Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fnr regulog to Enterobacter sp. 638

Reference regulog properties
Source regulog: Fnr - Enterobacteriales
Regulator type: Transcription factor
Regulator family: CRP
Regulation mode: activator (repressor)
Biological process: Energy metabolism; Anaerobic metabolism
Effector: Oxygen
Phylum: Gammaproteobacteria
Propagated regulon:
Target genome Enterobacter sp. 638
Orthologous TF(s) Ent638_1853
Regulated genes 74
Built upon 685 sites [see more]
Predicted regulatory interactions in Enterobacter sp. 638
Locus tag Position Score Sequence
Position: -111
Score: 4
Sequence: TTGATTTTAGAAAA
Locus tag: Ent638_0218
Ent638_0218 -111 4 TTGATTTTAGAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceB
Ortholog function: Malate synthase (EC 2.3.3.9)
Citrobacter koseri ATCC BAA-895 CKO_03906 -162 4.2 TTTATTGTTATCAA
Enterobacter sp. 638 Ent638_0218 -111 4 TTGATTTTAGAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04395 -154 4.1 TTCATTGTTATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4396 -61 4
Proteus mirabilis HI4320 PMI2764 -64 4.2
Position: -25
Score: 3.8
Sequence: TTGTTAATAAGCAA
Locus tag: Ent638_0325
Ent638_0325 -25 3.8 TTGTTAATAAGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuA
Ortholog function: C4-dicarboxylate transporter DcuA
Citrobacter koseri ATCC BAA-895 CKO_03697 -25 4.4 TTGTTAAACAACAA
Citrobacter koseri ATCC BAA-895 CKO_03697 -25 4.4 TTGTTAAACAACAA
Enterobacter sp. 638 Ent638_0325 -25 3.8 TTGTTAATAAGCAA
Enterobacter sp. 638 Ent638_0325 -25 3.8 TTGTTAATAAGCAA
Erwinia amylovora ATCC 49946 EAM_0415 -194 4 TTGATATAACACGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0620 -288 4 TTGTTCTAAAATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04528 -25 4.5 TTGTTAAAAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04528 -25 4.5 TTGTTAAAAAACAA
Salmonella typhimurium LT2 STM4325 -25 4.4 TTGTTAAACAACAA
Salmonella typhimurium LT2 STM4325 -25 4.4 TTGTTAAACAACAA
Position: -184
Score: 3.5
Sequence: TTAATAATTATCAT
Position: 0
Score: 3.5
Sequence: ATGTTAAACAACAT
Locus tag: Ent638_0326
Ent638_0326 -184 3.5 TTAATAATTATCAT
0 3.5 ATGTTAAACAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: aspA
Ortholog function: Aspartate ammonia-lyase (EC 4.3.1.1)
Edwardsiella tarda EIB202 ETAE_0311 19 3.5 TTGAAGAAGATCTA
Enterobacter sp. 638 Ent638_0326 -184 3.6 TTAATAATTATCAT
Erwinia amylovora ATCC 49946 EAM_0416 -194 4 TTGATATAACACGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0621 -288 4 TTGTTCTAAAATAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04529 0 3.5 ATGTTAAACAACAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4137 -362 4.2 TTGATTTGGATGAA
-198 3.8 ATCACATATATCAA
Proteus mirabilis HI4320 PMI2546 -202 3.7 ATGAGATAGATCAC
Position: -31
Score: 3.6
Sequence: TTGCGGAATAACAA
Locus tag: Ent638_0343
Ent638_0343 -31 3.6 TTGCGGAATAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frdA
Ortholog function: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Citrobacter koseri ATCC BAA-895 CKO_03678 -151 4 TTAATCAGAATCAA
