Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of RocR regulog to Bacillus cereus W

Reference regulog properties
Source regulog: RocR - Bacillales
Regulator type: Transcription factor
Regulator family: Fis
Regulation mode: activator
Biological process: Arginine degradation; Ornithine degradation
Effector: Ornithine; L-citrulline
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus W
Orthologous TF(s) BcerW_010100014921
Regulated genes 2
Built upon 26 sites [see more]
Predicted regulatory interactions in Bacillus cereus W
Locus tag Position Score Sequence
Position: -87
Score: 8.3
Sequence: AGCAAAAA-(1)-ATTTTGCG
Locus tag: BcerW_010100014921
BcerW_010100014921 -87 8.3 AGCAAAAA-(1)-ATTTTGCG
Supported by regulated orthologs from reference regulons
Ortholog gene name: rocR
Ortholog function: Transcriptional activator of arginine utilization, Fis family
Bacillus subtilis subsp. subtilis str. 168 BSU40350 -82 7.9 TGCAAAAT-(1)-CTTTTGCA
Bacillus amyloliquefaciens FZB42 RBAM_037260 -59 8.7 CGCAAAAT-(1)-TTTTTGCG
Bacillus pumilus SAFR-032 BPUM_3061 -89 7.2 AGCAAAAT-(1)-TCTTTGCA
Bacillus licheniformis DSM 13 BLi00421 -22 8.7 CGCAAAAA-(0)-ATTTTGCG
Bacillus cereus ATCC 14579 BC0473 -87 8.2 AGCAAAAA-(1)-TTTTTGCG
Bacillus halodurans C-125 BH3944 -116 8 CGAAAAAT-(1)-ATTTTTCT
-73 7.3 CGAAAAAA-(1)-AATTTGCA
Bacillus clausii KSM-K16 ABC0016 -95 7.7 AGAAAAAA-(1)-TTTTTGCA
-62 8.5 CGAAAAAT-(1)-TTTTTGCG
Position: -204
Score: 8.3
Sequence: CGCAAAAT-(1)-TTTTTGCT
Locus tag: BcerW_010100014926
BcerW_010100014926 -204 8.3 CGCAAAAT-(1)-TTTTTGCT
Supported by regulated orthologs from reference regulons
Ortholog gene name: BH3941
Ortholog function: Hypothetical protein
Bacillus halodurans C-125 BH3941 -215 7.3 TGCAAATT-(1)-TTTTTTCG
-172 8 AGAAAAAT-(1)-ATTTTTCG