Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YrkD regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: YrkD - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Multidrug resistance
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) No orthologous TFs found
Regulated genes 3
Built upon 39 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -71
Score: 6
Sequence: ATACCCATAGGGGTAT
Locus tag: GYMC10_2317
GYMC10_2317 -71 6 ATACCCATAGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkE
Ortholog function: Putative sulfur reduction protein
Bacillus amyloliquefaciens FZB42 RBAM_005430 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0798 -32 5.4 ATACCCCTATAGGTAA
Bacillus licheniformis DSM 13 BLi02794 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0190 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26540 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2069 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2652 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -56
Score: 5.9
Sequence: ATACCCCTAAGGGTAT
Locus tag: GYMC10_2320
GYMC10_2320 -56 5.9 ATACCCCTAAGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrkF
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2347 -68 5 ATACTCATAGAGGTAA
-22 5.5 ATACCCTTATGAGTAT
Bacillus amyloliquefaciens FZB42 RBAM_005450 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0793 -29 5.8 ATACCCCTACAGGTAT
Bacillus licheniformis DSM 13 BLi02793 -93 5.5 ATACCCTTTAGGGTAT
-44 5.9 ATACCTGTACGGGTAT
Bacillus pumilus SAFR-032 BPUM_0192 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Bacillus subtilis subsp. subtilis str. 168 BSU26530 -101 4.6 ATACCCCCTATGGTAT
-34 5.2 ATACCCGCAGGGGTAA
Geobacillus kaustophilus HTA426 GK2066 -69 5.5 ATACCCATATATGTAT
Oceanobacillus iheyensis HTE831 OB2651 -116 5.9 ATACCTGTACGGGTAT
-45 5.4 ATACCTATGCGGGTAT
Position: -94
Score: 5.3
Sequence: ATACCCGTAGGGGTAG
Locus tag: GYMC10_2489
GYMC10_2489 -94 5.3 ATACCCGTAGGGGTAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: Aflv_2282
Ortholog function: Rhodanese-like domain protein
Anoxybacillus flavithermus WK1 Aflv_2282 -31 5.4 ATACCCATATACGTAT
Bacillus amyloliquefaciens FZB42 RBAM_005440 -104 5.7 ATACCCCTACCGGTAT
-40 5.2 ATACCCCCAGGGGTAA
Bacillus cereus ATCC 14579 BC0796 -20 5 ATACCTATGGGGGTAA
Bacillus pumilus SAFR-032 BPUM_0191 -75 5.6 ATACCCTTACCGGTAT
-35 5 ATACCCCCATAGGTAA
Geobacillus kaustophilus HTA426 GK2068 -69 5.5 ATACCCATATATGTAT
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