Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of FadR regulog to Dickeya dadantii Ech586

Reference regulog properties
Source regulog: FadR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode: activator (repressor)
Biological process: Fatty acid degradation
Effector: Palmitoyl-CoA; Oleoyl-CoA
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Dickeya dadantii Ech586
Orthologous TF(s) Dd586_1994
Regulated genes 5
Built upon 130 sites [see more]
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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

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Predicted regulatory interactions in Dickeya dadantii Ech586
Locus tag Position Score Sequence
Position: -40
Score: 5
Sequence: ATCTGGTCATACCAGAT
Locus tag: Dd586_0200
Dd586_0200 -40 5 ATCTGGTCATACCAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fadB
Ortholog function: fatty oxidation complex, alpha subunit FadB
Escherichia coli str. K-12 substr. MG1655 b3846 -42 5.1 ATCTGGTACGACCAGAT
Salmonella typhimurium LT2 STM3983 -42 5.1 ATCTGGTACGACCAGAT
Citrobacter koseri ATCC BAA-895 CKO_00188 -42 5.1 ATCTGGTATGACCAGAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04340 -43 5.1 ATCTGGTATGACCAGAT
Enterobacter sp. 638 Ent638_3949 -43 5.1 ATCTGGTATGACCAGAT
Erwinia amylovora ATCC 49946 EAM_0213 -44 5.1 ATCTGGTATGACCAGAT
Yersinia pestis KIM y0464 -43 5 ATCTGGTCATACCAGAT
Serratia proteamaculans 568 Spro_0261 -41 5 ATCTGGTCATACCAGAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0208 -43 5 ATCTGGTCATACCAGAT
Proteus mirabilis HI4320 PMI3550 -38 5.1 ATCTGGTCATACCAGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu4402 -43 5 ATCTGGTCATACCAGAT
Position: -82
Score: 3.8
Sequence: GTCTGATCGGACTTGTT
Locus tag: Dd586_2782
Dd586_2782 -82 3.8 GTCTGATCGGACTTGTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: fabB
Ortholog function: 3-oxoacyl-(acyl carrier protein) synthase
Escherichia coli str. K-12 substr. MG1655 b2323 -83 3.3 GGCTGATCGGACTTGTT
Salmonella typhimurium LT2 STM2378 -84 3.3 GGCTGATCGGACTTGTT
Citrobacter koseri ATCC BAA-895 CKO_00462 -83 3.3 GGCTGATCGGACTTGTT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02713 -83 3.8 GTCTGATCGGACTTGTT
Enterobacter sp. 638 Ent638_2871 -82 3.3 GGCTGATCGGACTTGTT
Erwinia amylovora ATCC 49946 EAM_2336 -82 3.9 AGCTGATCGGACTTGTT
Yersinia pestis KIM y1591 -85 3.7 CGCTGATCGGACTTGTT
Serratia proteamaculans 568 Spro_3368 -84 3.7 CGCTGATCGGACTTGTT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3063 -86 3.3 GGCTGATCGGACTTGTT
Edwardsiella tarda EIB202 ETAE_2421 -126 3.7 ATCTGGTTTTACCAGCG
Proteus mirabilis HI4320 PMI1795 -89 3.3 TCCTGATCGGACTTGTT
Photorhabdus luminescens subsp. laumondii TTO1 plu3184 -96 3.3 TCCTGATCGGACTTGTT
Position: -95
Score: 4.7
Sequence: AACTGGTCTGATTTGTC
Locus tag: Dd586_2802
Dd586_2802 -95 4.7 AACTGGTCTGATTTGTC
Supported by regulated orthologs from reference regulons