Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CymR regulog to Geobacillus sp. Y412MC10

Reference regulog properties
Source regulog: CymR - Bacillales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: repressor
Biological process: Cysteine metabolism
Effector: O-acetyl-L-serine; CysK, cysteine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Geobacillus sp. Y412MC10
Orthologous TF(s) GYMC10_1589
Regulated genes 6
Built upon 65 sites [see more]
Predicted regulatory interactions in Geobacillus sp. Y412MC10
Locus tag Position Score Sequence
Position: -183
Score: 4.7
Sequence: AAAAACCTACCTTTTTACTCGGATATT
Locus tag: GYMC10_0062
GYMC10_0062 -183 4.7 AAAAACCTACCTTTTTACTCGGATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysK
Ortholog function: Cysteine synthase (EC 2.5.1.47)
Bacillus subtilis subsp. subtilis str. 168 BSU00730 -39 5.4 TAATACCAATACAAATAGTCGGAAATT
Bacillus amyloliquefaciens FZB42 RBAM_000840 -39 5.8 TAATACCAATAAATTTAGTCGGAAATT
Bacillus pumilus SAFR-032 BPUM_0057 -40 4.6 TtAaTaCaATaAAATTAcTcGGAgaTA
Bacillus licheniformis DSM 13 BLi00089 -38 5.6 TAATCCCAATAAAATTACTCGGAAATT
Anoxybacillus flavithermus WK1 Aflv_0065 -30 5 CAAATTCTATAAAAATACTCGGGATTA
Geobacillus kaustophilus HTA426 GK0065 -38 4.7 CAAAGTCGATAAAATTAATGGGGATTA
Bacillus cereus ATCC 14579 BC0075 -39 5.3 TAAAACCAATAAAAATACTCGGTGTTA
Bacillus halodurans C-125 BH0088 -39 5.2 GAAAACCAATAAATTTACTTGGGATTA
Bacillus clausii KSM-K16 ABC0109 -42 4.9 TAAAACCAATGAAGATACTAGGGATTG
Oceanobacillus iheyensis HTE831 OB0084 -41 6 TAAATCTTATAAAAATACTTGGAATTA
Paenibacillus sp. JDR-2 Pjdr2_0074 -44 5.7 AAAAACCAACTAAATTAGTCGGAATAA
Position: -181
Score: 4.8
Sequence: CATAACATACTAAACGGGTAGGAATTA
Locus tag: GYMC10_0641
GYMC10_0641 -181 4.8 CATAACATACTAAACGGGTAGGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: subI
Ortholog function: Sulfate ABC transporter (sulfate-binding protein)
Bacillus cereus ATCC 14579 BC1090 -158 5.4 AAATTCCAAGTTGACACATATGAATTA
Bacillus cereus ATCC 14579 BC1091 -158 5.4 AAATTCCAAGTTGACACATATGAATTA
Bacillus halodurans C-125 BH3127 -142 4.8 TAAAACCCACTTGACAGATGGGGATTA
-50 4.6 TAAAACAGACTTTTCCGATCTGTTTTA
Paenibacillus sp. JDR-2 Pjdr2_4823 -96 4.7 CATAACCAACTAAACAGGTAGGAATAA
Position: -118
Score: 4.7
Sequence: TAATTCATACTATATAGGTTGGAAAAG
Locus tag: GYMC10_0644
GYMC10_0644 -118 4.7 TAATTCATACTATATAGGTTGGAAAAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3126
Ortholog function: Hypothetical protein
Bacillus halodurans C-125 BH3126 -142 4.8 TAAAACCCACTTGACAGATGGGGATTA
-50 4.6 TAAAACAGACTTTTCCGATCTGTTTTA
Paenibacillus sp. JDR-2 Pjdr2_4820 -96 4.7 CATAACCAACTAAACAGGTAGGAATAA
Position: -68
Score: 6.1
Sequence: TAATTCTTACTAAAACTATAGGAATTA
Locus tag: GYMC10_3098
GYMC10_3098 -68 6.1 TAATTCTTACTAAAACTATAGGAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_5232
Ortholog function: Extracellular solute-binding protein family 3
Paenibacillus sp. JDR-2 Pjdr2_5232 -55 6.1 TAATTCTTAGTAAGTTTATAGGAATTA
Position: -60
Score: 5.7
Sequence: TAATTCATATTATTTCAGTAGGATTAT
Locus tag: GYMC10_5713
GYMC10_5713 -60 5.7 TAATTCATATTATTTCAGTAGGATTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cysH
Ortholog function: Phosphoadenylyl-sulfate reductase (EC 1.8.4.8)
Bacillus amyloliquefaciens FZB42 RBAM_015400 -299 4.7 TTATTCCTATCAAAAAACTCGGGTTGA
Anoxybacillus flavithermus WK1 Aflv_0316 -100 5.1 AAATTCCGATAGAAAAACTAGGATTGA
Bacillus halodurans C-125 BH1486 -73 5.3 TAAATCATATCAAATTACATGGAATTA
Bacillus clausii KSM-K16 ABC0611 -265 4.9 AAATACCGAGTTTGTTAATCAGGATAA
Oceanobacillus iheyensis HTE831 OB1652 -98 5.4 CAATTCACATTGTATTACTATGAATTA
Paenibacillus sp. JDR-2 Pjdr2_5647 -45 5.2 AATAGCATATGAATTTACTTGGAATTA
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