Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of AraC regulog to Dickeya dadantii Ech586

Reference regulog properties
Source regulog: AraC - Enterobacterales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator (repressor)
Biological process: Arabinose utilization
Effector: Arabinose
Phylum: Proteobacteria
Propagated regulon:
Target genome Dickeya dadantii Ech586
Orthologous TF(s) Dd586_2091
Regulated genes 3
Built upon 56 sites [see more]
Predicted regulatory interactions in Dickeya dadantii Ech586
Locus tag Position Score Sequence
Position: -177
Score: 7.6
Sequence: CAGCTGATTCGTGCATA-(4)-CAGCAAATTTAACCTGC
Position: -102
Score: 7.5
Sequence: TGACAGAAAAGTACATA-(4)-CAGCTAATGACTCCTCA
Locus tag: Dd586_2095
Dd586_2095 -177 7.6 CAGCTGATTCGTGCATA-(4)-CAGCAAATTTAACCTGC
-102 7.5 TGACAGAAAAGTACATA-(4)-CAGCTAATGACTCCTCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: araB
Ortholog function: Ribulokinase (EC 2.7.1.16)
Erwinia amylovora ATCC 49946 EAM_1697 -174 8.3 CAGCTGATTTATCCATA-(4)-CAGCAAATTTAACCTTT
-99 6.3 CGACAGAAAAATACATA-(4)-TAGCCTGCTCAACCTAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2274 -176 7.1 TGACAGGTTTGTGCATA-(4)-TAGCAAATTTAACCAAT
-101 6.4 CGACAGAAAAATACATA-(4)-TAGCTAACCACTCCTAA
Serratia proteamaculans 568 Spro_2244 -175 7.5 CAGCAGATATGTGCATA-(4)-TAGCGAATTCCGCCAAG
-100 7.1 AAGCAGAAAAGTGCATA-(4)-CAGCTAACGGCTCCTCA
Yersinia pestis KIM y2095 -189 7.8 CAGTTTATTTATCCATA-(4)-CAGCAAATTTAACCTCG
-114 7.5 AAGCAGAAAAGTGCATA-(4)-CAGCTATTGGCTCCTCA
Position: -204
Score: 7.8
Sequence: TGGCGATTTTATCCATA-(4)-CAGCGAATACGGCCTGA
Locus tag: Dd586_3196
Dd586_3196 -204 7.8 TGGCGATTTTATCCATA-(4)-CAGCGAATACGGCCTGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytfQ
Ortholog function: Galactose/arabinose ABC transport system, periplasmic binding protein YtfQ precursor
Citrobacter koseri ATCC BAA-895 CKO_03603 -189 7.5 TGACAGGAAAATCCATA-(4)-CAGCTGCTTTTTTCATA
Enterobacter sp. 638 Ent638_0412 -189 7.3 TGACAGGAAAATCCATA-(4)-TAGCCACATATTCAATG
Escherichia coli str. K-12 substr. MG1655 b4227 -188 7.8 GAGCAGGAAAATCCATA-(4)-TAGCCGCATTTTTCATA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04622 -324 7.4 TGACATGAAAATCCATA-(4)-TAGCCACATCATGAATA