Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TyrR regulog to Shigella dysenteriae 1012

Reference regulog properties
Source regulog: TyrR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: TyrR
Regulation mode: activator (repressor)
Biological process: Aromatic amino acid metabolism
Effector: Tyrosine; Phenylalanine
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Shigella dysenteriae 1012
Orthologous TF(s) Sdys1_01002800, Sdys1_01002271
Regulated genes 5
Built upon 106 sites [see more]
Predicted regulatory interactions in Shigella dysenteriae 1012
Locus tag Position Score Sequence
Position: -239
Score: 5.6
Sequence: ATGTAATTTATTATTTACAC
Position: -163
Score: 5
Sequence: GTGGAATTTTTTCTTTACAA
Locus tag: Sdys1_01001310
Sdys1_01001310 -239 5.6 ATGTAATTTATTATTTACAC
-163 5 GTGGAATTTTTTCTTTACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroL
Ortholog function: Shikimate kinase III (EC 2.7.1.71)
Escherichia coli str. K-12 substr. MG1655 b0388 -182 5.6 ATGTAATTTATTATTTACAC
-106 5 GTGGAATTTTTTCTTTACAA
Salmonella typhimurium LT2 STM0388 -181 5.4 ATGTAATGAAAAATTTACAG
-107 5.8 GTGTAAATTATTATTTACAT
Citrobacter koseri ATCC BAA-895 CKO_02783 -238 5.4 ATGTAATGTTATTTTTACAC
-163 5 GTGGAATGATTTATTTACAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00332 -165 4.6 ATGCAATGATAAGTTTACAT
-101 5.3 GTGTAATTTTTTCTTTACGT
Enterobacter sp. 638 Ent638_0859 -182 4.5 ATGCAATGATTTCTTTACAG
-108 4.9 CTGTAATCCAATTTTTACAA
Erwinia amylovora ATCC 49946 EAM_0932 -126 4.5 CTGTAAATAAAACGTTACTG
Yersinia pestis KIM y0972 -174 5 GTGTATTATTAATTTTACGT
Serratia proteamaculans 568 Spro_1018 -122 4.9 TCGTAAATATTGAAATACAG
Proteus mirabilis HI4320 PMI0371 -57 5.5 TTGTAAATTTTAGATTACAC
Position: -89
Score: 5
Sequence: ATGTAAACAAATTAATACAA
Locus tag: Sdys1_01001993
Sdys1_01001993 -89 5 ATGTAAACAAATTAATACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aroP
Ortholog function: Aromatic amino acid transport protein AroP
Escherichia coli str. K-12 substr. MG1655 b0112 -89 5 ATGTAAACAAATTAATACAA
Salmonella typhimurium LT2 STM0150 -108 5.2 TTGTAAATAAATCAATACAA
Citrobacter koseri ATCC BAA-895 CKO_03262 -87 5 GcGTAAAcaTAttaaTACAa
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00116 -192 4.8 CCGTAAACAAAACAATACAG
Enterobacter sp. 638 Ent638_0658 -87 4.4 CCGTAACGAAATAAATACAT
-64 4.5 ATGGAATTTCATAATTACAC
Erwinia amylovora ATCC 49946 EAM_0745 -187 4.4 GCGTAAAGTTTCCAATACAC
Yersinia pestis KIM y0765 -234 5.3 GTGTAATTAAATGATTACAT
Serratia proteamaculans 568 Spro_4013 -80 4.4 CCGTAAATAAAACAAAACAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3791 -93 5.4 CCGTAAAAATAAAATTACAC
Edwardsiella tarda EIB202 ETAE_0657 -91 5.4 ATGTAAAAATAAAATTACGA
Position: -89
Score: 3.7
Sequence: GTGTCAATGATTGTTGACAG
Locus tag: Sdys1_01002271
Sdys1_01002271 -89 3.7 GTGTCAATGATTGTTGACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tyrR
Ortholog function: Transcriptional regulator of aromatic amino acid biosynthesis
Escherichia coli str. K-12 substr. MG1655 b1323 -89 3.7 GTGTCAATGATTGTTGACAG
Salmonella typhimurium LT2 STM1683 -89 4.2 CTGTCAATATTTGTTGACAG
Citrobacter koseri ATCC BAA-895 CKO_01393 -90 4.2 CTGTCAATAATTGTTGACAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01305 -90 4.2 CTGTCAATAATTGTTGACAG
Enterobacter sp. 638 Ent638_2152 -86 3.7 CTGTCAATATCTGTTGACAG
Erwinia amylovora ATCC 49946 EAM_1834 -96 3.9 CTGTCAACTTTTCATGACAG
Serratia proteamaculans 568 Spro_2617 -98 3.6 CTGTCAACTTTTGCTGACAG
Proteus mirabilis HI4320 PMI1369 -96 3.7 GTGTCAACTTTTGCTGACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2580 -178 3.7 TTTTATAATCAATCTTACAA
Position: -74
Score: 5
Sequence: CCGTAAATTTTTATTGACAG
Locus tag: Sdys1_01002593
Sdys1_01002593 -74 5 CCGTAAATTTTTATTGACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompF
Ortholog function: outer membrane porin F
Escherichia coli str. K-12 substr. MG1655 b0929 -75 5 CCGTAAATTTTTATTGACAG
Citrobacter koseri ATCC BAA-895 CKO_02137 -76 5 ccGTAAATTTttATTgACAg
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