Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing idnD gene

Properties
Regulog: IdnR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: activator (repressor)
Biological process: Idonate utilization
Effector: L-idonate; 5-dehydro-D-gluconate
Phylum: Proteobacteria/Gamma
Built upon 7 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Escherichia coli str. K-12 substr. MG1655
Position: -117
Score: 5.87062
Sequence: TCACGTTATGCGTAACATAG
Locus tag: b4267
Name: idnD
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: b4266
Name: idnO
Funciton: 5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
Locus tag: b4265
Name: idnT
Funciton: L-idonate, D-gluconate, 5-keto-D-gluconate transporter
Locus tag: b4264
Name: idnR
Funciton: Positive regulator of L-idonate catabolism
idnD-idnO-idnT-idnR -117 5.9 TCACGTTATGCGTAACATAG b4267
Salmonella typhimurium LT2
Position: -117
Score: 5.93303
Sequence: TCACGTTATGCGTAACATTG
Locus tag: STM4484
Name: idnD
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
Locus tag: STM4483
Name: idnO
Funciton: 5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
Locus tag: STM4482
Name: idnT
Funciton: L-idonate, D-gluconate, 5-keto-D-gluconate transporter
Locus tag: STM4481
Name: idnR
Funciton: Positive regulator of L-idonate catabolism
idnD-idnO-idnT-idnR -117 5.9 TCACGTTATGCGTAACATTG STM4484
Serratia proteamaculans 568
Position: -121
Score: 5.08153
Sequence: TCACGTTAAAGGTAACAGCT
Locus tag: Spro_3288
Name: idnO
Funciton: 5-keto-D-gluconate 5-reductase (EC 1.1.1.69)
Locus tag: Spro_3287
Name: idnD
Funciton: L-idonate 5-dehydrogenase (EC 1.1.1.264)
idnO-idnD -121 5.1 TCACGTTAAAGGTAACAGCT Spro_3288