Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of SdaR regulog to Klebsiella variicola At-22

Reference regulog properties
Source regulog: SdaR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: SdaR
Regulation mode: activator
Biological process: Glucarate utilization; Galactarate utilization
Effector: Glycerate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Klebsiella variicola At-22
Orthologous TF(s) Kvar_4204
Regulated genes 4
Built upon 31 sites [see more]
Predicted regulatory interactions in Klebsiella variicola At-22
Locus tag Position Score Sequence
Position: -221
Score: 4.6
Sequence: TTTCAGGCATTCGCCACAAA
Locus tag: Kvar_0923
Kvar_0923 -221 4.6 TTTCAGGCATTCGCCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gudP
Ortholog function: D-glucarate permease, MFS family
Escherichia coli str. K-12 substr. MG1655 b2789 -385 4.7 TTTCAGGCAAATGCCAGTAA
Salmonella typhimurium LT2 STM2962 -376 5.5 CTTTGTGCATATGCCCGCAA
Citrobacter koseri ATCC BAA-895 CKO_04143 -388 4.9 CATCAGGCATTTGCCCTAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03132 -376 4.4 CTTTAGGCAAACGCCACAAT
-221 4.6 TTTCAGGCATTCGCCACAAA
Enterobacter sp. 638 Ent638_3242 -240 4.9 CGTTGTGCTTATGCCTCAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3577 -440 4.2 CATTATGCAATTGACCTAAG
-264 4.6 TATAGGGCAAGTGCACCAAC
Position: -71
Score: 5.7
Sequence: CTTCGGGCATATGCACAATG
Locus tag: Kvar_4204
Kvar_4204 -71 5.7 CTTCGGGCATATGCACAATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdaR
Ortholog function: Glycerate-responsive transcriptional regulator for hexarate utilization, SdaR family
Escherichia coli str. K-12 substr. MG1655 b0162 -69 5.3 CTTTAGGCATTTGCACAATG
Salmonella typhimurium LT2 STM0210 -71 5.8 TTTTGTGCATTTGCACAATG
Citrobacter koseri ATCC BAA-895 CKO_03205 -17 5.1 GTTTGTGCAGATGCACAATG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00177 -17 5.4 CTTAGTGCAAATGCACAATG
Enterobacter sp. 638 Ent638_0702 -71 5.3 CTTTGTGCATTCGCACAATG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3300 -80 4.3 CTTTGTTAATTTGCACAATG