Propagation of DeoR regulog to Yersinia intermedia ATCC 29909
| Source regulog: | DeoR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleoside utilization |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Yersinia intermedia ATCC 29909 |
| Orthologous TF(s) | YintA_01003342 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -24
Score: 4.2 Sequence: TGTTAGCAAAAACAGA
Locus tag: YintA_01002995
|
||||
| YintA_01002995 | -24 | 4.2 | TGTTAGCAAAAACAGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoB | ||||
| Ortholog function: phosphopentomutase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4383 | -60 | 6 | TGTTAGAATACTAACA |
| Salmonella typhimurium LT2 | STM4569 | -44 | 5.6 | TGTTAGAATATTAACA |
| Citrobacter koseri ATCC BAA-895 | CKO_03408 | -45 | 6 | TGTTAGAATACTAACA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04839 | -246 | 5.7 | TGTTAGAATTATCACA |
| -69 | 5.4 | TGTTACAATAGTAACA | ||
| Enterobacter sp. 638 | Ent638_0543 | -62 | 5.9 | TGTTAGAATACTCACA |
| Erwinia amylovora ATCC 49946 | EAM_0617 | -230 | 4.9 | TGTGATAATTCTAACA |
| -78 | 5.7 | TGTTATAATCCTCACA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0729 | -185 | 5.4 | TGTTGAAATAATCACA |
| Edwardsiella tarda EIB202 | ETAE_0488 | -104 | 5.3 | TGTTCAAATAATCACA |
| Proteus mirabilis HI4320 | PMI2414 | -302 | 4.3 | TGTGATTCTGATCACA |
| -259 | 4 | TTTTATTATTGTGACA | ||
|
Position: -54
Score: 5.3 Sequence: TGTTACTATTATAACA
Locus tag: YintA_01003341
|
||||
| YintA_01003341 | -54 | 5.3 | TGTTACTATTATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC2 | ||||
| Ortholog function: deoxyribose-phosphate aldolase | ||||
| Yersinia pestis KIM | y2860 | -105 | 4.3 | TGTAATTTAAATAACA |
| -44 | 5.3 | TGTTATGATTATCACA | ||
| Serratia proteamaculans 568 | Spro_1632 | -165 | 4.8 | TGTTACTTAAATAACA |
| -59 | 5.5 | TGTTATTATTCTAACA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2684 | -109 | 5.5 | TGTTATTAAAATAACA |
| -79 | 4.3 | TGTTATTTTTGTGACA | ||
| Proteus mirabilis HI4320 | PMI3512 | -146 | 5.4 | TGTTAGAATAGTTACA |
| -105 | 4.5 | TGTTATTTAAATATCA | ||
| -54 | 4.8 | TGTTGCCAAACTAACA | ||