACGAGT
-185 3.6 AAATGTGCAAAGGCGCACCCAT
Edwardsiella tarda EIB202 ETAE_0312 -189 4.6 ATCTGTGATAATACTCACAGAT
Proteus mirabilis HI4320 PMI2545 -188 4.7 TTTTGTGATCTATCTCATGGAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4136 -188 5.6 ATATGTGATATTTATCACAATT
Position: -161
Score: 4.2
Sequence: AGCGGTGACCTATTTCACAAAA
Position: -111
Score: 4.2
Sequence: TTAAGTGATCCAGATTACGGTA
Locus tag: SARI_03306
SARI_03306 -161 4.2 AGCGGTGACCTATTTCACAAAA
-111 4.2 TTAAGTGATCCAGATTACGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aspA
Ortholog function: aspartate ammonia-lyase
Escherichia coli str. K-12 substr. MG1655 b4139 -206 4.5 AGCGGTGATCTATTTCACAAAT
-156 4.2 TAAAGTGATCCAGATTACGGTA
Salmonella typhimurium LT2 STM4326 -209 4.2 AGCGGTGACCTATTTCACAAAA
-159 4.2 TTAAGTGATCCAGATTACGGTA
Citrobacter koseri ATCC BAA-895 CKO_03696 -54 4.2 AGCGGTGACCTATTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04529 -204 3.9 AGCGGTGACCCATTTCACAGAT
-154 3.8 ATAAGTGATCAAGCTTACTGAT
Enterobacter sp. 638 Ent638_0326 -205 4.1 AGCGGTGATTCATTTCACAGAT
Erwinia amylovora ATCC 49946 EAM_0416 -228 4.2 CAATGTGACCTGGAACAGATAT
Yersinia pestis KIM y0606 -224 4.6 AAGTGTGAGAGCAATCACAGAT
Serratia proteamaculans 568 Spro_0406 -205 4.7 AAACGTGAATGAGATCACAGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0621 -272 4 ACTCGTGACTACAATCACAGTT
Edwardsiella tarda EIB202 ETAE_0311 -197 4.4 ATCTGTGAGTATTATCACAGAT
Proteus mirabilis HI4320 PMI2546 -206 4.1 ATCCATGAGATAGATCACAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4137 -274 3.8 AGATATAATTGGGGTCACAGTT
-211 5.6 AATTGTGATAAATATCACATAT
Position: -4
Score: 3.9
Sequence: TAATATGATAGTTGTCGAACTT
Locus tag: SARI_03307
SARI_03307 -4 3.9 TAATATGATAGTTGTCGAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuA
Ortholog function: anaerobic C-4-dicarboxylate symporter
Salmonella typhimurium LT2 STM4325 -209 4.2 AGCGGTGACCTATTTCACAAAA
-159 4.2 TTAAGTGATCCAGATTACGGTA
Citrobacter koseri ATCC BAA-895 CKO_03697 -54 4.2 AGCGGTGACCTATTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04528 -204 3.9 AGCGGTGACCCATTTCACAGAT
-154 3.8 ATAAGTGATCAAGCTTACTGAT
Enterobacter sp. 638 Ent638_0325 -205 4.1 AGCGGTGATTCATTTCACAGAT
Erwinia amylovora ATCC 49946 EAM_0415 -228 4.2 CAATGTGACCTGGAACAGATAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0620 -272 4 ACTCGTGACTACAATCACAGTT
Position: -53
Score: 3.5
Sequence: GGCTGTGATCCATTTATCAAAA
Position: -2
Score: 3.5
Sequence: AAATGTTATTTAGTATACAGCT
Locus tag: SARI_03346
SARI_03346 -53 3.5 GGCTGTGATCCATTTATCAAAA
-2 3.5 AAATGTTATTTAGTATACAGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuB
Ortholog function: C4-dicarboxylate transporter DcuB
Escherichia coli str. K-12 substr. MG1655 b4123 -53 3.5 GACTGTGATCTATTCAGCAAAA
Salmonella typhimurium LT2 STM4301 -53 3.5 GGCTGTGATCCATTTATCAAAA
Citrobacter koseri ATCC BAA-895 CKO_03748 -52 3.9 GACTGTGATCTATTTATCAAAA
Enterobacter sp. 638 Ent638_2479 -81 3.3 AAATCTGATCTGGCTCCCAGCC
Serratia proteamaculans 568 Spro_3863 -77 3.6 GTTTGTGATCGCTATCCCTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1533 -296 3.5 TATTGCGAGCGAGATCTTTTAT
-247 3.5 TTAATAGATTTAGATCAAGAAA
Edwardsiella tarda EIB202 ETAE_2844 -194 3.6 ATACTTTATTCAGATCAATTTT
Proteus mirabilis HI4320 PMI0389 -138 3.3 AACTATAACAACGATCAAAAAA
Position: -100
Score: 4.1
Sequence: TTGCGTGATCTGTCGCCCAAAT
Locus tag: SARI_03400
SARI_03400 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: acs
Ortholog function: acetyl-coenzyme A synthetase
Escherichia coli str. K-12 substr. MG1655 b4069 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Salmonella typhimurium LT2 STM4275 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Citrobacter koseri ATCC BAA-895 CKO_03816 -101 4.3 TTGCGTGATCTGCCGCGCAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04478 -101 3.9 TTGCGTGATCTGCCCCCCAATT
Enterobacter sp. 638 Ent638_0276 -101 4.1 TTGCGTGATCTGTCGCCCAAAT
Yersinia pestis KIM y0510 -97 4.2 ATACGTGATCTGCCGCCCAAAA
Serratia proteamaculans 568 Spro_0297 -97 4 TTGCGTGATCTGCCGCCCAAAA
Proteus mirabilis HI4320 PMI3037 -97 4.5 TTTCGTGATCTTATGCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0074 -98 4.2 TTGCGTGATCTTCCGCGCAAAA
Position: -7
Score: 4
Sequence: TTCTGTGATGAATGACACCATT
Locus tag: SARI_03401
SARI_03401 -7 4 TTCTGTGATGAATGACACCATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcH
Ortholog function: membrane protein
Escherichia coli str. K-12 substr. MG1655 b4068 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Salmonella typhimurium LT2 STM4274 -100 4.1 TTGCGTGATCTGTCGCCCAAAT
Citrobacter koseri ATCC BAA-895 CKO_03817 -101 4.3 TTGCGTGATCTGCCGCGCAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04477 -101 3.9 TTGCGTGATCTGCCCCCCAATT
Enterobacter sp. 638 Ent638_0275 -101 4.1 TTGCGTGATCTGTCGCCCAAAT
Erwinia amylovora ATCC 49946 EAM_0326 -98 3.9 CTGCGTGATCTGCCGCGCAAAA
Yersinia pestis KIM y0509 -97 4.2 ATACGTGATCTGCCGCCCAAAA
Serratia proteamaculans 568 Spro_0296 -97 4 TTGCGTGATCTGCCGCCCAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0807 -203 5 TATTGTGACATACATCACTTAT
-97 4.1 TTGCGTGATCAATCGCGCAAAA
Proteus mirabilis HI4320 PMI3038 -97 4.5 TTTCGTGATCTTATGCGCAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0073 -98 4.2 TTGCGTGATCTTCCGCGCAAAA
Position: -149
Score: 5.7
Sequence: TTATGTGATATAGTTCACAAAA
Locus tag: SARI_03413
SARI_03413 -149 5.7 TTATGTGATATAGTTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yjcB
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b4060 -149 5.7 AATTGTGATATAGTTCACAAAA
Salmonella typhimurium LT2 STM4263 -149 5.7 TTTTGTGATATAGTTCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_03830 -150 5.7 TATTGTGATATAGTTCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04460 -143 5.4 AAGTGTGATATAGTTCACACAA
Enterobacter sp. 638 Ent638_0263 -82 5.3 AAACGTGATATAGTTCACACAT
Serratia proteamaculans 568 Spro_2355 -81 5 CAATGTGACGCAGATCACACTA
Position: -139
Score: 3.7
Sequence: TGTTGTGATCATCCTCTTTTTT
Locus tag: SARI_03429
SARI_03429 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aphA
Ortholog function: acid phosphatase/phosphotransferase
Escherichia coli str. K-12 substr. MG1655 b4055 -130 3.6 CATCCTGCTTTTCATCACAAAA
-57 4 TTTTGCAACAAATCTCACAATA
Salmonella typhimurium LT2 STM4249 -139 3.7 TGTTGTGATCATCCTCTTTTTT
Citrobacter koseri ATCC BAA-895 CKO_03845 -255 3.9 TATTGTGAATGCGTGTACAGAA
-224 3.7 GTGTGTGTGGTTTATCACACAT
Enterobacter sp. 638 Ent638_0259 -57 3.8 TTTTTTGACCATTCGCTCAATT
Edwardsiella tarda EIB202 ETAE_3469 -150 5 TTTTGTGATGAATGTCACGTAT
-98 3.7 AACATAGATCATGATCACATTA
Proteus mirabilis HI4320 PMI0729 -148 4.3 AAGTGTTAGATAGATCAAAAAA
-87 4.3 TAACGTGCGCTATATCTCATTT
-34 4.3 TTCTGTGATTAATATAAAAATT
Position: -120
Score: 4.9
Sequence: TTATGTAACACAGATCACATAA
Locus tag: SARI_03450
SARI_03450 -120 4.9 TTATGTAACACAGATCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malE
Ortholog function: maltose ABC transporter periplasmic protein
Salmonella typhimurium LT2 STM4229 -192 4.3 TTTCGTGATGCCGCCCGCAAAA
-160 3.6 TTTTGTGTGCGCCAGCACGCAT
-158 3.8 TTGTGTGCGCCAGCACGCATTA
-129 4.3 TTATGCAACACAGATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_03881 -193 3.7 TTTCGTGATGTCACCTGCAAAA
-159 3.9 TTATGTGCGCCAACACGCATTA
-130 4.3 TTATGCAACACAGATCACATAA
Position: -61
Score: 3.7
Sequence: TTCTGTGACTGGCGTTACAATC
Locus tag: SARI_03461
SARI_03461 -61 3.7 TTCTGTGACTGGCGTTACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pgi
Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9)
Salmonella typhimurium LT2 STM4221 -61 3.7 TTCTGTGACTGGCGTTACAATC
Citrobacter koseri ATCC BAA-895 CKO_03893 -61 4.1 TTTTGTGACTGGCGTTACAATC
Serratia proteamaculans 568 Spro_4477 -80 3.7 AAAAGAGATCATAATCACAGTC
Proteus mirabilis HI4320 PMI2754 -245 3.7 CAGTGAGATGTTAAACACAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4379 -205 3.8 TGACGCGATGAGAATCATAAAA
Position: -179
Score: 3.4
Sequence: AAACGTGATTTAACGCCTGATT
Locus tag: SARI_03487
SARI_03487 -179 3.4 AAACGTGATTTAACGCCTGATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hupA
Ortholog function: DNA-binding protein HU-alpha (HU-2)
Escherichia coli str. K-12 substr. MG1655 b4000 -179 3.4 AAACGTGATTTAACGCCTGATT
Citrobacter koseri ATCC BAA-895 CKO_02986 -179 3.4 AAACGTGATTTAACGCCTGATT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04382 -179 3.4 AAACGTGATTTACCGCCTGAAT
Enterobacter sp. 638 Ent638_0213 -179 3.5 AAACGTGATTTAACGCCTGTTT
Yersinia pestis KIM y0499 -181 3.4 AAACGTGATTTAACGCCTGATT
Serratia proteamaculans 568 Spro_0290 -181 3.4 AAACGTGATTTAACGCCTCATT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0238 -197 3.3 AAACGTGATTTAAGGCCTGAAA
Edwardsiella tarda EIB202 ETAE_0183 -182 3.3 AAACGTGATTTAACACCTGATT
Proteus mirabilis HI4320 PMI2771 -183 3.7 AAACGTGATTTAGTGCTTGAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0492 -179 3.4 AAACGTGATTTAATGCTTTAAA
Position: -44
Score: 3.5
Sequence: AATTATGAATAAAAATACATTA
Locus tag: SARI_03543
SARI_03543 -44 3.5 AATTATGAATAAAAATACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: argC
Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38)
Salmonella typhimurium LT2 STM4121 -44 3.5 AATTATGAATAAAAATACATTA
Citrobacter koseri ATCC BAA-895 CKO_03036 -110 4 ATTTGTGAATAAAAATACATTA
Enterobacter sp. 638 Ent638_4028 -44 3.8 AAATGTGAATAAAAATACACTA
Yersinia pestis KIM y0310 -43 3.7 TTTATTGACATAAATAAAAATA
Serratia proteamaculans 568 Spro_4781 -167 4 TATTGTGAATAAAAATACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0192 -159 3.5 TATTTTGAATAAAAATACAATA
Edwardsiella tarda EIB202 ETAE_3482 -160 3.4 AATTATGAATAAAAATACAATA
Proteus mirabilis HI4320 PMI3237 -57 3.6 TTTTTTGAATAAAAATACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu4744 -59 3.6 TTTTTTGAATAAAAATACATTA
Position: -66
Score: 3.9
Sequence: TAATGTATTTTTATTCATAATT
Locus tag: SARI_03544
SARI_03544 -66 3.9 TAATGTATTTTTATTCATAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: argE
Ortholog function: acetylornithine deacetylase
Escherichia coli str. K-12 substr. MG1655 b3957 -66 3.7 TAGTGTATTTTTATTCATAAAT
Salmonella typhimurium LT2 STM4120 -66 3.9 TAATGTATTTTTATTCATAATT
Citrobacter koseri ATCC BAA-895 CKO_03037 -27 4.3 TAATGTATTTTTATTCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04246 -27 4 TATTGTATTTTTATTCAAAATA
Enterobacter sp. 638 Ent638_4029 -66 4.2 TAGTGTATTTTTATTCACATTT
Erwinia amylovora ATCC 49946 EAM_0137 -66 3.8 TATTGTATTTTTATTCACTATT
Yersinia pestis KIM y0309 -223 3.6 TATTTTTATTTATGTCAATAAA
Serratia proteamaculans 568 Spro_4782 -71 4.3 TATTGTATTTTTATTCACAATA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0191 -65 4 TATTGTATTTTTATTCAAAATA
Edwardsiella tarda EIB202 ETAE_3483 -65 3.9 TATTGTATTTTTATTCATAATT
Proteus mirabilis HI4320 PMI3236 -65 3.9 TAATGTATTTTTATTCAAAAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4745 -65 3.9 TAATGTATTTTTATTCAAAAAA
Position: -147
Score: 3.8
Sequence: TTTATTGACACAGTACACACAT
Locus tag: SARI_03570
SARI_03570 -147 3.8 TTTATTGACACAGTACACACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpF
Ortholog function: facilitator for glycerol uptake
Salmonella typhimurium LT2 STM4087 -147 3.9 TTTATTGACGCAGTACACACAT
Position: -243
Score: 4.1
Sequence: TTATGTGATCTTACGCAGCATT
Position: -99
Score: 3.8
Sequence: AAACGTGAAGTTAATCACCTCG
Locus tag: SARI_03596
SARI_03596 -243 4.1 TTATGTGATCTTACGCAGCATT
-99 3.8 AAACGTGAAGTTAATCACCTCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaT
Ortholog function: L-rhamnose-proton symport
Escherichia coli str. K-12 substr. MG1655 b3907 -145 4.1 AGATGTGAAGCAAATCACCCAC
Salmonella typhimurium LT2 STM4050 -293 3.6 TTATGTGACCTCACGCAGCGTT
-149 3.9 AAACGTGAAGTTAATCACTTCA
Citrobacter koseri ATCC BAA-895 CKO_03094 -148 4.1 ATATGTGAGCCAAATCACCCGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04216 -149 4.7 TTTTGTGATGTAGAACAACTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0450 -193 3.6 TTTTGTGATCCTGCCTATATCA
Position: -271
Score: 4.2
Sequence: CTTTGTGATCGCTTTCACGGAG
Locus tag: SARI_03652
SARI_03652 -271 4.2 CTTTGTGATCGCTTTCACGGAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnA
Ortholog function: glutamine synthetase
Escherichia coli str. K-12 substr. MG1655 b3870 -269 4.2 CTTTGTGATCGCTTTCACGGAG
Salmonella typhimurium LT2 STM4007 -272 4.2 CTTTGTGATCGCTTTCACGGAG
-114 3.8 CAATGTGAAAGTTGGCACAGAT
Citrobacter koseri ATCC BAA-895 CKO_03140 -250 4.2 CTTTGTGATCGCTTTCACGGAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04178 -299 3.9 CTTTGTGACCGCTTTCACGGAG
Serratia proteamaculans 568 Spro_4881 -267 4 GTATGTGATCCCTTTCACGGTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0029 -265 4.2 CTTTGTGATCCCTTTCACGGTG
Edwardsiella tarda EIB202 ETAE_3493 -267 4.2 GTTTGTGATCCTATTCACGATG
Proteus mirabilis HI4320 PMI2882 -270 4.7 AATTGTGATCCTTTTCACGCCT
-215 3.8 AATTGTGCAACTATTCAGACTT
-181 3.9 ATTTGTGCAATAATTAAAAAAT
Position: -144
Score: 5.1
Sequence: TAATGTGATAATCATCACCTTT
Locus tag: SARI_03689
SARI_03689 -144 5.1 TAATGTGATAATCATCACCTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: udp
Ortholog function: Uridine phosphorylase (EC 2.4.2.3)
Escherichia coli str. K-12 substr. MG1655 b3831 -144 5.2 TTATGTGATTTGCATCACTTTT
-92 4.2 CATGGTGATGAGTATCACGAAA
Salmonella typhimurium LT2 STM3968 -144 5.1 TATTGTGATGAACATCACTTTT
-92 4.1 CATAGTGATGGCTGTCACGAAA
Citrobacter koseri ATCC BAA-895 CKO_00173 -143 5.2 TTATGTGATGTAAATCACTATT
-91 3.9 CATGGTGATGAGCGTCACGAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04327 -143 5.2 TAATGTGATGTGTATCACTATT
-91 4.1 CTTGGTGACTATCATCACAAAA
Enterobacter sp. 638 Ent638_3962 -143 4.7 TAGTGTGATGCATGTCACTATT
Erwinia amylovora ATCC 49946 EAM_0200 -143 4.6 AATTGCGACTTGTATCACCTTT
-90 4 ATTAAGGATGTTCATCACATAA
Yersinia pestis KIM y0444 -149 5.4 ATGTGTGATTTAAATCACAATT
-97 4 CAAGGTGACATAAATCACGAAA
Serratia proteamaculans 568 Spro_0244 -143 5.3 TTTTGTGACTTTAATCACAAAA
-125 3.7 AAAAGTTATGTAGATTGCATTC
-91 4.1 CATAGTGATGGTTGTCACGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0185 -197 5.1 AAAAGTGATTTAAGTCACATTT
Edwardsiella tarda EIB202 ETAE_0143 -148 4.7 TATTGTGAAAATAATCACAGTT
Proteus mirabilis HI4320 PMI3532 -145 5.1 ATTTGTGATAACTATCACGTTT
-93 3.6 ACAGGTGACGTCAATCACTAAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4417 -271 5.2 TTTTGTGATTTATATCTCAAAA
-219 4 TGAAGTGACATTTATCACTAAA
Position: -164
Score: 4
Sequence: AGGTGTTAAATTGATCACGTTT
Locus tag: SARI_03713
SARI_03713 -164 4 AGGTGTTAAATTGATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyaA
Ortholog function: Adenylate cyclase (EC 4.6.1.1)
Salmonella typhimurium LT2 STM3939 -164 4 AGGTGTTAAATTGATCACGTTT
Citrobacter koseri ATCC BAA-895 CKO_00148 -174 4 AGGTGTTAAATTGATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04305 -147 4 AGGTGTTAAATTGATCACGTTT
Position: -234
Score: 4.2
Sequence: AAACGTGATCAATTTAACACCT
Locus tag: SARI_03714
SARI_03714 -234 4.2 AAACGTGATCAATTTAACACCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemC
Ortholog function: porphobilinogen deaminase
Escherichia coli str. K-12 substr. MG1655 b3805 -236 4.2 AAACGTGATCAATTTAACACCT
Salmonella typhimurium LT2 STM3938 -219 4.2 AAACGTGATCAATTTAACACCT
Citrobacter koseri ATCC BAA-895 CKO_00147 -220 4.2 AAACGTGATCAATTTAACACCT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04304 -232 4.2 AAACGTGATCAATTTAACACCT
Enterobacter sp. 638 Ent638_3987 -211 4.2 AAACGTGATCAATCTAACACCT
Serratia proteamaculans 568 Spro_0178 -223 4.2 AAACGTGATCAATCTAACACCT
Edwardsiella tarda EIB202 ETAE_0118 -205 4.2 AAACGTGATCAATTTAACACCT
Position: -262
Score: 4.9
Sequence: ATATGTGATCTGGTGCACGCTT
Locus tag: SARI_03779
SARI_03779 -262 4.9 ATATGTGATCTGGTGCACGCTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase subunit I
Escherichia coli str. K-12 substr. MG1655 b3739 -263 4.8 ATATGTGATCTGAAGCACGCTT
Salmonella typhimurium LT2 STM3872 -262 4.6 ATGTGTGATCTGGTGCACGCTT
-211 4.1 TTTTGTACGATCGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_00079 -262 4.7 ATATGTGATCCGAAGCACGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04144 -262 4.7 TTATGTGATCTGATGCACGCTT
Enterobacter sp. 638 Ent638_4125 -261 4.8 TTTTGTGATCTCGTGCACGCTT
Erwinia amylovora ATCC 49946 EAM_3481 -264 4.4 ATTTGTGATCGTGGACACGCTT
Yersinia pestis KIM y4142 -263 5.4 TTATGTGATGTATTTCACGTTT
Serratia proteamaculans 568 Spro_0001 -265 4.4 TATTGTGAGCAACTACACGTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -254 5 TTATGTGAGTCACATCACAGAT
Edwardsiella tarda EIB202 ETAE_3526 -297 3.7 AATCGTGAAAATATTTAAATTA
Proteus mirabilis HI4320 PMI3057 -259 5 TTGTGTGTTCTAGATCACATTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0047 -265 5.7 TTATGTGATTTAAATCACATTT
Position: -56
Score: 4.2
Sequence: TTTTTTGAGCCGAATCGCGTTA
Locus tag: SARI_03811
SARI_03811 -56 4.2 TTTTTTGAGCCGAATCGCGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yidA
Ortholog function: Phosphatase YidA
Escherichia coli str. K-12 substr. MG1655 b3697 -56 4.1 ATTTTTGAGCGGAATCGCGTTA
Salmonella typhimurium LT2 STM3831 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Citrobacter koseri ATCC BAA-895 CKO_00044 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04101 -56 4.1 TTTTTTGAGCGGAATCGCGTTA
Position: -58
Score: 4.9
Sequence: AATCGTGATACAGCGCACAAAT
Locus tag: SARI_03902
SARI_03902 -58 4.9 AATCGTGATACAGCGCACAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yicG
Ortholog function: Putative inner membrane protein
Escherichia coli str. K-12 substr. MG1655 b3646 -58 4.4 AATCGTGACAATGCGCACAAAT
Salmonella typhimurium LT2 STM3738 -210 3.7 TTAAATTATCTAAGTCAAAATA
-147 3.8 TTTATTGATATTTATAATAAAT
-58 4.9 AATCGTGATACAGCGCACAAAT
Citrobacter koseri ATCC BAA-895 CKO_05103 -58 4.7 AATCGTGATATTACGCACAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03994 -55 4.9 AATCGTGATCCTGCGCACAAAT
Enterobacter sp. 638 Ent638_0094 -55 3.9 AATCGTGATATGTTCTGCAAAA
Edwardsiella tarda EIB202 ETAE_0032 -180 3.8 AAAACTAATCTATATCAAATAT
Position: -325
Score: 4.6
Sequence: TCCTGTGATTAAGATCACAAAA
Position: -281
Score: 5.3
Sequence: AAATGTGAAACATATCACATAA
Position: -208
Score: 4.5
Sequence: ATTTGCGATCAAAATCACATCA
Position: -164
Score: 5.8
Sequence: TTATGTGATCTAAATCACATTA
Locus tag: SARI_03955
SARI_03955 -325 4.6 TCCTGTGATTAAGATCACAAAA
-281 5.3 AAATGTGAAACATATCACATAA
-208 4.5 ATTTGCGATCAAAATCACATCA
-164 5.8 TTATGTGATCTAAATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: mtlA
Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69)
Escherichia coli str. K-12 substr. MG1655 b3599 -206 4.5 TTTTGTGATGAACGTCACGTCA
-162 5.4 TTATGTGATTGATATCACACAA
-113 3.3 TTCAGTGCCAGATTTCGCAGTA
Salmonella typhimurium LT2 STM3685 -207 4.8 CTTTGTGATCAATATCACATCA
-163 5.4 TTATGTGACGCAAATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_05054 -203 5.2 TTTTGTGATCAATATCACATCA
