Propagation of DeoR regulog to Pectobacterium carotovorum subsp. carotovorum PC1
| Source regulog: | DeoR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | DeoR |
| Regulation mode: | repressor |
| Biological process: | Deoxyribonucleoside utilization |
| Effector: | |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pectobacterium carotovorum subsp. carotovorum PC1 |
| Orthologous TF(s) | PC1_1684 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -185
Score: 5.2 Sequence: TGTTGAAATCATCACA
Locus tag: PC1_0599
|
||||
| PC1_0599 | -185 | 5.2 | TGTTGAAATCATCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: deoxyribose-phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4381 | -60 | 6 | TGTTAGAATACTAACA |
| Salmonella typhimurium LT2 | STM4567 | -44 | 5.6 | TGTTAGAATATTAACA |
| Citrobacter koseri ATCC BAA-895 | CKO_03410 | -45 | 6 | TGTTAGAATACTAACA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04837 | -246 | 5.7 | TGTTAGAATTATCACA |
| -69 | 5.4 | TGTTACAATAGTAACA | ||
| Enterobacter sp. 638 | Ent638_0541 | -62 | 5.9 | TGTTAGAATACTCACA |
| Erwinia amylovora ATCC 49946 | EAM_0615 | -230 | 4.9 | TGTGATAATTCTAACA |
| -78 | 5.7 | TGTTATAATCCTCACA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0727 | -185 | 5.4 | TGTTGAAATAATCACA |
| Edwardsiella tarda EIB202 | ETAE_0486 | -104 | 5.3 | TGTTCAAATAATCACA |
| Proteus mirabilis HI4320 | PMI2416 | -302 | 4.3 | TGTGATTCTGATCACA |
| -259 | 4 | TTTTATTATTGTGACA | ||
|
Position: -110
Score: 5.5 Sequence: TGTTATTAAAATAACA
Locus tag: PC1_1685
|
||||
| PC1_1685 | -110 | 5.5 | TGTTATTAAAATAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC2 | ||||
| Ortholog function: deoxyribose-phosphate aldolase | ||||
| Yersinia pestis KIM | y2860 | -105 | 4.3 | TGTAATTTAAATAACA |
| -44 | 5.3 | TGTTATGATTATCACA | ||
| Serratia proteamaculans 568 | Spro_1632 | -165 | 4.8 | TGTTACTTAAATAACA |
| -59 | 5.5 | TGTTATTATTCTAACA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2684 | -109 | 5.5 | TGTTATTAAAATAACA |
| -79 | 4.3 | TGTTATTTTTGTGACA | ||
| Proteus mirabilis HI4320 | PMI3512 | -146 | 5.4 | TGTTAGAATAGTTACA |
| -105 | 4.5 | TGTTATTTAAATATCA | ||
| -54 | 4.8 | TGTTGCCAAACTAACA | ||
|
Position: -183
Score: 4.7 Sequence: TGTGACAAAAATCACA
Locus tag: PC1_3573
|
||||
| PC1_3573 | -183 | 4.7 | TGTGACAAAAATCACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tsx | ||||
| Ortholog function: nucleoside-specific channel-forming protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0411 | -247 | 4.5 | TGTTACTCTGCTTACA |
| Salmonella typhimurium LT2 | STM0413 | -248 | 4.4 | TGTTGCCCTACTGACA |
| Erwinia amylovora ATCC 49946 | EAM_2589 | -215 | 4.9 | TGTGATAAAAATCACA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3796 | -169 | 4.7 | TGTGATTAAAATCACA |