Propagation of Fnr regulog to Buchnera aphidicola str. Cc (Cinara cedri)

Reference regulog properties
Source regulog:	Fnr - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator (repressor)
Biological process:	Energy metabolism; Anaerobic metabolism
Effector:	Oxygen
Phylum:	Gammaproteobacteria
Propagated regulon:
Target genome	Buchnera aphidicola str. Cc (Cinara cedri)
Orthologous TF(s)	No orthologous TFs found
Regulated genes	14

Built upon 685 sites [see more]

Predicted regulatory interactions in *Buchnera aphidicola str. Cc (Cinara cedri)*
	Locus tag	Position	Score	Sequence
Position: -42 Score: 3.4 Sequence: TTTTTATTTATAAA Locus tag: BCc_071
	BCc_071	-42	3.4	TTTTTATTTATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Citrobacter koseri ATCC BAA-895	CKO_00756	-337	4	TTGATTACTATCTA
Enterobacter sp. 638	Ent638_2642	-112	3.7	GTGACATAGATCAG
Erwinia amylovora ATCC 49946	EAM_2150	-264	3.8	TTCTCTTAAGTCAA
		-169	4	TTTTTTTTAAACAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1444	-228	3.3	TTGAGTGGTAACAT
Escherichia coli str. K-12 substr. MG1655	b2029	-375	3.4	ATGGCTTCGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02499	-322	3.7	TTTTTATAGTTCAA
Proteus mirabilis HI4320	PMI0655	-7	3.7	TTATTTCATGTCAA
Serratia proteamaculans 568	Spro_1608	-384	3.3	ATTATTTGAATTAA

Position: -250 Score: 4.5 Sequence: TTGTTCTGCATCAA Position: -102 Score: 3.7 Sequence: TTTATTGATATTAA Position: -98 Score: 5.2 Sequence: TTGATATTAATCAA Locus tag: BCc_097
	BCc_097	-250	4.5	TTGTTCTGCATCAA
		-102	3.7	TTTATTGATATTAA
		-98	5.2	TTGATATTAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00508	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2385	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2288	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02678	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3089	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2328	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3308	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1630	-465	3.6	TTTTATTAAAACAA

Position: -65 Score: 3.8 Sequence: TTTTTATAAATAAA Position: -47 Score: 3.7 Sequence: TTTATTAAATACAA Locus tag: BCc_098
	BCc_098	-65	3.8	TTTTTATAAATAAA
		-47	3.7	TTTATTAAATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoB
Ortholog function: NADH-ubiquinone oxidoreductase chain B (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00509	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2384	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2287	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02677	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3088	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2327	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3307	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1631	-465	3.6	TTTTATTAAAACAA

Position: -151 Score: 4.1 Sequence: TTGTTTTTTATAAA Position: -64 Score: 3.6 Sequence: TGGATTTAAAAAAA Position: 11 Score: 3.6 Sequence: TTTATTTAAATTAT Locus tag: BCc_099
	BCc_099	-151	4.1	TTGTTTTTTATAAA
		-64	3.6	TGGATTTAAAAAAA
		11	3.6	TTTATTTAAATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoD
Ortholog function: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00510	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2383	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2286	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02676	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3087	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2326	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3306	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1632	-465	3.6	TTTTATTAAAACAA

Position: -30 Score: 3.7 Sequence: TTTATTTGTATAAA Position: 4 Score: 3.9 Sequence: TTGAATTAAGTAAA Locus tag: BCc_100
	BCc_100	-30	3.7	TTTATTTGTATAAA
		4	3.9	TTGAATTAAGTAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoE
Ortholog function: NADH-ubiquinone oxidoreductase chain E (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00511	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2382	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2285	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02675	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3086	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2325	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3305	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1633	-465	3.6	TTTTATTAAAACAA

Position: -61 Score: 3.6 Sequence: TTTTTTTAAAAAAA Locus tag: BCc_102
	BCc_102	-61	3.6	TTTTTTTAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoG
Ortholog function: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00513	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2380	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2283	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02673	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3084	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2323.S	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3303	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1635	-465	3.6	TTTTATTAAAACAA

Position: -3 Score: 3.5 Sequence: TTTATGAATATGAA Position: 25 Score: 3.6 Sequence: GTTTTTTAAGTCAA Locus tag: BCc_104
	BCc_104	-3	3.5	TTTATGAATATGAA
		25	3.6	GTTTTTTAAGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoI
Ortholog function: NADH-ubiquinone oxidoreductase chain I (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00515	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2378	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2281	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02671	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3082	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2321	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3301	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1637	-465	3.6	TTTTATTAAAACAA

Position: 19 Score: 3.5 Sequence: TTGTTTTATTTCCA Locus tag: BCc_107
	BCc_107	19	3.5	TTGTTTTATTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoL
Ortholog function: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00518	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2375	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2278	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02668	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3079	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2318	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3298	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1640	-465	3.6	TTTTATTAAAACAA

Position: -113 Score: 3.6 Sequence: ATAATTTAGATAAA Position: -74 Score: 3.7 Sequence: TTTATTTTTCACAA Locus tag: BCc_108
	BCc_108	-113	3.6	ATAATTTAGATAAA
		-74	3.7	TTTATTTTTCACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoM
Ortholog function: NADH-ubiquinone oxidoreductase chain M (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00519	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2374	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2277	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02667	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3078	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2317	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3297	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1641	-465	3.6	TTTTATTAAAACAA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Buchnera aphidicola str. Cc (Cinara cedri)

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --