Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YdfF regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: YdfF - Bacillales
Regulator type: Transcription factor
Regulator family: ArsR
Regulation mode: repressor
Biological process:
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) GYMC10_2628
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -70
Score: 5.7
Sequence: TTCGATGAGCATCGAA
Locus tag: GYMC10_2627
GYMC10_2627 -70 5.7 TTCGATGAGCATCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydfE
Ortholog function: Putative flavoprotein
Bacillus clausii KSM-K16 ABC1173 -68 5.8 TTCGATTATAATGGAA
Bacillus halodurans C-125 BH0392 -66 5.7 TTCGATGATAGTTGAA
Bacillus licheniformis DSM 13 BLi03717 -59 5.6 TTCGATGTTAATTGAA
Bacillus subtilis subsp. subtilis str. 168 BSU05380 -66 5.7 TTCGATGATAGTTGAA
Position: -43
Score: 5.7
Sequence: TTCGATGCTCATCGAA
Locus tag: GYMC10_2628
GYMC10_2628 -43 5.7 TTCGATGCTCATCGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydfF
Ortholog function: Transcriptional regulator, ArsR family
Bacillus clausii KSM-K16 ABC1174 -43 5.8 TTCCATTATAATCGAA
Bacillus halodurans C-125 BH0391 -41 5.7 TTCAACTATCATCGAA
Bacillus licheniformis DSM 13 BLi03718 -45 5.6 TTCAATTAACATCGAA
Bacillus subtilis subsp. subtilis str. 168 BSU05390 -39 5.7 TTCAACTATCATCGAA
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