-159 5 TCATGTGATCCAAATCACACAA
-110 3.4 TTCAGTGCCAGATTTCGCACTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03942 -208 4.9 TTTTGTGATCATCATCACTAAA
-164 5.2 TCATGTGATCCAAATCACATAA
-115 3.4 TTCAGTGCCAGATTTCGCACTA
Enterobacter sp. 638 Ent638_0136 -224 3.4 TATTTTTTTCATACTCTCATTT
-205 4.8 TTTTGTGATGGCGATCACCTCA
-161 5.1 TTGCGTGATGCAGATCACACAA
Erwinia amylovora ATCC 49946 EAM_3416 -229 3.3 CATTGCGAATATCTTTACACTT
-210 3.9 CTTCGTGACTCATGTCACTAAA
-166 4.8 TTAAGTGACCCGCATCACACTT
-95 3.2 CGTTTTGATCGTGATCCCTCAA
-34 3.5 ACATGAGATTTGCATCATTAAT
Yersinia pestis KIM y4087 -223 4.6 AGATGTGATCTTAATCAACAAA
-179 4.5 TTGTGTGACTTTCGTCACGAAA
Serratia proteamaculans 568 Spro_0072 -195 5.2 AAATGTGATGTATATCACTATA
-151 4.5 GTTGGTGATCTGCATCACAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0087 -230 5.1 TTTTGTGAAGTAAATCACCTAT
-186 4.5 TTGTGTGATTTTTGTCACGTTG
Position: -145
Score: 4.3
Sequence: AAATGTGTCGCTTATCGCAAAT
Locus tag: SARI_03972
SARI_03972 -145 4.3 AAATGTGTCGCTTATCGCAAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: malS
Ortholog function: periplasmic alpha-amylase precursor
Escherichia coli str. K-12 substr. MG1655 b3571 -269 4.2 ATTTGAGAGTTGAATCTCAAAT
-152 4.1 AAATGTGGGGGTTATCGCAAAA
-118 3.6 TTGCGCGAGATCGCTCACCCTT
Salmonella typhimurium LT2 STM3664 -148 4.5 AAATGTGGTGCTTATCGCAAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03935 -146 3.7 AAATGCTAGCTTCGTCTCATTT
Enterobacter sp. 638 Ent638_0150 -264 4.2 AATTGAGAGCGGAATCTCAAAT
-147 4.1 AATTGTGTGCGATATCGCAGAT
-117 3.8 AATTTTGCGCGAGATCACTCAT
Serratia proteamaculans 568 Spro_0054 -163 4 CATTGTAATATAGATTAAAAAA
Position: -222
Score: 4.2
Sequence: ATTTGCGATAAGCGACACATTT
Locus tag: SARI_03973
SARI_03973 -222 4.2 ATTTGCGATAAGCGACACATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bax
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3570 -189 4.2 TTTTGCGATAACCCCCACATTT
-72 4.4 ATTTGAGATTCAACTCTCAAAT
Salmonella typhimurium LT2 STM3663 -189 4.4 ATTTGCGATAAGCACCACATTT
Enterobacter sp. 638 Ent638_0151 -219 4.2 ATGAGTGATCTCGCGCAAAATT
-189 4.1 ATCTGCGATATCGCACACAATT
-72 4.3 ATTTGAGATTCCGCTCTCAATT
Proteus mirabilis HI4320 PMI2667 -233 4.2 AAATTTGAGTTAAATAGCATTA
Position: -145
Score: 4.1
Sequence: TTGTGCGAGCCAGCTCAAACTT
Locus tag: SARI_04020
SARI_04020 -145 4.1 TTGTGCGAGCCAGCTCAAACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dctA
Ortholog function: C4-dicarboxylate transport protein
Escherichia coli str. K-12 substr. MG1655 b3528 -143 4.1 TTGTGCGAGCCAGCTCAAACTT
Salmonella typhimurium LT2 STM3614 -145 4.1 TTGTGCGAGCCAGCTCAAACTT
Citrobacter koseri ATCC BAA-895 CKO_04970 -145 4 TTGTGCGAGCCAGCTCAAAGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03878 -143 3.9 TTGTGCGAGTCAGCTCAAAGAT
Erwinia amylovora ATCC 49946 EAM_3380 -134 4.4 TGAAGTGATTCAGCTCATAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4362 -157 3.8 TGACGTGATTCAGCTCTTGTTT
Edwardsiella tarda EIB202 ETAE_3379 -155 3.6 TTATGCGTTTCAGCTCATAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3205 -176 4.9 TTATGTGATCTATATCTTAAAA
Position: -154
Score: 4.5
Sequence: TTATGTGAAGCATTTCATAGAA
Locus tag: SARI_04026
SARI_04026 -154 4.5 TTATGTGAAGCATTTCATAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhjE
Ortholog function: Inner membrane metabolite transport protein YhjE
Escherichia coli str. K-12 substr. MG1655 b3523 -155 4.5 TTATGTGAAGCATTTCATAGAA
Salmonella typhimurium LT2 STM3609 -154 4.2 TTATGTGAAGCATTTCATAGAC
Citrobacter koseri ATCC BAA-895 CKO_04963 -155 4 TTGTGTGAAGCATTTCATAGAC
-94 3.7 TTATTTGAGCGAAATCCCGCTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03874 -154 4.3 TTGTGTGAAGCATTTCATAGAA
Enterobacter sp. 638 Ent638_3920 -155 4.2 AACTGTGAAGCATTTCATAGAA
Erwinia amylovora ATCC 49946 EAM_3376 -134 3.6 AAATATGCCGTATTGAACATTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0769 -222 4.7 AATTGTGTGCGATCTCACATAT
Position: -185
Score: 4
Sequence: ATACGTGTTTCAGCTCTCACTT
Locus tag: SARI_04076
SARI_04076 -185 4 ATACGTGTTTCAGCTCTCACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ugpB
Ortholog function: Glycerol-3-phosphate ABC transporter, periplasmic glycerol-3-phosphate-binding protein (TC 3.A.1.1.3)
Escherichia coli str. K-12 substr. MG1655 b3453 -182 3.6 ATCCGTGCCCCATCTCCCATTT
Salmonella typhimurium LT2 STM3557 -184 3.5 ATCCGTGCCGTAGCTCCCACTT
Citrobacter koseri ATCC BAA-895 CKO_04874 -185 3.3 TATTTTTCTGTCATTCGCGCAT
-162 3.2 TCATGTTACCTCGCGAGCATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03813 -88 3.4 TATTTTTCTGTAATTCGAACAT
Enterobacter sp. 638 Ent638_3856 -162 3.5 AGTTATTATTCCCGCCACATTA
-58 3.2 TCATGTTACCTCGCGAGCATAA
Erwinia amylovora ATCC 49946 EAM_3285 -171 3.9 GTGTGTGATGCCGTTAACACAG
Yersinia pestis KIM y0434 -72 3.5 AAAACTGATTTATTTCGCTCAT
-41 4.1 TTTTTTGATGTGAGCCACACAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2429 -145 3.5 TATCGCGATACAGTTCATCACT
Edwardsiella tarda EIB202 ETAE_3321 -63 3.4 CAATATGTTGTTTATCACTCAA
Position: -73
Score: 4.8
Sequence: AATTTTGAAGTAGCTCACACTT
Locus tag: SARI_04087
SARI_04087 -73 4.8 AATTTTGAAGTAGCTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: gluconate kinase 1
Citrobacter koseri ATCC BAA-895 CKO_04856 -172 4.8 AAATTTGAAGTAGCTCACACTT
Enterobacter sp. 638 Ent638_3845 -120 4.6 AAGTTTGAACTAGCTCACACTT
Position: -116
Score: 4.4
Sequence: TAATGTTATACATATCACTCTA
Position: -83
Score: 3.8
Sequence: TGATGTTACCAATAGCACGTTT
Locus tag: SARI_04095
SARI_04095 -116 4.4 TAATGTTATACATATCACTCTA
-83 3.8 TGATGTTACCAATAGCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpD
Ortholog function: glycerol-3-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b3426 -116 4.4 TAATGTTATACATATCACTCTA
Salmonella typhimurium LT2 STM3526 -116 4.4 TAATGTTATACATATCACTCTA
Citrobacter koseri ATCC BAA-895 CKO_04845 -116 4.5 TAATGTTATATGTATCACTCTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03792 -119 3.7 ATATGTTACACCCATCACTTCA
-58 3.7 TATAGTGAGCGATATCGAGCAT
Enterobacter sp. 638 Ent638_3835 -116 4.4 TTATGTTATCTCTATCACTCAA
-55 4 TATTATGAGCGATATCGAACAT
Erwinia amylovora ATCC 49946 EAM_3265 -124 4 AGACGTTATCGGCATCACGCAT
Yersinia pestis KIM y3891 -129 4.4 AAATGTTACCTCCATCACGCAT
