Propagation of GntR regulog to Pectobacterium carotovorum subsp. carotovorum PC1
| Source regulog: | GntR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Gluconate utilization |
| Effector: | Gluconate |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Pectobacterium carotovorum subsp. carotovorum PC1 |
| Orthologous TF(s) | PC1_3944 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -101
Score: 5.9 Sequence: ACATGTTACCCGTATCATGT
Position: -87
Score: 5.5 Sequence: TCATGTTACCGGTATCAAAT
Locus tag: PC1_3942
|
||||
| PC1_3942 | -101 | 5.9 | ACATGTTACCCGTATCATGT | |
| -87 | 5.5 | TCATGTTACCGGTATCAAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntU | ||||
| Ortholog function: Low-affinity gluconate transporter | ||||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4158 | -100 | 5.5 | ACATGTTACCCGTATCATAT |
|
Position: -91
Score: 5.3 Sequence: ATTTGATACCGGTAACATGA
Locus tag: PC1_3943
|
||||
| PC1_3943 | -91 | 5.3 | ATTTGATACCGGTAACATGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntK | ||||
| Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12) | ||||
| Yersinia pestis KIM | y3876 | -91 | 5.6 | ATTTGTTACCGGTATCATGA |
| -77 | 5.5 | TCATGATACCGGTAACATGG | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4159 | -77 | 5.3 | ATATGATACGGGTAACATGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1839 | -91 | 5.4 | ACTTGTTACCGGTATCATGA |
| -77 | 5.1 | TCATGATACCGGTAACGTGA | ||