Propagation of TnrA regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog:	TnrA - Bacillales
Regulator type:	Transcription factor
Regulator family:	MerR
Regulation mode:	repressor (activator)
Biological process:	Nitrogen assimilation
Effector:	NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum:	Firmicutes
Propagated regulon:
Target genome	Geobacillus sp. Y412MC10
Orthologous TF(s)	GYMC10_0702
Regulated genes	13

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Predicted regulatory interactions in *Geobacillus sp. Y412MC10*
	Locus tag	Position	Score	Sequence
Position: -199 Score: 5 Sequence: TGTTAGAATTCCTCACA Position: -126 Score: 4.6 Sequence: TGTCATAAATCCTTCCA Locus tag: GYMC10_0702
	GYMC10_0702	-199	5	TGTTAGAATTCCTCACA
		-126	4.6	TGTCATAAATCCTTCCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168	BSU13310	-124	3.9	TGTTAATTTTTCTTCCG
		-81	5.5	TGTTAGAAAATATGACA
Bacillus amyloliquefaciens FZB42	RBAM_013130	-124	4.1	TGTCAATTTTTCTGCCG
		-81	4.8	CGTCAGAAAACCTGACA
Bacillus pumilus SAFR-032	BPUM_1230	-121	4	TGTCAACTTTCCTTCCA
		-80	5.5	TGTTATATTTTCTAACA
Bacillus licheniformis DSM 13	BLi01490	-124	3.8	TGTAAACTTTTCTTCCG
		-81	5.6	TGTTAGATTTTCTGACA
Anoxybacillus flavithermus WK1	Aflv_1544	-113	4.9	TGTTACTTTTTATAACA
		-82	4.9	TGTTACTTTTTATAACA
		-27	5.4	TGTTATAAAATATGACA
Geobacillus kaustophilus HTA426	GK1860	-86	3.9	TGTTAATTTTATTTACA
		-33	4.6	CGTTAGAAAATATAACG
Bacillus halodurans C-125	BH1494	-110	5.5	TGTAAGAAAATCTAACA
Bacillus clausii KSM-K16	ABC1760	-99	5.5	TGTTAGATTTTCTTACA
		-57	5	TGTGATATATTGTTACA
Oceanobacillus iheyensis HTE831	OB1650	-80	5.1	TGTTAGAAATACTAACA
		-57	4.3	TGACATATAAGCTGACG
Paenibacillus sp. JDR-2	Pjdr2_5154	-302	5.7	TGTTAGATAATCTAACA
		-41	5	TGTTAGAAAACATTACA

Position: -186 Score: 5.1 Sequence: TGTTATTTTATATAACA Position: -112 Score: 4.7 Sequence: TGTAAGAATTATTGACA Locus tag: GYMC10_1633
	GYMC10_1633	-186	5.1	TGTTATTTTATATAACA
		-112	4.7	TGTAAGAATTATTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: urtA
Ortholog function: Urea ABC transporter, urea binding protein
Geobacillus kaustophilus HTA426	GK1937	-224	4.3	TGATAATAAATATAACA
		-201	5.2	TGTAATAAAATGTGACA
Bacillus halodurans C-125	BH0251	-192	4.5	TGTTATCTTTGATGACA
		-157	5	TGTTAGAAAAGATTACA
		-88	4.4	TGTAACGATTTCTAACG
Paenibacillus sp. JDR-2	Pjdr2_0557	-286	4.2	TCTTATATTTTCTTTCA
		-113	3.9	TGTCATGTATATTGACG

Position: -279 Score: 4.6 Sequence: TGTCAATATATGTGACA Locus tag: GYMC10_2505
	GYMC10_2505	-279	4.6	TGTCAATATATGTGACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasA
Ortholog function: Nitrate/nitrite transporter
Bacillus subtilis subsp. subtilis str. 168	BSU03330	-98	4.9	TGTCACAAAAACTTACA
Bacillus amyloliquefaciens FZB42	RBAM_003540	-97	4.8	TGTCGCATTATCTTACA
Bacillus licheniformis DSM 13	BLi00365	-87	4.7	TGTTAGTAAAGCTTACA
Bacillus clausii KSM-K16	ABC1625	-89	5.2	TGTCACAAAATATTACA

Position: -238 Score: 4.2 Sequence: TGTCAATATACATTACA Position: -176 Score: 4.6 Sequence: TGTCACATATATTGACA Position: -49 Score: 4.2 Sequence: TTTCGTATTTTCTTACA Locus tag: GYMC10_2506
	GYMC10_2506	-238	4.2	TGTCAATATACATTACA
		-176	4.6	TGTCACATATATTGACA
		-49	4.2	TTTCGTATTTTCTTACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nasB
Ortholog function: Nitrite reductase [NAD(P)H] large subunit (EC 1.7.1.4)
Bacillus subtilis subsp. subtilis str. 168	BSU03320	-98	4.9	TGTAAGTTTTTGTGACA
Bacillus amyloliquefaciens FZB42	RBAM_003530	-100	4.8	TGTAAGATAATGCGACA
Bacillus licheniformis DSM 13	BLi00482	-87	5	TGTCAGGAAATGTAACA
Bacillus clausii KSM-K16	ABC1623	-89	5.2	TGTCACAAAATATTACA
Paenibacillus sp. JDR-2	Pjdr2_2175	-223	4	TGTCAATAAACTTAACA
		-159	4	TGTGACCTATATTGACA

Position: -130 Score: 5.5 Sequence: TGTTAGATTATATTACA Position: -35 Score: 4.7 Sequence: TGTTATATTAGTTAACA Locus tag: GYMC10_4598
	GYMC10_4598	-130	5.5	TGTTAGATTATATTACA
		-35	4.7	TGTTATATTAGTTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrgA
Ortholog function: Ammonium transporter
Anoxybacillus flavithermus WK1	Aflv_1332	-112	4.6	TGTCATGAAAAATAACA
		-49	4.8	TGTAATATATTATAACC
		-27	5	TGTTATAAAAAATGACA
Geobacillus kaustophilus HTA426	GK1452	-124	4.4	TGTTAAGAAATTTAACA
		-48	5.4	TGTTATATATTATGACA
Bacillus halodurans C-125	BH3834	-138	4	TGTCAGATATAGGCACA
		-113	4.9	TGTCTGATTATCTGACA
		-41	4.3	TATTAGAAAAACTTACA
Bacillus clausii KSM-K16	ABC3928	-84	5.2	TGTTAGATATCCTGACA
Paenibacillus sp. JDR-2	Pjdr2_2141	-159	4.2	TGTGAAAAAACTTAACA
		-34	4.5	TGTTAGTAAACATCACA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of TnrA regulog to Geobacillus sp. Y412MC10

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --