Propagation of Fnr regulog to Buchnera aphidicola str. Cc (Cinara cedri)
| Source regulog: | Fnr - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Energy metabolism; Anaerobic metabolism |
| Effector: | Oxygen |
| Phylum: | Gammaproteobacteria |
| Propagated regulon: | |
| Target genome | Buchnera aphidicola str. Cc (Cinara cedri) |
| Orthologous TF(s) | No orthologous TFs found |
| Regulated genes | 14 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -42
Score: 3.4 Sequence: TTTTTATTTATAAA
Locus tag: BCc_071
|
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| BCc_071 | -42 | 3.4 | TTTTTATTTATAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gnd | ||||
| Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00756 | -337 | 4 | TTGATTACTATCTA |
| Enterobacter sp. 638 | Ent638_2642 | -112 | 3.7 | GTGACATAGATCAG |
| Erwinia amylovora ATCC 49946 | EAM_2150 | -264 | 3.8 | TTCTCTTAAGTCAA |
| -169 | 4 | TTTTTTTTAAACAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1444 | -228 | 3.3 | TTGAGTGGTAACAT |
| Escherichia coli str. K-12 substr. MG1655 | b2029 | -375 | 3.4 | ATGGCTTCGATCAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02499 | -322 | 3.7 | TTTTTATAGTTCAA |
| Proteus mirabilis HI4320 | PMI0655 | -7 | 3.7 | TTATTTCATGTCAA |
| Serratia proteamaculans 568 | Spro_1608 | -384 | 3.3 | ATTATTTGAATTAA |
|
Position: -250
Score: 4.5 Sequence: TTGTTCTGCATCAA
Position: -102
Score: 3.7 Sequence: TTTATTGATATTAA
Position: -98
Score: 5.2 Sequence: TTGATATTAATCAA
Locus tag: BCc_097
|
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| BCc_097 | -250 | 4.5 | TTGTTCTGCATCAA | |
| -102 | 3.7 | TTTATTGATATTAA | ||
| -98 | 5.2 | TTGATATTAATCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoA | ||||
| Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00508 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2385 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2288 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02678 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3089 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2328 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3308 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1630 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -65
Score: 3.8 Sequence: TTTTTATAAATAAA
Position: -47
Score: 3.7 Sequence: TTTATTAAATACAA
Locus tag: BCc_098
|
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| BCc_098 | -65 | 3.8 | TTTTTATAAATAAA | |
| -47 | 3.7 | TTTATTAAATACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoB | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00509 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2384 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2287 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02677 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3088 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2327 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3307 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1631 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -151
Score: 4.1 Sequence: TTGTTTTTTATAAA
Position: -64
Score: 3.6 Sequence: TGGATTTAAAAAAA
Position: 11
Score: 3.6 Sequence: TTTATTTAAATTAT
Locus tag: BCc_099
|
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| BCc_099 | -151 | 4.1 | TTGTTTTTTATAAA | |
| -64 | 3.6 | TGGATTTAAAAAAA | ||
| 11 | 3.6 | TTTATTTAAATTAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoD | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00510 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2383 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2286 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02676 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3087 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2326 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3306 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1632 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -30
Score: 3.7 Sequence: TTTATTTGTATAAA
Position: 4
Score: 3.9 Sequence: TTGAATTAAGTAAA
Locus tag: BCc_100
|
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| BCc_100 | -30 | 3.7 | TTTATTTGTATAAA | |
| 4 | 3.9 | TTGAATTAAGTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoE | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00511 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2382 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2285 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02675 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3086 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2325 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3305 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1633 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -61
Score: 3.6 Sequence: TTTTTTTAAAAAAA
Locus tag: BCc_102
|
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| BCc_102 | -61 | 3.6 | TTTTTTTAAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoG | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00513 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2380 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2283 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02673 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3084 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2323.S | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3303 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1635 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -3
Score: 3.5 Sequence: TTTATGAATATGAA
Position: 25
Score: 3.6 Sequence: GTTTTTTAAGTCAA
Locus tag: BCc_104
|
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| BCc_104 | -3 | 3.5 | TTTATGAATATGAA | |
| 25 | 3.6 | GTTTTTTAAGTCAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoI | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00515 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2378 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2281 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02671 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3082 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2321 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3301 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1637 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: 19
Score: 3.5 Sequence: TTGTTTTATTTCCA
Locus tag: BCc_107
|
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| BCc_107 | 19 | 3.5 | TTGTTTTATTTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoL | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00518 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2375 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2278 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02668 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3079 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2318 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3298 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1640 | -465 | 3.6 | TTTTATTAAAACAA |
|
Position: -113
Score: 3.6 Sequence: ATAATTTAGATAAA
Position: -74
Score: 3.7 Sequence: TTTATTTTTCACAA
Locus tag: BCc_108
|
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| BCc_108 | -113 | 3.6 | ATAATTTAGATAAA | |
| -74 | 3.7 | TTTATTTTTCACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nuoM | ||||
| Ortholog function: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00519 | -198 | 4 | TCGATGTAAATTAA |
| Edwardsiella tarda EIB202 | ETAE_2374 | -292 | 3.7 | TTGATGTAAACGAA |
| Escherichia coli str. K-12 substr. MG1655 | b2277 | -433 | 3.7 | ATGATGTTAAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02667 | -392 | 3.6 | TTGATTTACGACGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3078 | -207 | 3.8 | TTGTTATTTGTAAA |
| Salmonella typhimurium LT2 | STM2317 | -199 | 4.6 | TTGATGTAAATTAA |
| Serratia proteamaculans 568 | Spro_3297 | -280 | 3.8 | TTTCTACACATCAA |
| Yersinia pestis KIM | y1641 | -465 | 3.6 | TTTTATTAAAACAA |