Enterobacter sp. 638 Ent638_0343 -31 3.6 TTGCGGAATAACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4124 -239 4.1
Proteus mirabilis HI4320 PMI3588 -208 4
Salmonella typhimurium LT2 STM4343 -191 4.4 TTAATCAAAATCAA
Serratia proteamaculans 568 Spro_0419 -63 3.7 TTTATAAATATTAA
Position: -244
Score: 4.6
Sequence: TTGTTCTGAATCAA
Position: -213
Score: 4.2
Sequence: TTGATGCAAATCAC
Locus tag: Ent638_0437
Ent638_0437 -244 4.6 TTGTTCTGAATCAA
-213 4.2 TTGATGCAAATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdD
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2)
Citrobacter koseri ATCC BAA-895 CKO_03580 -235 4.2 TTGATGCAAATCAC
Edwardsiella tarda EIB202 ETAE_0423 -196 4.7 TTGATTCAGGTCAA
Enterobacter sp. 638 Ent638_0437 -244 4.7 TTGTTCTGAATCAA
-213 4.2 TTGATGCAAATCAC
Erwinia amylovora ATCC 49946 EAM_3059 -106 4.2 TTGCTTCAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0375 -182 4.8 TTGCTCTACATCAA
Escherichia coli str. K-12 substr. MG1655 b4238 -249 4.8 TTGAGCTACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04646 -248 4.2 TTGTTCTGGGTCAA
-217 4.2 TTGATGCAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu4499 -160 4.7 TTGTTTCAGATCAA
Proteus mirabilis HI4320 PMI3451 -184 4.9 TTGATTTAGATCAG
Salmonella typhimurium LT2 STM4452 -249 5 TTGTTCTACATCAA
-218 4.2 TTGATGCAAATCAC
Serratia proteamaculans 568 Spro_0525 -217 4.7 TTGTTCTACGTCAA
Yersinia pestis KIM y0733 -192 4.6 TTGTTCTAGGTCAA
Position: -291
Score: 5
Sequence: TTGATATATGTCAA
Locus tag: Ent638_0562
Ent638_0562 -291 5 TTGATATATGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: Aerobic respiration control protein arcA
Citrobacter koseri ATCC BAA-895 CKO_03387 -291 5.1 TTGATATATGTCAA
Edwardsiella tarda EIB202 ETAE_0561 -300 5.1 TTGATATATGTCAA
Enterobacter sp. 638 Ent638_0562 -291 5.1 TTGATATATGTCAA
Erwinia amylovora ATCC 49946 EAM_0640 -399 4.5 TTGATGCAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3893 -339 5.1 TTGATATATGTCAA
Escherichia coli str. K-12 substr. MG1655 b4401 -291 5.1 TTGATATATGTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04856 -291 5.1 TTGATATATGTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0562 -282 4.9 TTGATGTACGTCAA
Proteus mirabilis HI4320 PMI3719 -343 4 ATTACATAAATCAA
-282 4.6 TTGATATGTGTCAA
Salmonella typhimurium LT2 STM4598 -291 5.1 TTGATATATGTCAA
Serratia proteamaculans 568 Spro_0681 -299 5.1 TTGATATATGTCAA
Yersinia pestis KIM y3721 -298 5.1 TTGATATATGTCAA
Position: -116
Score: 4.7
Sequence: CTGATTTCAATCAA
Locus tag: Ent638_0659
Ent638_0659 -116 4.7 CTGATTTCAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pdhR
Ortholog function: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family
Citrobacter koseri ATCC BAA-895 CKO_03260 -116 4.7 CTGATTTCAATCAA
Edwardsiella tarda EIB202 ETAE_0658 -165 4.5 TTGATTGTTAACAA
-139 5 ATGATTTACATCAA
Enterobacter sp. 638 Ent638_0659 -116 4.7 CTGATTTCAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3790 -116 4.2 GTGATTTAGCTCAA
Escherichia coli str. K-12 substr. MG1655 b0113 -115 4.8 ATGATTTCAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00117 -114 4.7 CTGATTTCAATCAA
Proteus mirabilis HI4320 PMI2047 -245 4 ATGTGTTTAATCAA
-134 4.2 ATGATTTCGCTCAA
Salmonella typhimurium LT2 STM0151 -116 4.7 CTGATTTCAATCAA
Serratia proteamaculans 568 Spro_4012 -117 4.6 CTGATTTCGATCAA
Yersinia pestis KIM y0766 -135 4.4 ATGATTTCGGTCAA
Position: -102
Score: 4.4
Sequence: TTGATTTTAGTCAT
Locus tag: Ent638_1152
Ent638_1152 -102 4.4 TTGATTTTAGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuC
Ortholog function: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1)
Citrobacter koseri ATCC BAA-895 CKO_02537 -106 4.7 TTGATTTTAATCAG
Edwardsiella tarda EIB202 ETAE_1192 -147 4.1 TTGACCAATATCAG
Enterobacter sp. 638 Ent638_1152 -102 4.4 TTGATTTTAGTCAT
Escherichia coli str. K-12 substr. MG1655 b0621 -103 4.7 TTGATTTTAATCAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00654 -104 4.5 TTGATTTGCATCAG
Proteus mirabilis HI4320 PMI0652 -127 4.5 TTGATATATGTCAT
Salmonella typhimurium LT2 STM0627 -138 3.6 TTCATCTTTAGCAA
-101 4.1 GTGATTTTAATCAG
Serratia proteamaculans 568 Spro_1579 -107 4 TTGACGGATATCAT
Position: -147
Score: 3.6
Sequence: TCGCGCTAGATCAA
Locus tag: Ent638_1221
Ent638_1221 -147 3.6 TCGCGCTAGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltA
Ortholog function: Citrate synthase (EC 2.3.3.1)
Citrobacter koseri ATCC BAA-895 CKO_02439 -67 3.8 TTGATTTATGTAAC
Enterobacter sp. 638 Ent638_1221 -147 3.6 TCGCGCTAGATCAA
Erwinia amylovora ATCC 49946 EAM_1167 -171 3.7 ATGATACTCATCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4121 -185 4.8 TTTATCTAAATCAA
Escherichia coli str. K-12 substr. MG1655 b0720 -173 3.6 TTATTCGTCATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00489 28 3.6 TTGCCGGACAACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1425 -110 3.6 TTGATGACAAAGAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3138 -56 3.8 CCTATTTAAATCAA
Salmonella typhimurium LT2 STM0730 -213 3.9 TCGAAATTAATCAA
Position: -340
Score: 4
Sequence: TTAATCTTTGTCAA
Locus tag: Ent638_1222
Ent638_1222 -340 4 TTAATCTTTGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Citrobacter koseri ATCC BAA-895 CKO_02438 25 3.6 ATGTGAAAAAACAA
Edwardsiella tarda EIB202 ETAE_2588 10 4
Escherichia coli str. K-12 substr. MG1655 b0721 10 3.6 ATGTGAAAAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00728 -104 3.6 ATGTGAAAAAACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1426 -127 4 TTGTGAAAAAACAA
Proteus mirabilis HI4320 PMI0565 -2 4 TTGTGAAAAAACAA
Salmonella typhimurium LT2 STM0732 10 3.6 ATGTGAAAAAACAA
Serratia proteamaculans 568 Spro_1263 -249 4.1 GTGATCTAAATCAC
Yersinia pestis KIM y3071 -224 3.8 ATGTTATCAATCAG
Position: -90
Score: 4.5
Sequence: TTGATATACGTCAT
Locus tag: Ent638_1272
Ent638_1272 -90 4.5 TTGATATACGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybhK
Ortholog function: Predicted transferase, NAD(P)-binding
Edwardsiella tarda EIB202 ETAE_2348 -92 3.9 TTGATACATGTCAC
Enterobacter sp. 638 Ent638_1272 -90 4.5 TTGATATACGTCAT
Erwinia amylovora ATCC 49946 EAM_1217 -88 4 TTGATATATAGCGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2818 -117 3.7 ATGAGCTTACTCAA
Escherichia coli str. K-12 substr. MG1655 b0780 -147 4.8 TTGATATACATCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00809 -91 4 TTGATGTCGGTCAG
Salmonella typhimurium LT2 STM0801 -146 4.8 TTGATATATATCAT
Yersinia pestis KIM y3024 -190 4.2 TTGTTTAAAATCAC
Position: -236
Score: 4.4
Sequence: ATGACGTATATCAA
Locus tag: Ent638_1273
Ent638_1273 -236 4.4 ATGACGTATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: moaA
Ortholog function: Molybdenum cofactor biosynthesis protein MoaA
Citrobacter koseri ATCC BAA-895 CKO_02345 -253 4.7 CTGATGTATATCAA
Edwardsiella tarda EIB202 ETAE_2347 -380 3.9 GTGACATGTATCAA
Enterobacter sp. 638 Ent638_1273 -236 4.4 ATGACGTATATCAA
Erwinia amylovora ATCC 49946 EAM_1218 -212 4.2 TCGCTATATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2817 -321 3.5 ATGACCTGAGACAA
Escherichia coli str. K-12 substr. MG1655 b0781 -263 4.9 ATGATGTATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00810 -257 4 CTGACCGACATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1499 -155 3.7 TCGTTTTACATTAA
Salmonella typhimurium LT2 STM0802 -264 5 ATGATATATATCAA
Serratia proteamaculans 568 Spro_1320 -312 3.7 GTGATTCCGGTCAA
Yersinia pestis KIM y3023 -310 4.3 GTGATTTTAAACAA
Position: -68
Score: 4.4
Sequence: TTGACGCACATCAA
Locus tag: Ent638_1318
Ent638_1318 -68 4.4 TTGACGCACATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ybiY
Ortholog function: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4)
Citrobacter koseri ATCC BAA-895 CKO_02286 -70 4.1 TTGACCTGCGTCAA
Edwardsiella tarda EIB202 ETAE_0451 -71 5.2 TTGATCAAAATCAA
Enterobacter sp. 638 Ent638_1318 -68 4.4 TTGACGCACATCAA
Escherichia coli str. K-12 substr. MG1655 b0824 -67 4.4 TTGACGCACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00858 -69 4.7 TTGATTTGCGTCAA
Salmonella typhimurium LT2 STM0844 -69 4.4 TTGACGCACATCAA
Serratia proteamaculans 568 Spro_2641 -76 5.1 TTGATCGAAATCAA
Position: -155
Score: 3.3
Sequence: TCTATAAATATCAT
Locus tag: Ent638_1321
Ent638_1321 -155 3.3 TCTATAAATATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: moeA
Ortholog function: Molybdopterin biosynthesis protein MoeA
Edwardsiella tarda EIB202 ETAE_1153 -335 3.8 ATGATACAGATCAC
Enterobacter sp. 638 Ent638_1321 -155 3.3 TCTATAAATATCAT
Erwinia amylovora ATCC 49946 EAM_1284 -244 3.5 CTGTGATAAATCAG
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2836 -383 3.7 ATGATGTAAAGCAG
Escherichia coli str. K-12 substr. MG1655 b0827 18 3.7 TTGATGTCGCTCGA
Photorhabdus luminescens subsp. laumondii TTO1 plu1540 -244 3.9 TTGACAGTGGTCAA
Proteus mirabilis HI4320 PMI0637 -182 3.7 TTAAAATACAACAA
Yersinia pestis KIM y2673 -202 3.8 TTGATATATATATA
Position: -110
Score: 4.4
Sequence: TTGCGCTAAATCAA
Locus tag: Ent638_1390
Ent638_1390 -110 4.4 TTGCGCTAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Citrobacter koseri ATCC BAA-895 CKO_02206 -76 4.4 TTGCGCTAAATCAA
Enterobacter sp. 638 Ent638_1390 -110 4.4 TTGCGCTAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00907 -76 4.4 TTGCGCTAAATCAA
Position: -3
Score: 3.8
Sequence: TCTATGAAAATCAA
Locus tag: Ent638_1418
Ent638_1418 -3 3.8 TCTATGAAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dmsA
Ortholog function: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-)
Citrobacter koseri ATCC BAA-895 CKO_02177 -117 3.6 CTGATTTTTCTCAT
Enterobacter sp. 638 Ent638_1418 -3 3.8 TCTATGAAAATCAA
Escherichia coli str. K-12 substr. MG1655 b0894 -184 4.3 TTGATACCGAACAA
Salmonella typhimurium LT2 STM0964 -96 4.2
Yersinia pestis KIM y0864 -199 4.2 TTGATTCCAGACAA
Position: -74
Score: 4.9
Sequence: ATGATCTATATCAA
Locus tag: Ent638_1424
Ent638_1424 -74 4.9 ATGATCTATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: focA
Ortholog function: Formate efflux transporter (TC 2.A.44 family)
Citrobacter koseri ATCC BAA-895 CKO_02167 -116 4.9 ATGATCTATATCAA
Edwardsiella tarda EIB202 ETAE_2181 -117 4.2 ATGATCCATGTCAA
Enterobacter sp. 638 Ent638_1424 -74 4.9 ATGATCTATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2596 -228 4 ATGATTTTTATTAA
-75 4.5 ATGATCCACATCAA
Escherichia coli str. K-12 substr. MG1655 b0904 -74 4.9 ATGATCTATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00932 -117 4.9 ATGATCTATATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu1614 -267 4.1 TTTATTTGCAACAA
-159 4.7 TTTATTAAAATCAA
-84 4.9 ATGATCTATATCAA
Proteus mirabilis HI4320 PMI0706 -159 4.1 TTATTATTAATCAA
-85 4.5 ATGATCCATATCAA
Salmonella typhimurium LT2 STM0974 -74 4.9 ATGATCTATATCAA
Serratia proteamaculans 568 Spro_1703 -143 3.9 ATAATTTAACTCAA
-81 4.6 ATGATCCAAATCAA
Yersinia pestis KIM y2789 -80 4.5 ATGATCCATATCAA
Position: -181
Score: 3.5
Sequence: TTGACCTGAGGCAA
Locus tag: Ent638_1456
Ent638_1456 -181 3.5 TTGACCTGAGGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ssuE
Ortholog function: FMN reductase (EC 1.5.1.29)
Citrobacter koseri ATCC BAA-895 CKO_02124 -43 3.7 TTAATGAAAATCGA
Enterobacter sp. 638 Ent638_1456 -181 3.5 TTGACCTGAGGCAA
Escherichia coli str. K-12 substr. MG1655 b0937 -278 3.6 GCCATTTAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_00973 -182 3.8 TTGACCTGCGACAA
Serratia proteamaculans 568 Spro_1739 -256 4.6 TTGATTAAAAGCAA
Yersinia pestis KIM y0246 -252 3.7 GTGATCTGGCTCAA
Position: -149
Score: 5
Sequence: TTGATTCATATCAA
Locus tag: Ent638_1624
Ent638_1624 -149 5 TTGATTCATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Citrobacter koseri ATCC BAA-895 CKO_01946 -163 5.2 TTGATGTACATCAA
Edwardsiella tarda EIB202 ETAE_2070 -162 5.1 TTGATTTGAATCAA
Enterobacter sp. 638 Ent638_1624 -149 5.1 TTGATTCATATCAA
Erwinia amylovora ATCC 49946 EAM_1473 -146 4.2 TTGACCAGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1815 -149 5.4 TTGATATATATCAA
Escherichia coli str. K-12 substr. MG1655 b1109 -150 5.2 TTGATTAACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01106 -148 4.8 TTGATGCACATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2821 -150 4.2 TTGATGTTGTTCAA
Proteus mirabilis HI4320 PMI0875 -153 5.5 TTGATATAAATCAA
Salmonella typhimurium LT2 STM1211 -150 4.8 TTGATGCACATCAA
Serratia proteamaculans 568 Spro_1926 -149 5.2 TTGATGTACATCAA
Yersinia pestis KIM y1777 -148 5.4 TTGATATATATCAA
