Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of IdnR regulog to Escherichia coli HS

Reference regulog properties
Source regulog: IdnR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: activator (repressor)
Biological process: Idonate utilization
Effector: L-idonate; 5-dehydro-D-gluconate
Phylum: Proteobacteria/Gamma
Propagated regulon:
Target genome Escherichia coli HS
Orthologous TF(s) EcHS_A4520
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Escherichia coli HS
Locus tag Position Score Sequence
Position: -117
Score: 5.9
Sequence: TCACGTTATGCGTAACATAG
Locus tag: EcHS_A4523
EcHS_A4523 -117 5.9 TCACGTTATGCGTAACATAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnD
Ortholog function: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Escherichia coli str. K-12 substr. MG1655 b4267 -117 5.9 TCACGTTATGCGTAACATAG
Salmonella typhimurium LT2 STM4484 -117 5.9 TCACGTTATGCGTAACATTG
Serratia proteamaculans 568 Spro_3287 -121 5.1 TCACGTTAAAGGTAACAGCT
Position: -119
Score: 5.9
Sequence: CTATGTTACGCATAACGTGA
Locus tag: EcHS_A4524
EcHS_A4524 -119 5.9 CTATGTTACGCATAACGTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: idnK
Ortholog function: Gluconokinase (EC 2.7.1.12)
Escherichia coli str. K-12 substr. MG1655 b4268 -119 5.9 CTATGTTACGCATAACGTGA
Salmonella typhimurium LT2 STM4485 -119 5.9 CAATGTTACGCATAACGTGA