Serratia proteamaculans 568 Spro_4642 -129 3.6 AACTGTTACCTCTATCACGCCT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4141 -144 4.3 TAATGTGACAACTATCATCATA
-124 4.4 TATTGTTAGCTTCATCACGCAT
Edwardsiella tarda EIB202 ETAE_3312 -124 4.3 TTGTGTTATCCGCATCGCGTAA
Proteus mirabilis HI4320 PMI2930 -129 4.4 AATTGTTATTTATATCACGCAG
Position: -137
Score: 3.8
Sequence: AAACGTGCTATTGGTAACATCA
Position: -104
Score: 4.7
Sequence: TAGAGTGATATGTATAACATTA
Locus tag: SARI_04096
SARI_04096 -137 3.8 AAACGTGCTATTGGTAACATCA
-104 4.7 TAGAGTGATATGTATAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpE
Ortholog function: thiosulfate sulfurtransferase
Escherichia coli str. K-12 substr. MG1655 b3425 -95 4.7 TAGAGTGATATGTATAACATTA
Salmonella typhimurium LT2 STM3525 -104 4.7 TAGAGTGATATGTATAACATTA
Citrobacter koseri ATCC BAA-895 CKO_04844 -108 4.6 TAGAGTGATACATATAACATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03791 -107 4.3 TGAAGTGATGGGTGTAACATAT
Enterobacter sp. 638 Ent638_3834 -257 3.8 ATGTTCGATATCGCTCATAATA
-196 4.6 TTGAGTGATAGAGATAACATAA
Erwinia amylovora ATCC 49946 EAM_3264 -134 3.9 ATGCGTGATGCCGATAACGTCT
Photorhabdus luminescens subsp. laumondii TTO1 plu0197 -102 3.6 TAACGTATTACTGATAACAAAT
Position: -142
Score: 4.3
Sequence: AATTGTGACAGAGTGCAAATTC
Locus tag: SARI_04099
SARI_04099 -142 4.3 AATTGTGACAGAGTGCAAATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: malT
Ortholog function: transcriptional regulator MalT
Escherichia coli str. K-12 substr. MG1655 b3418 -142 4.3 AATTGTGACACAGTGCAAATTC
Salmonella typhimurium LT2 STM3515 -143 4.3 AATTGTGACAGAGTGCAAATTC
Citrobacter koseri ATCC BAA-895 CKO_04840 -142 4.3 AATTGTGACAGAGTGCAAATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03788 -142 4.4 ATTTGTGACATAGAGCAAATTC
Enterobacter sp. 638 Ent638_3831 -142 4.6 AATTGTGACAGAGTGCAAATTA
Yersinia pestis KIM y3900 -202 4.6 AATTGTGATCCGTAGCAACTTA
Serratia proteamaculans 568 Spro_4637 -203 4 AAGTGTGATCAATAGCAATATA
Edwardsiella tarda EIB202 ETAE_3303 -212 3.8 AAATGTGATCAGCCGCAATTTC
Position: -236
Score: 4.4
Sequence: TAATATGACCTGTGTCTCATAA
Locus tag: SARI_04102
SARI_04102 -236 4.4 TAATATGACCTGTGTCTCATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: gluconate transporter
Enterobacter sp. 638 Ent638_3828 -236 4.1 TAACATGACCTGTGTCTCATAA
Position: -241
Score: 4
Sequence: GAATGCGATTACAGTCACATTA
Position: -107
Score: 3.9
Sequence: AATCGTGATTTTGTCCAGATAC
Locus tag: SARI_04115
SARI_04115 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: pck
Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49)
Escherichia coli str. K-12 substr. MG1655 b3403 -240 4.2 GAATGCGATTCCACTCACAATA
-137 4 TTTCGTGACAGGAATCACGGAG
Salmonella typhimurium LT2 STM3500 -241 4 GAATGCGATTACAGTCACATTA
-107 3.9 AATCGTGATTTTGTCCAGATAC
Citrobacter koseri ATCC BAA-895 CKO_04825 -107 3.9 AATCGTGATTTTGTCCAGATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03773 -242 3.7 GAAAGCGATTACATTCACATTT
-138 3.7 CTTCGTGACAGGAGTCACCGTT
Enterobacter sp. 638 Ent638_3816 -241 4.1 GTATGCGATTACATTCACATTA
Yersinia pestis KIM y3918 -130 4.2 ATTCGTGTTCCATCTCTCATAA
-80 3.8 ATATTTGATAGCTATCGCTGTT
Serratia proteamaculans 568 Spro_4617 -80 4.1 ATATTTGATACCTATCGCGGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4106 -81 4 TTTTATGATTGCTATCGCGGTT
Edwardsiella tarda EIB202 ETAE_3277 -82 3.9 TTTTTTGATGACTATCTCGGTT
Proteus mirabilis HI4320 PMI3015 -131 4 ATTTGTGCATTAGTTCTCGTTA
Photorhabdus luminescens subsp. laumondii TTO1 plu0100 -86 3.8 TTTTTTGATAACTATCGCTGTT
Position: -21
Score: 3.7
Sequence: AACCGTGCGGTATATCGCACAA
Locus tag: SARI_04121
SARI_04121 -21 3.7 AACCGTGCGGTATATCGCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nudE
Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-)
Escherichia coli str. K-12 substr. MG1655 b3397 -53 3.7 AAGCGTGTCCGATATCGCACAA
Citrobacter koseri ATCC BAA-895 CKO_04820 -54 4.1 AACCGTGCTGTATATCGCACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03768 -54 4 AAGCGTGTTGCGTATCGCACAA
Enterobacter sp. 638 Ent638_3810 -55 3.6 AACCGTGCGTCATATCGCACAA
Yersinia pestis KIM y3923 -247 4.5 CAATGTGATCAAGTTCTAATAT
Serratia proteamaculans 568 Spro_4612 -135 4.4 CAATGTGATCAAGATCGGATTT
Edwardsiella tarda EIB202 ETAE_3268 -116 3.6 AAATATGAGCATCTGCGCACAA
Position: -76
Score: 3.4
Sequence: GAATTTGATTTACATCAATAAG
Locus tag: SARI_04140
SARI_04140 -76 3.4 GAATTTGATTTACATCAATAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: nitrite reductase (NAD(P)H) subunit
Escherichia coli str. K-12 substr. MG1655 b3365 -124 3.2 AAAATTTATACAAATCAGCAAT
-76 3.4 GAATTTGATTTACATCAATAAG
Salmonella typhimurium LT2 STM3474 -76 3.4 GAATTTGATTTACATCAATAAG
Citrobacter koseri ATCC BAA-895 CKO_04789 -76 3.4 GAATTTGATTTACATCAATAAG
Enterobacter sp. 638 Ent638_3793 -76 3.3 GTATTTGATTTGCATCAATAAG
Yersinia pestis KIM y3945 -75 3.7 CAAATTGATTTACATCAAGAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4079 -186 4.2 AAGCGTGCTATAGATCTCACTT
Proteus mirabilis HI4320 PMI1479 -129 3.5 TTTTGTGCACTTTATTAACAAT
Position: -136
Score: 5.1
Sequence: TAGCGTGATCAACATCACATTA
Locus tag: SARI_04142
SARI_04142 -136 5.1 TAGCGTGATCAACATCACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfC
Ortholog function: Predicted purine nucleoside transporter, MFS superfamily
Salmonella typhimurium LT2 STM3473 -137 5 TGATGTGACAAACATCACATTA
-84 3.8 ATTATTTAAATGCATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03750 -140 5.3 AAGCGTGATGCAGATCACATTA
-109 3.7 AAAGATAACCCATTTCACAATA
Enterobacter sp. 638 Ent638_3791 -206 4.8 AAAAGTGACTTAGATCACATTG
Serratia proteamaculans 568 Spro_2681 -82 4.3 AATTGTGAACCCGATCACTTCA
Position: -161
Score: 5.3
Sequence: TAATGTGATGTTGATCACGCTA
Locus tag: SARI_04143
SARI_04143 -161 5.3 TAATGTGATGTTGATCACGCTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ppiA
Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b3363 -204 4.2 TTTTGTGATCTGTTTAAATGTT
-151 4.2 AGAGGTGATTTTGATCACGGAA
Salmonella typhimurium LT2 STM3472 -214 4.3 TTTTGTGATGCATTTAAATAAT
-161 5.1 TAATGTGATGTTTGTCACATCA
Citrobacter koseri ATCC BAA-895 CKO_04785 -215 3.7 TTTAGTGATGTATTTAAATGTT
-162 5.2 TAACGTGACATTGATCACATTA
Position: -159
Score: 3.1
Sequence: TACATTGACGTACTGCATGTAT
Locus tag: SARI_04149
SARI_04149 -159 3.1 TACATTGACGTACTGCATGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: crp
Ortholog function: cyclic AMP receptor protein
Escherichia coli str. K-12 substr. MG1655 b3357 -154 3.3 TACATTGATGTACTGCATGTAT
-136 3.3 GTATGCAAAGGACGTCACATTA
Salmonella typhimurium LT2 STM3466 -159 3.1 TACATTGACGTACTGCATGTAT
Citrobacter koseri ATCC BAA-895 CKO_04777 -160 3.1 TACATTGACGTACTGCATGTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03743 -158 3.3 TACATTGATGTACTGCATGTAT
Enterobacter sp. 638 Ent638_3784 -128 2.9 AAACATTACAGGCTGCAAACAT
Yersinia pestis KIM y3956 -309 3 AATTTAGACTACCCTTTCATTT
Serratia proteamaculans 568 Spro_4580 -121 3.5 ATTTATGACACGCCTCAAAACC
Proteus mirabilis HI4320 PMI2820 -135 3.3 TATTATAATCTATTCCTTATTA
Position: -188
Score: 3.9
Sequence: TAATGTGATGTCCTCTGCATAC
Locus tag: SARI_04150
SARI_04150 -188 3.9 TAATGTGATGTCCTCTGCATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhfA
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3356 -187 4.2 TAATGTGACGTCCTTTGCATAC
Salmonella typhimurium LT2 STM3465 -188 3.9 TAATGTGATGTCCTCTGCATAC
Citrobacter koseri ATCC BAA-895 CKO_04775 -187 3.3 GAATGTGATGTCCTCTGCATAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03742 -188 3.5 TAATGTGAACTCCTCTGCATAC
Serratia proteamaculans 568 Spro_4579 -280 3.3 GGTTTTGAGGCGTGTCATAAAT
Position: -222
Score: 3.9
Sequence: TTGTGTGAAGTGATTCACAGCC
Locus tag: SARI_04228
SARI_04228 -222 3.9 TTGTGTGAAGTGATTCACAGCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrdA
Ortholog function: carbonic anhydrase, family 3
Escherichia coli str. K-12 substr. MG1655 b3279 -220 3.8 TCCTGTGAAGTGTTTCACGTTG
Salmonella typhimurium LT2 STM3399 -222 4.3 TTGTGTGAAGTGATTCACATCC
Citrobacter koseri ATCC BAA-895 CKO_04691 -221 3.9 TCTTGTGAAGCGTTTCACTTTG
-81 3.8 ATTTTTGATACCTGAAACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03680 -221 4.6 TTGTGTGAAGTGATTCACATCT
Enterobacter sp. 638 Ent638_3711 -222 4.6 TTGTGTGAAGTGATTCACATCT
-47 3.6 TAATGCGATCAAAGTCTTCTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3993 -105 3.6 TTACTCGATCCGTGTCACTTTT
Edwardsiella tarda EIB202 ETAE_3192 -235 4.1 TCCTGTGATGTTGTTCACATGT
Position: -55
Score: 4.7
Sequence: GTATGTGATCTAAATCACTTTT
Locus tag: SARI_04266
SARI_04266 -55 4.7 GTATGTGATCTAAATCACTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aaeR
Ortholog function: LysR-family transcriptional regulator
Escherichia coli str. K-12 substr. MG1655 b3243 -37 5.3 TTATGTGATCTAAATCACTTTT
Salmonella typhimurium LT2 STM3367 -37 5.3 TTATGTGATCTAAATCACTTTT
Citrobacter koseri ATCC BAA-895 CKO_04651 -37 5.3 ATATGTGATCTAAATCACTTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03652 -55 5.1 ATGTGTGATCTAAATCACTTTT
Enterobacter sp. 638 Ent638_3680 -37 5.3 ATATGTGATCTAAATCACTTTT
Erwinia amylovora ATCC 49946 EAM_3128 -37 5.3 AAATGTGATCTAAATCACTTTT
Yersinia pestis KIM y0180 -55 5.1 ATGTGTGATCTAAATCACTTTT
Serratia proteamaculans 568 Spro_4393 -37 4.9 ATCTGTGATCTAAATCACTTTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0276 -37 5.1 TAGTGTGATCTAAATCACTTTT
Edwardsiella tarda EIB202 ETAE_3129 -131 4.5 ATCTGTGACGCAAATCACTTTT
Position: -166
Score: 5.1
Sequence: AAAAGTGATTTAGATCACATAC
Locus tag: SARI_04267
SARI_04267 -166 5.1 AAAAGTGATTTAGATCACATAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcR
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3242 -167 5.4 AAAAGTGATTTAGATCACATAA
Salmonella typhimurium LT2 STM3366 -166 5.4 AAAAGTGATTTAGATCACATAA
Citrobacter koseri ATCC BAA-895 CKO_04650 -168 5.4 AAAAGTGATTTAGATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03651 -116 5.2 AAAAGTGATTTAGATCACACAT
-63 3.7 TATTGTTAGCTACATAATAAAC
Enterobacter sp. 638 Ent638_3679 -165 5.4 AAAAGTGATTTAGATCACATAT
Yersinia pestis KIM y0179 -269 5.2 AAAAGTGATTTAGATCACACAT
Serratia proteamaculans 568 Spro_4392 -293 5.1 AAAAGTGATTTAGATCACAGAT
-89 3.8 ATTTGTGGTGCGTGTCAGCTAA
Position: -60
Score: 5.3
Sequence: TTTTGTGATGAGGGTCACAAAA
Locus tag: SARI_04272
SARI_04272 -60 5.3 TTTTGTGATGAGGGTCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcN
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3238 -60 5.1 TTTTGTGATATGGGTCACGAAA
Salmonella typhimurium LT2 STM3361 -60 5 TTTTGTGATGAGGGTCACGAAA
Citrobacter koseri ATCC BAA-895 CKO_04644 -60 5 TTTTGTGATGAGGGTCACGAAA
Enterobacter sp. 638 Ent638_3673 -58 5 TTTTGTGATGAGGGTCACGAAA
Position: -113
Score: 4.4
Sequence: TTTAGTGAAGCAGATCGCACTA
Locus tag: SARI_04285
SARI_04285 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nanA
Ortholog function: N-acetylneuraminate lyase (EC 4.1.3.3)
Escherichia coli str. K-12 substr. MG1655 b3225 -115 4.6 TTTAGTGAAGCAGATCGCATTA
Salmonella typhimurium LT2 STM3339 -113 4.4 TTTAGTGAAGCAGATCGCACTA
Citrobacter koseri ATCC BAA-895 CKO_04629 -116 4.2 TTTAGTGAAGTAGATCGCACTC
Enterobacter sp. 638 Ent638_3661 -112 4.6 TTTAGTGAAGCAGATCGCATTA
Edwardsiella tarda EIB202 ETAE_1381 -141 4.5 TTTAGTGAACTAGATCGCACAA
Position: -91
Score: 3.8
Sequence: ATTTGTTACATTAATCATTTAA
Position: -69
Score: 3.6
Sequence: ATGTGTGAAGCGTAGCATTTTA
Locus tag: SARI_04298
SARI_04298 -91 3.8 ATTTGTTACATTAATCATTTAA
-69 3.6 ATGTGTGAAGCGTAGCATTTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: elbB
Ortholog function: sigma cross-reacting protein 27A (SCRP-27A)
Escherichia coli str. K-12 substr. MG1655 b3209 -91 3.7 ATTTGTTACATGAATCAGTTAA
-69 4 ATGTGTGATGCGTACCATTTTT
Salmonella typhimurium LT2 STM3327 -91 3.9 ATTTGTTACATGAATCATTTAA
-69 3.6 ATGTGTGAAGCGTAGCATTTTA
Citrobacter koseri ATCC BAA-895 CKO_04612 -92 3.7 TTTTGTTACATGAATCAGTTAA
-70 3.6 ATGTGTGAAGCGCAGCATTTTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03618 -93 3.6 ATTTGTTACATGAATCAGTAAA
-71 3.8 ATATGTGAAGCATAGCGAGTTA
Serratia proteamaculans 568 Spro_4341 -72 3.7 ATGTGTGATGTAGATTAGTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0316 -72 3.7 ATGTGTGATGTAGATTAGTGTT
Proteus mirabilis HI4320 PMI3679 -174 4.1 TTTTTTGATTATCATTACATAG
Position: -48
Score: 4.4
Sequence: TACTTTGAGCCGGTTCACACTT
Locus tag: SARI_04344
SARI_04344 -48 4.4 TACTTTGAGCCGGTTCACACTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: deaD
Ortholog function: ATP-independent RNA helicase
Salmonella typhimurium LT2 STM3280.S -154 3.9 CTTTTTGATTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACTT
Citrobacter koseri ATCC BAA-895 CKO_04559 -103 3.9 CTTTTTGATTGCCATCACCTTC
-48 4.4 TACTTTGAGCCGGTTCACACTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03570 -154 3.8 TTTTTTGCTTGCCATCACCTTC
-99 4.4 TACTTTGAGCCGGTTCACACAT
Enterobacter sp. 638 Ent638_3599 -154 4.1 TCTTATGATTGCCATCACCTTA
-99 4.4 TACTTTGAGCCGGTTCACACTT
Erwinia amylovora ATCC 49946 EAM_3065 -99 4.8 TAATTTGAGCCGGTTCACACTT
Yersinia pestis KIM y0696 -96 4.8 TAATTTGAGCCGGTTCACACTT
Serratia proteamaculans 568 Spro_0495 -96 4.8 TAATTTGAGCCGGTTCACACTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0718 -96 4.4 CAATTTGAGCCGGTTCACACTT
Edwardsiella tarda EIB202 ETAE_0411 -96 4.8 TAATTTGAGCCGGTTCACACTT
Proteus mirabilis HI4320 PMI3424 -80 5 TAATTTGAGCCAGTTCACATTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4523 -95 5 TAATTTGAGCCAGTTCACATTT
Position: -153
Score: 4.3
Sequence: TGCGGTGATCTGGATCACATTC
Locus tag: SARI_04366
SARI_04366 -153 4.3 TGCGGTGATCTGGATCACATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: garD
Ortholog function: D-galactarate dehydratase
Escherichia coli str. K-12 substr. MG1655 b3128 -210 4.2 TATTTTGAGCATATGCACATAA
-127 4.4 ATGATTGACATTGATCACATTT
-52 3.7 AAATGAGACCAGGTCCTCATTT
Salmonella typhimurium LT2 STM3250 -153 4.3 TGCGGTGATCTGGATCACATTC
Citrobacter koseri ATCC BAA-895 CKO_04527 -54 4 AGTTGTTCTCTTTAACACATTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03540 -125 4.8 AGGAGTGATGCCGATCACATTT
Enterobacter sp. 638 Ent638_3570 -143 4.7 AGGGGTGATCTTGATCACATTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3578 -296 4.2 TAGTGCGAGGTATTTCACGAAA
-204 5.1 AAATGTGATCAAACTCACCAAA
Position: -83
Score: 4.8
Sequence: ATTTGTGAGTGGTAGCACATAA
Locus tag: SARI_04374
SARI_04374 -83 4.8 ATTTGTGAGTGGTAGCACATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tdcA
Ortholog function: Threonine catabolic operon transcriptional activator TdcA
Escherichia coli str. K-12 substr. MG1655 b3118 -225 4 TGATGTTATCGCCATAAAATAT
-82 4.7 ATTTGTGAGTGGTCGCACATAT
Salmonella typhimurium LT2 STM3245 -188 3.9 TTTTTTGATTGAAATCAGGCTA
-83 4.7 ATTTGTGAGTGGTCGCACATAA
Citrobacter koseri ATCC BAA-895 CKO_04518 -225 4.3 ATATGTTATCGCCATAAAATAT
-187 3.9 TTTTTTGACAAAAATCATGATA
-82 4.6 ATTTGTGAGTAGTCGCACATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02296 -82 4.6 CTTTGTGAGAGCTCTCACATAA
-54 3.7 AATTGCGATTTGTTACACTTTC
Enterobacter sp. 638 Ent638_3565 -82 3.9 ATTTGTGAGTAACAGCACATCC
Position: -229
Score: 4.7
Sequence: TGTTGTGATCCTCTTCAAATAG
Locus tag: SARI_04380
SARI_04380 -229 4.7 TGTTGTGATCCTCTTCAAATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhaO
Ortholog function: hypothetical protein
Escherichia coli str. K-12 substr. MG1655 b3110 -228 4.6 TTTTGTGATCTGCCGCAAATAG
Salmonella typhimurium LT2 STM3239 -230 4.5 TGTTGTGATACGCGTCAAATAG
Citrobacter koseri ATCC BAA-895 CKO_04511 -180 4.7 TGTTGTGATCTGCTTCAAGAAT
Position: -101
Score: 4.3
Sequence: TTTTTTGAATCTCATCACAATC
Locus tag: SARI_04408
SARI_04408 -101 4.3 TTTTTTGAATCTCATCACAATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadH
Ortholog function: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase)
Escherichia coli str. K-12 substr. MG1655 b3081 -112 3.9 CTTTTTGAATCCCATCACAAAC
Salmonella typhimurium LT2 STM3219 -113 4.3 TTTTTTGAATCCCATCACAATC
Citrobacter koseri ATCC BAA-895 CKO_04487 -113 4.3 TTTTTTGAATCCCATCACAATC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03510 -111 3.9 TTCTTTGAATCCCATCACAATC
Enterobacter sp. 638 Ent638_3539 -111 3.9 ATCTTTGAATCCCATCACATTC
Erwinia amylovora ATCC 49946 EAM_0507 -169 3.8 AACCGTGACTGAGATCGCTAAA
Yersinia pestis KIM y3589 -131 4 ATTCATGACGGCTATCACAATC
Serratia proteamaculans 568 Spro_4309 -126 4.2 ATTCATGACATCTATCACATTC
Proteus mirabilis HI4320 PMI3702 -213 3.8 TATTATTATATGATTAAAAAAT
-103 3.8 TTCCATGATTAAGATCACAACT
Photorhabdus luminescens subsp. laumondii TTO1 plu3990 -161 4.3 TTTCATGACCTTCATCACATTC
Position: -117
Score: 3.7
Sequence: AATTGTGACTCTACGCATTAAA
Locus tag: SARI_04431
SARI_04431 -117 3.7 AATTGTGACTCTACGCATTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glgS
Ortholog function: glycogen synthesis protein GlgS
Escherichia coli str. K-12 substr. MG1655 b3049 -225 3.4 AATAGTTTCCTTGCTTACATTT
-203 3.4 ATCTGTGTTAATAATAACACAG
-124 3.8 AAGTGTGATCGGGGACAATATA
Salmonella typhimurium LT2 STM3197 -222 3.3 TCGCGTGATAATTTTCATGCTT
-178 4.2 TCATGTGACCCATATCTCCTTA
-117 4.2 TATTGTGATTTTGCGCATTAAA
Citrobacter koseri ATCC BAA-895 CKO_04437 -118 3.4 AAGTGTGATGTCAGGCAACTGA
Position: -156
Score: 4.5
Sequence: ATTTGTGATTTGGTTATCCAAT
Locus tag: SARI_04491
SARI_04491 -156 4.5 ATTTGTGATTTGGTTATCCAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxuA
Ortholog function: Mannonate dehydratase (EC 4.2.1.8)
Escherichia coli str. K-12 substr. MG1655 b4322 -271 3.8 TGTTGCGATGAATGTCACATCC
-186 4.5 TCTTGTGATGTGGTTAACCAAT
Salmonella typhimurium LT2 STM3135 -205 4.3 AAAATTGACACAGATCAAATAA
-155 4.6 ATTTGTGATTTGGTTAGCCAAT
Citrobacter koseri ATCC BAA-895 CKO_00609 -115 3.9 GATTGTGAGCTGGATCAATCAA
Enterobacter sp. 638 Ent638_2767 -116 3.9 TTCTGTGAGTTGGATCAATCAA
Serratia proteamaculans 568 Spro_3238 -167 3.9 AACCGTGAAGTGGATCAACCAA
-48 4.1 AATCTTGATCACCACCACAATA
Edwardsiella tarda EIB202 ETAE_2289 -188 4.2 AATCGTGAGGCGGATCAACCAA
Position: -164
Score: 3.8
Sequence: AAGTGTTAACTCAGTCACCCTT
Position: -50
Score: 4
Sequence: AAATGTGCCTTTGAAAACATTA
Locus tag: SARI_04533
SARI_04533 -164 3.8 AAGTGTTAACTCAGTCACCCTT
-50 4 AAATGTGCCTTTGAAAACATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nupG
Ortholog function: Nucleoside permease NupG
Escherichia coli str. K-12 substr. MG1655 b2964 -166 5.2 AAATGTTATCCACATCACAATT
-116 3.8 TTATTTGCCACAGGTAACAAAA
Salmonella typhimurium LT2 STM3113 -166 3.9 AAGTGTTAACTCCGTCACCCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Citrobacter koseri ATCC BAA-895 CKO_04339 -166 3.9 AAGTGTTAACTCCATCACTCTT
-116 3.6 ATATTTGTCACAGGTAACAAAA
-50 3.6 AAATGTGCCTTTTAAAACATTC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03396 -49 4.2 TAATGTTATTTTAAAAACATAA
Enterobacter sp. 638 Ent638_3369 -163 4.5 AAACGTTATTTGCATCACAATC
-114 3.7 TTTTTTGCGGGAGGTAACAAAA
Position: -125
Score: 4.3
Sequence: TTTTGTTATCCATCTCTAAAAA
Locus tag: SARI_04540
