Propagation of NarP regulog to Pectobacterium carotovorum subsp. carotovorum PC1

Reference regulog properties
Source regulog:	NarP - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	LuxR
Regulation mode:	activator (repressor)
Biological process:	Nitrate and nitrite respiration
Effector:	Nitrate; Nitrite
Phylum:	Proteobacteria/gamma
Propagated regulon:
Target genome	Pectobacterium carotovorum subsp. carotovorum PC1
Orthologous TF(s)	PC1_2406
Regulated genes	16

Built upon 125 sites [see more]

Predicted regulatory interactions in *Pectobacterium carotovorum subsp. carotovorum PC1*
	Locus tag	Position	Score	Sequence
Position: -122 Score: 4.3 Sequence: TACCTCTTTATAGGTG Locus tag: PC1_1286
	PC1_1286	-122	4.3	TACCTCTTTATAGGTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2)
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1408	-122	4.3	TACCCCTTTGTAGGTG

Position: -289 Score: 4 Sequence: CACCCACAAATAGGTA Locus tag: PC1_1983
	PC1_1983	-289	4	CACCCACAAATAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Escherichia coli str. K-12 substr. MG1655	b1241	-215	4.7	TACCCAGAAGTGAGTA
Salmonella typhimurium LT2	STM1749	-216	4.6	TACTCAGAAGTGAGTA
Citrobacter koseri ATCC BAA-895	CKO_01318	-216	4.6	TACTCAGAAGTGAGTA
Yersinia pestis KIM	y2023	-260	4	TACCTAAGAATAGTTA
Serratia proteamaculans 568	Spro_2704	-252	4	TACCCAAGAGTAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2326	-289	4	CACCCACAAATAGGTA
Edwardsiella tarda EIB202	ETAE_1508	-239	4.4	TACCCAAGAATGAGTA

Position: -56 Score: 4.6 Sequence: TACCTACTTAGGGTTA Locus tag: PC1_2000
	PC1_2000	-56	4.6	TACCTACTTAGGGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: Outer membrane protein W precursor
Escherichia coli str. K-12 substr. MG1655	b1256	-55	4.5	TACTCCAATGTAGGTA
Salmonella typhimurium LT2	STM1732	-55	4.7	TACTTCATTGTGGGTA
Citrobacter koseri ATCC BAA-895	CKO_01333	-55	4.5	TACTCCATTGTAGGTA
Yersinia pestis KIM	y2044	-43	4.7	TACTCATTTGTAGGTA
Serratia proteamaculans 568	Spro_2674	-28	4.5	TACCCGTAAGTAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2303	-56	4.9	TACCTACTTAGGGGTA
Edwardsiella tarda EIB202	ETAE_1528	-52	3.7	TCACTCAATATGGTTA
Proteus mirabilis HI4320	PMI1350	-59	4.9	TACTTATTAATGGGTA
Photorhabdus luminescens subsp. laumondii TTO1	plu2478	-55	3.8	TTCTAATATATGAGTA

Position: -293 Score: 3.7 Sequence: TACCTCTAAATAGTCG Position: -194 Score: 4.3 Sequence: TAATTCTTTAGTGGTA Locus tag: PC1_2259
	PC1_2259	-293	3.7	TACCTCTAAATAGTCG
		-194	4.3	TAATTCTTTAGTGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase, alpha chain (EC 1.7.99.4)
Serratia proteamaculans 568	Spro_2883	-193	3.8	TGATACTTTAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2031	-194	4.3	TAATTCTTTAGTGGTA
Proteus mirabilis HI4320	PMI3571	-237	4.8	TACTCCAAAGGGAGTA

Position: -246 Score: 4.8 Sequence: TACCCACTAGTGAGTA Locus tag: PC1_2260
	PC1_2260	-246	4.8	TACCCACTAGTGAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2030	-246	4.8	TACCCACTAGTGAGTA
		-135	4.3	TACTCATTAAGGAGTG