Position: -85
Score: 3.5
Sequence: TTGATCCAGCACAG
Locus tag: Ent638_1834
Ent638_1834 -85 3.5 TTGATCCAGCACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: nikA
Ortholog function: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3)
Citrobacter koseri ATCC BAA-895 CKO_04926 -228 3.8 TTGATCCAGAACAC
Edwardsiella tarda EIB202 ETAE_1379 -80 3.4 TTGATCCATCACAC
Enterobacter sp. 638 Ent638_1834 -85 3.5 TTGATCCAGCACAG
Escherichia coli str. K-12 substr. MG1655 b3476 -86 4 TTGATCCAGAACAG
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03850 -6 4 TTGATTATGCACAA
Position: -33
Score: 4.6
Sequence: TTGACCAATATCAA
Locus tag: Ent638_1853
Ent638_1853 -33 4.6 TTGACCAATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fnr
Ortholog function: Fumarate and nitrate reduction regulatory protein
Citrobacter koseri ATCC BAA-895 CKO_01409 -83 3.8 TTGATGTAAAGTAA
Edwardsiella tarda EIB202 ETAE_1744 -133 3.4 GTGCTATACATCAC
-33 4.6 TTGACCGATATCAA
Enterobacter sp. 638 Ent638_1853 -33 4.6 TTGACCAATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2207 -34 4.6 TTGACCAATATCAA
Escherichia coli str. K-12 substr. MG1655 b1334 -33 4.7 TTGACAAATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01530 -327 4.6 TTGACCAATATCAA
-185 3.5 ATGAGCTTGATCAG
Photorhabdus luminescens subsp. laumondii TTO1 plu2179 -35 3.4 TTGAAGGATATGAA
Proteus mirabilis HI4320 PMI1203 -40 4.5 TTGACACATATCAA
Salmonella typhimurium LT2 STM1660.S -33 4.7 TTGACAAATATCAA
Serratia proteamaculans 568 Spro_2582 -34 4.4 TTGACGCATATCAA
Yersinia pestis KIM y2132 -32 4.4 TTGACGCATATCAA
Position: -107
Score: 3.6
Sequence: TTGATGGGGATTAA
Locus tag: Ent638_1925
Ent638_1925 -107 3.6 TTGATGGGGATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ynfI
Ortholog function: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD
Citrobacter koseri ATCC BAA-895 CKO_01585 -32 4.3
Enterobacter sp. 638 Ent638_1925 -107 3.7 TTGATGGGGATTAA
Escherichia coli str. K-12 substr. MG1655 b1591 -113 4.1 TTGATATGGATTAA
Salmonella typhimurium LT2 STM1495 -116 3.7 TTGACATGGATTAA
Serratia proteamaculans 568 Spro_1690 -164 4.2 TTGATAGCAGACAA
-40 4.2 ATGACGTTTATCAA
Position: -77
Score: 3.9
Sequence: TTGATTTGACGCAA
Locus tag: Ent638_2055
Ent638_2055 -77 3.9 TTGATTTGACGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
Enterobacter sp. 638 Ent638_2055 -77 3.9 TTGATTTGACGCAA
Enterobacter sp. 638 Ent638_2054 -77 3.9 TTGATTTGACGCAA
Escherichia coli str. K-12 substr. MG1655 b1474 -133 4.4 TTGAGGTAGGTCAA
Salmonella typhimurium LT2 STM1570 -126 3.9 TTGATTTGACGCAA
Position: -135
Score: 4.6
Sequence: TTGTTTTATCTCAA
Locus tag: Ent638_2192
Ent638_2192 -135 4.6 TTGTTTTATCTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: acnA
Ortholog function: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99)
Enterobacter sp. 638 Ent638_2192 -135 4.6 TTGTTTTATCTCAA
Erwinia amylovora ATCC 49946 EAM_1866 37 4.4 TGGATGTAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1941 -98 3.7 ATGAGCTTACTCAA
Escherichia coli str. K-12 substr. MG1655 b1276 -133 3.7 TTGCTTTGCCACAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2432 7 4.6 TTGATTTAAAAAAA
Salmonella typhimurium LT2 STM1712 -301 3.9 TTGATTAAACACAG
Yersinia pestis KIM y2063 -37 3.9 TTGAATTAAAACAC
Position: -117
Score: 4.1
Sequence: TTAATCTGGATCAA
Locus tag: Ent638_2283
Ent638_2283 -117 4.1 TTAATCTGGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W; colicin S4 receptor; putative transporter
Citrobacter koseri ATCC BAA-895 CKO_01333 -117 4.1 TTAATCTGGATCAA
Edwardsiella tarda EIB202 ETAE_1528 -157 4.9 TTGATGTCTATCAA
Enterobacter sp. 638 Ent638_2283 -117 4.1 TTAATCTGGATCAA
Erwinia amylovora ATCC 49946 EAM_1884 -160 5.4 TTGATCTAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2303 -160 4.8 TTGATCTGGATCAA
Escherichia coli str. K-12 substr. MG1655 b1256 -162 4.8 TTGATTTAAATCAC
-117 4.1 TTAATCCAGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_01248 -247 4.2 TTGATTTCACTCAT
-80 4.1 TTAATCTGGATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2478 -160 5 TTGATTTGGATCAA
Proteus mirabilis HI4320 PMI1350 -164 4.8 TTGATGTGGATCAA
Salmonella typhimurium LT2 STM1732 -117 4.1 TTAATCTGGATCAA
Serratia proteamaculans 568 Spro_2674 -131 5 TTGATTCAGATCAA
Yersinia pestis KIM y2044 -171 3.6 ATGATAAATGGCAA
-147 4.4 ATGATCCAGATCAA
Position: -249
Score: 4.5
Sequence: TTGATTCAGATCAT
Locus tag: Ent638_2304
Ent638_2304 -249 4.5 TTGATTCAGATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: adhE
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10)
Citrobacter koseri ATCC BAA-895 CKO_01318 -238 4.1 TTGATCTGGATCAC
Enterobacter sp. 638 Ent638_2304 -249 4.5 TTGATTCAGATCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2326 -311 3.6 TCGATGTTGATCAC
-305 3.8 TTGATCACAAAAAA
Escherichia coli str. K-12 substr. MG1655 b1241 -237 4.3 TTGATTTGGATCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02199 -233 4.7 TTGATCTAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu2496 -134 4.5 GTGATTAAGATCAA
Proteus mirabilis HI4320 PMI1486 -242 3.8 GTGATGTAGATCAC
Salmonella typhimurium LT2 STM1749 -238 4.7 TTGATTTAGATCAC
Serratia proteamaculans 568 Spro_2704 -274 4.4 ATGATTTAAATCAC
Position: -100
Score: 4.7
Sequence: TTGATCGTTATCAA
Locus tag: Ent638_2315
Ent638_2315 -100 4.7 TTGATCGTTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Citrobacter koseri ATCC BAA-895 CKO_01301 -105 4.7 TTGATCGTTATCAA
Enterobacter sp. 638 Ent638_2315 -100 4.7 TTGATCGTTATCAA
Escherichia coli str. K-12 substr. MG1655 b1224 -105 4.7 TTGATCGTTATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02214 -106 4.6 TTGATCGCTATCAA
Salmonella typhimurium LT2 STM1764 -105 4.7 TTGATCGTTATCAA
Position: -251
Score: 5.4
Sequence: TTGATATAAATCAA
Locus tag: Ent638_2317
Ent638_2317 -251 5.4 TTGATATAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narX
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-)
Enterobacter sp. 638 Ent638_2317 -251 5.5 TTGATATAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2029 -268 4.9 TTGATGCAAATCAA
Escherichia coli str. K-12 substr. MG1655 b1222 -279 5.4 TTGATGTAAATCAA
