Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of TnrA regulog to Bacillus cereus subsp. cytotoxis NVH 391-98

Reference regulog properties
Source regulog: TnrA - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor (activator)
Biological process: Nitrogen assimilation
Effector: NrgB, ammonium uptake protein; NrgA, ammonium uptake protein; Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus cereus subsp. cytotoxis NVH 391-98
Orthologous TF(s) No orthologous TFs found
Regulated genes 20
Built upon 304 sites [see more]
Predicted regulatory interactions in Bacillus cereus subsp. cytotoxis NVH 391-98
Locus tag Position Score Sequence
Position: -8
Score: 3.6
Sequence: TGATAAGTATGATCACA
Locus tag: Bcer98_0458
Bcer98_0458 -8 3.6 TGATAAGTATGATCACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ygaF
Ortholog function: Peroxiredoxin
Paenibacillus sp. JDR-2 Pjdr2_5899 -34 3.6 GGTTAGTAAACCTGACT
Position: 20
Score: 3.3
Sequence: TGTAAATAAATATTATG
Locus tag: Bcer98_0540
Bcer98_0540 20 3.3 TGTAAATAAATATTATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnQ
Ortholog function: Glutamine transport ATP-binding protein GlnQ (TC 3.A.1.3.2)
Bacillus subtilis subsp. subtilis str. 168 BSU27430 -28 4 GGTCAAATTTTCTGATA
Bacillus amyloliquefaciens FZB42 RBAM_024530 -123 3.5 TATCAGAAATTACGAAA
Bacillus pumilus SAFR-032 BPUM_2382 -93 3.8 TGTTAAAAATGAATACA
Bacillus clausii KSM-K16 ABC0770 -8 3.4 GGACAGCAATGATCACA
Paenibacillus sp. JDR-2 Pjdr2_2874 -63 4.7 TGTTATCTAACCTAACA
Position: -217
Score: 4
Sequence: TGCTAGTATTTCTATCA
Locus tag: Bcer98_1639
Bcer98_1639 -217 4 TGCTAGTATTTCTATCA
Supported by regulated orthologs from reference regulons
Ortholog gene name: thyB
Ortholog function: Thymidylate synthase (EC 2.1.1.45)
Anoxybacillus flavithermus WK1 Aflv_1455 -43 5 TGTCATAATAAATGACA
Oceanobacillus iheyensis HTE831 OB1740 -98 4 TTTACGATTATGTAACA
Paenibacillus sp. JDR-2 Pjdr2_2655 -11 4.5 TGATATAAAAAGTGACA
Position: -84
Score: 5.1
Sequence: TGTAAGAAAAGCTAACA
Locus tag: Bcer98_2382
Bcer98_2382 -84 5.1 TGTAAGAAAAGCTAACA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glnR
Ortholog function: Transcriptional regulator of nitrogen excess response, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU17450 -82 4.3 TGTTAAGAATCCTTACA
-59 5 TGACACATAATATAACA
Bacillus amyloliquefaciens FZB42 RBAM_017250 -82 4.3 TGTTAAGATTCCTTACA
-59 4.9 TGACACAAAATATAACA
Bacillus pumilus SAFR-032 BPUM_1636 -82 4.4 TGTTAATATTCCTAACA
-59 5.1 TGACATATAATATAACA
-54 4.2 TATAATATAACATGACA
Bacillus licheniformis DSM 13 BLi01992 -81 4.2 TGTAAAGAATCCTTACA
-58 5 TGACACATTATATAACA
Anoxybacillus flavithermus WK1 Aflv_1508 -82 4.7 TGTGATAAAATGTAACG
-59 4.3 TGACATATAAGTTAACA
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