Position: -216 Score: 4.2 Sequence: CACTCCTTAATGAGTA Position: -105 Score: 4.7 Sequence: TACTCACTAGTGGGTA Locus tag: PC1_2261
	PC1_2261	-216	4.2	CACTCCTTAATGAGTA
		-105	4.7	TACTCACTAGTGGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Escherichia coli str. K-12 substr. MG1655	b1222	-228	4	TTACCCATAGTGAGTA
		-118	3.8	TAACTCTTTCCGGGTA
Salmonella typhimurium LT2	STM1766	-230	4.3	TTACCCTTAATGAGTA
		-120	4.5	TAACTCGTTATAGGTA
Citrobacter koseri ATCC BAA-895	CKO_01297	-249	4.4	TGCCCCTTAGTGAGTA
		-139	4.5	TAACTCGTTATAGGTA
Serratia proteamaculans 568	Spro_2899	-138	4.7	TACTTCGTTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2029	-217	4.2	CACTCCTTAATGAGTA
		-106	4.7	TACTCACTAGTGGGTA
Proteus mirabilis HI4320	PMI3569	-73	4.5	TACTCCCTTTGGAGTA

Position: -111 Score: 4.4 Sequence: TACCTCTAAAGGGTGA Locus tag: PC1_2409
	PC1_2409	-111	4.4	TACCTCTAAAGGGTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: napF
Ortholog function: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Escherichia coli str. K-12 substr. MG1655	b2208	-129	4.6	TACCCCGATCGGGGTA
Salmonella typhimurium LT2	STM2261	-132	4.8	TACCTCTATCGGGGTA
Yersinia pestis KIM	y1442	-158	4.3	TACTCATTATTCGGTA
Serratia proteamaculans 568	Spro_3488	-322	4.7	TACCCCTTTAGGGGGA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1898	-111	4.4	TACCTCTAAAGGGTGA
Edwardsiella tarda EIB202	ETAE_1114	-156	3.9	TAACCCAAAAGAGGAA

Position: -81 Score: 4.8 Sequence: TACCTCGTAAGCGGTA Locus tag: PC1_3427
	PC1_3427	-81	4.8	TACCTCGTAAGCGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dnrN
Ortholog function: Nitric oxide-dependent regulator DnrN
Escherichia coli str. K-12 substr. MG1655	b4209	-79	3.7	TGCTACGTAAGGGTTA
Salmonella typhimurium LT2	STM4399	-78	3.9	CACCCCGAAAGAGTTA
Citrobacter koseri ATCC BAA-895	CKO_03623	-78	3.9	TGACCCGAAAGGGTTA
Yersinia pestis KIM	y0652	-108	4.4	TACCCACTTGGAGTTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3606	-81	4.8	TACCTCGTAAGCGGTA

Position: -100 Score: 4.8 Sequence: TACCCACAAAGAAGTA Locus tag: PC1_3869
	PC1_3869	-100	4.8	TACCCACAAAGAAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: Nitrite reductase large subunit (EC 1.7.1.4)
Escherichia coli str. K-12 substr. MG1655	b3365	-101	5.1	TACCCATTAAGGAGTA
Salmonella typhimurium LT2	STM3474	-101	5	TACCCATTAAGAGGTA
Citrobacter koseri ATCC BAA-895	CKO_04789	-101	5.2	TACCTCTTAAGGAGTA
Yersinia pestis KIM	y3945	-100	4.5	TACCACCTTAGAGGTA
Serratia proteamaculans 568	Spro_4595	-197	4.5	TACTCCCGAATGGGTA
		-101	4.5	TACCACATTAGAGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4079	-100	4.8	TACCCACAAAGAAGTA
Proteus mirabilis HI4320	PMI1479	-134	4.1	TACTACTTTGGTAGTA

Position: -33 Score: 4.3 Sequence: TACCTCTGAAAAGGTA Locus tag: PC1_4250
	PC1_4250	-33	4.3	TACCTCTGAAAAGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase maturation
Escherichia coli str. K-12 substr. MG1655	b3739	-31	4.6	TACCTCGAAGGGAGCA
Salmonella typhimurium LT2	STM3872	-30	4.5	TACCTCGAAGTGAGCA
Citrobacter koseri ATCC BAA-895	CKO_00079	-30	4.6	TACCTCGAAGGGAGCA
Serratia proteamaculans 568	Spro_0001	-33	4.6	TACCTCCTCAGGGGTA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4519	-33	4.3	TACCTCTGAAAAGGTA
Edwardsiella tarda EIB202	ETAE_3526	-156	4.4	TACCTCCTGGGGGGTA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of NarP regulog to Pectobacterium carotovorum subsp. carotovorum PC1

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --