Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GntR regulog to Klebsiella variicola At-22

Reference regulog properties
Source regulog: GntR - Enterobacteriales  
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Gluconate utilization
Effector: Gluconate
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Klebsiella variicola At-22
Orthologous TF(s) Kvar_0298
Regulated genes 4
Built upon 61 sites [see more]
Predicted regulatory interactions in Klebsiella variicola At-22
Locus tag Position Score Sequence
Position: -103
Score: 6.4
Sequence: CAATGTTACCGATAACAGTT
Locus tag: Kvar_0299
Kvar_0299 -103 6.4 CAATGTTACCGATAACAGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntK
Ortholog function: Thermoresistant gluconokinase (EC 2.7.1.12)
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03801 -58 6.4 CAATGTTACCGATAACAGTT
-45 5.6 AACAGTTACCCGTAACAATT
Position: -180
Score: 5.5
Sequence: ACATGTTACCCGTATCATCC
Locus tag: Kvar_0316
Kvar_0316 -180 5.5 ACATGTTACCCGTATCATCC
Supported by regulated orthologs from reference regulons
Ortholog gene name: gntT
Ortholog function: High-affinity H+/gluconate symporter
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03785 -180 5.5 ACATGTTACCCGTATCATCC
-36 4.9 TGACGTTACCCATAACAAAT
Position: -199
Score: 6.3
Sequence: TTATTTTACCGGTAACATGA
Locus tag: Kvar_1743
Kvar_1743 -199 6.3 TTATTTTACCGGTAACATGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: edd
Ortholog function: 6-phosphogluconate dehydratase (EC 4.2.1.12)
Escherichia coli str. K-12 substr. MG1655 b1851 -212 6.3 TTATTTTACCGGTAACATGA
Salmonella typhimurium LT2 STM1885 -212 6.1 GTATTTTACCGGTAACATGA
Citrobacter koseri ATCC BAA-895 CKO_01115 -211 6.3 TTATTTTACCGGTAACATGA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02366 -211 6.3 TTATTTTACCGGTAACATGA
-2 5.4 CAATGTTACGGGTAACAAAT
Enterobacter sp. 638 Ent638_2420 -210 6.3 TTATTTTACCGGTAACATGA
Serratia proteamaculans 568 Spro_4499 -73 6.4 CAATGTTACCGATAACATGT
-59 5.5 ACATGTTACCGGTAACAAAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1836 -359 5.9 CATTGTTACCGGTATCATTT
Proteus mirabilis HI4320 PMI2760 -111 5.1 GCTTGTTACCCGTAACAATG
-96 6.4 CAATGTTACCGGTAACAAGT