SARI_04540 -125 4.3 TTTTGTTATCCATCTCTAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ansB
Ortholog function: periplasmic L-asparaginase II
Escherichia coli str. K-12 substr. MG1655 b2957 -125 4 TTTTGTTACCTGCCTCTAACTT
Salmonella typhimurium LT2 STM3106 -125 4.3 TTTTGTTATCCATCTCTAAAAA
Citrobacter koseri ATCC BAA-895 CKO_04332 -125 3.6 TTTTGATATCCATCTCTAAAAA
Proteus mirabilis HI4320 PMI0708 -81 3.6 ATTCGTTCTATTTATCACGGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1616 -76 3.8 AAGTCTGGTATGTATCACAGAT
Position: -84
Score: 5.1
Sequence: CATTGTGATTGCCCTCACATAT
Locus tag: SARI_04554
SARI_04554 -84 5.1 CATTGTGATTGCCCTCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: galP
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2943 -156 3.6 TATGATGATATAACTCAATTAT
-82 4.9 TGATGTGATTTGCTTCACATCT
Salmonella typhimurium LT2 STM3091 -83 4.6 CATTGTGATTAGCCTCACATCT
Citrobacter koseri ATCC BAA-895 CKO_04318 -83 5.3 TAACGTGATTCGAATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03376 -84 3.8 AGCCGTGATTATAGTCACGTTT
Enterobacter sp. 638 Ent638_3347 -171 3.9 TATTGGGATGCACATCAACTCT
-102 3.7 TAGTGTAACCGATTACACCAAT
-84 5.3 CAATGTGATTTATCTCACATAT
Erwinia amylovora ATCC 49946 EAM_2827 -152 4.1 TCATGTGATCTGTCGCACAGTC
Serratia proteamaculans 568 Spro_1160 -276 4.5 TGGTGTGATATCGGTTACATTT
-100 3.6 TTGTGTAATCGTTTCCACTAAT
-82 4.6 TAATGTGATCGCACTCACTTAC
Edwardsiella tarda EIB202 ETAE_2966 -275 3.7 CAAAGTGAAAACGATTACATTT
-61 4.5 TTATGTGATCATGCGCACTTTA
Position: -213
Score: 4.9
Sequence: AAATGTGATACAGGTCAGATAA
Locus tag: SARI_04575
SARI_04575 -213 4.9 AAATGTGATACAGGTCAGATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: epd
Ortholog function: D-erythrose 4-phosphate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2927 -213 4.7 AAGTGTGATGTGAGTCAGATAA
Salmonella typhimurium LT2 STM3070 -213 5 AAATGTGATGCAGGTCAGATAA
Citrobacter koseri ATCC BAA-895 CKO_04297 -213 4.8 AAGTGTGATGCAGGTCAGATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03356 -213 4.8 AAATGTGATGTGAGTCATATAG
Enterobacter sp. 638 Ent638_3340 -215 4.5 AAATGTGACGCAAGTCATATAG
Erwinia amylovora ATCC 49946 EAM_2813 -208 4.1 TTTTGTGACGCAGATCGAAAGT
Yersinia pestis KIM y3309 -216 3.7 AATTGTGCCCTTTTTCAGGGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3913 -194 4.1 TTTTATGACGCAGGTCACTCTT
Edwardsiella tarda EIB202 ETAE_2958 -233 4.9 AATTGTGATGCAATGCACGTTT
Proteus mirabilis HI4320 PMI0241 -253 4.4 AAATGTTAACAAGAGCACATTT
Position: -167
Score: 4.5
Sequence: TTTGGTGACATGTATCACGTTT
Locus tag: SARI_04588
SARI_04588 -167 4.5 TTTGGTGACATGTATCACGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: serA
Ortholog function: D-3-phosphoglycerate dehydrogenase
Escherichia coli str. K-12 substr. MG1655 b2913 -210 4.1 TTTGGTGACATGTGTCACGCTT
Salmonella typhimurium LT2 STM3062 -217 4.5 TTTGGTGACATGTATCACGTTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03348 -214 4.6 TTTGGTGACTTCTGTCACATTT
Enterobacter sp. 638 Ent638_3332 -215 4.1 TTCGGTGACTTGTATCACGTTT
Yersinia pestis KIM y3301 -126 4.8 TTTGGTGATATATATCACATTC
Serratia proteamaculans 568 Spro_3923 -215 4.4 TTTGGTGACATATGTCACATTG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3905 -214 3.9 TTTGGTACTTAATATCACATTT
Proteus mirabilis HI4320 PMI2031 -210 4 TTCAGTGATATATATCACACGA
Photorhabdus luminescens subsp. laumondii TTO1 plu3605 -207 4.4 TTTAGTGATATATTTCATATCT
-178 4.2 TTATTTGATCTAAATCCTAATT
-105 4.4 TTATGTGATGGGAATAGCAATC
Position: -190
Score: 4.9
Sequence: AAGTGTAATATCCATCACATAT
Locus tag: SARI_04640
SARI_04640 -190 4.9 AAGTGTAATATCCATCACATAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: araE
Ortholog function: sugar transporter
Escherichia coli str. K-12 substr. MG1655 b2841 -131 4.4 AATTGGAATATCCATCACATAA
Salmonella typhimurium LT2 STM3016 -271 4 TTTTATGATCTCATTAGCATAG
-131 4.9 AAGTGTAATATCCATCACATAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03264 -191 4.4 AAGTTTAATGTCCATCACAAAA
Enterobacter sp. 638 Ent638_3294 -209 3.7 CGAGATGACATCGATCACATTT
-130 4.1 AATTGGAATATCCATCACAGAA
Position: -213
Score: 4.7
Sequence: TAAAGTGATGATAATCACAGAA
Position: -173
Score: 4.9
Sequence: AAATGTGACCGCCATCATATTA
Locus tag: SARI_04687
SARI_04687 -213 4.7 TAAAGTGATGATAATCACAGAA
-173 4.9 AAATGTGACCGCCATCATATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucP
Ortholog function: L-fucose permease
Escherichia coli str. K-12 substr. MG1655 b2801 -207 4.9 TAAAGTGATGGTAGTCACATAA
-167 4.5 AAGTGTGACCGCCGTCATATTA
Citrobacter koseri ATCC BAA-895 CKO_04160 -219 5 TAAAGTGATGATAATCACATAA
-179 4.8 AAATGTGACCACCATCATATTA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03152 -260 4.7 TAAAGTGACAATAATCACATAA
-220 4.6 AAGTGTGACCATCATCATATTA
Position: -157
Score: 4.8
Sequence: TTAATTGATGTGTATCACAAAA
Locus tag: SARI_04688
SARI_04688 -157 4.8 TTAATTGATGTGTATCACAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fucA
Ortholog function: L-fuculose phosphate aldolase
Escherichia coli str. K-12 substr. MG1655 b2800 -144 4.1 TTAGTTGAACCAGGTCACAAAA
-54 4 TAGTGTGAAAGGAACAACATTA
Salmonella typhimurium LT2 STM2974 -157 4.8 TTAATTGATGTGAATCACAAAA
Citrobacter koseri ATCC BAA-895 CKO_04159 -144 4.7 TTAATTGATGCGTATCACAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03151 -155 4.4 ATAATTGACGCGGCTCACAAAA
Edwardsiella tarda EIB202 ETAE_0293 -175 4.2 AGTCTTGATGACGGTCACAAAA
Position: -176
Score: 4.2
Sequence: ATTTGAGATCGCGATCACTGAT
Locus tag: SARI_04693
SARI_04693 -176 4.2 ATTTGAGATCGCGATCACTGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaC
Ortholog function: Serine transporter
Escherichia coli str. K-12 substr. MG1655 b2796 -179 4.2 ATTTGAGATCAAGATCACTGAT
Salmonella typhimurium LT2 STM2970 -176 4.2 ATTTGAGATCGGGATCACTGAT
Citrobacter koseri ATCC BAA-895 CKO_04152 -176 4.1 ATTTGGGATCGCGATCACTGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03139 -158 4.2 ATTTGAGATCGCGATCACTGAT
Enterobacter sp. 638 Ent638_3249 -176 4.1 ATTTGGGATCAGGATCACTGAT
Erwinia amylovora ATCC 49946 EAM_1294 -300 3.6 ATTTGTTAAAAATCGCAAAAAA
-180 3.9 AAATGTGATTCCGATCACCGGC
Yersinia pestis KIM y2862 -286 4.3 AATTGAGATCACGATCACGGTA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3158 -195 3.7 TTCTGTGATCGCCTCAATATTA
Proteus mirabilis HI4320 PMI0672 -283 4.3 ATTTGAGATGGTGATCACGGTA