-241 4.6 TTGATATTTATCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02216 -251 5.5 TTGATATAAATCAA
Proteus mirabilis HI4320 PMI3569 -235 4.5 ATGATCTGCATCAA
Salmonella typhimurium LT2 STM1766 -281 5.5 TTGATATAAATCAA
Serratia proteamaculans 568 Spro_2899 -301 5.4 TTGATGTAAATCAA
Position: -82
Score: 4.3
Sequence: TTGTCTTAAATCAT
Locus tag: Ent638_2338
Ent638_2338 -82 4.3 TTGTCTTAAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hemA
Ortholog function: Glutamyl-tRNA reductase (EC 1.2.1.70)
Enterobacter sp. 638 Ent638_2338 -82 4.3 TTGTCTTAAATCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2189 -134 4.8
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02235 -143 4.4 TTGTCTGAAATCAA
Salmonella typhimurium LT2 STM1777 -131 4.3 TTGTCTTAAATCAT
Position: -93
Score: 3.6
Sequence: TTGAATTTATACAA
Position: 0
Score: 3.6
Sequence: ATGATCACCATCGA
Position: 15
Score: 3.5
Sequence: TTTATAGTCATCAT
Locus tag: Ent638_2479
Ent638_2479 -93 3.6 TTGAATTTATACAA
0 3.6 ATGATCACCATCGA
15 3.5 TTTATAGTCATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuB
Ortholog function: C4-dicarboxylate transporter DcuB
Edwardsiella tarda EIB202 ETAE_2844 -271 3.4 TTATTTTTTATTAA
Enterobacter sp. 638 Ent638_2479 -93 3.6 TTGAATTTATACAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1533 -279 3.7 TTTATTTTCATGAA
-243 4.5 TAGATTTAGATCAA
Escherichia coli str. K-12 substr. MG1655 b4123 -283 4 CCGATAAATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04367 -210 3.4 TCTACTCATATCAA
Proteus mirabilis HI4320 PMI0389 -78 3.4 TTGTTTTTTTGCAA
Salmonella typhimurium LT2 STM4301 -72 3.5 TTCACAAAAATCAG
Serratia proteamaculans 568 Spro_3863 -189 3.8 CAGATTAAAATCAA
Yersinia pestis KIM y0901 -239 3.4 TTAATTTAAAGCAC
Position: -122
Score: 3.7
Sequence: TTTATATAGGTCAC
Locus tag: Ent638_2555
Ent638_2555 -122 3.7 TTTATATAGGTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuS
Ortholog function: Fumarate respiration sensor kinase protein DcuS
Citrobacter koseri ATCC BAA-895 CKO_03745 -199 3.3 GTGATCCCCATCAG
Enterobacter sp. 638 Ent638_2555 -122 3.7 TTTATATAGGTCAC
Erwinia amylovora ATCC 49946 EAM_1542 -115 3.4 TTGCTTAAGATCGT
Escherichia coli str. K-12 substr. MG1655 b4125 -311 3.6 TTGAGATTAAATAA
Salmonella typhimurium LT2 STM4304 -274 4.8 TTGATTGTGATCAA
-177 3.9 CTGATGAAAATAAA
Serratia proteamaculans 568 Spro_1959 -188 3.3 TTAATGGCTATCAT
Position: -112
Score: 3.7
Sequence: GTGACATAGATCAG
Locus tag: Ent638_2642
Ent638_2642 -112 3.7 GTGACATAGATCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Citrobacter koseri ATCC BAA-895 CKO_00756 -337 4 TTGATTACTATCTA
Enterobacter sp. 638 Ent638_2642 -112 3.7 GTGACATAGATCAG
Erwinia amylovora ATCC 49946 EAM_2150 -264 3.8 TTCTCTTAAGTCAA
-169 4 TTTTTTTTAAACAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1444 -228 3.3 TTGAGTGGTAACAT
Escherichia coli str. K-12 substr. MG1655 b2029 -375 3.4 ATGGCTTCGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02499 -322 3.7 TTTTTATAGTTCAA
Proteus mirabilis HI4320 PMI0655 -7 3.7 TTATTTCATGTCAA
Serratia proteamaculans 568 Spro_1608 -384 3.3 ATTATTTGAATTAA
Position: -197
Score: 4.2
Sequence: TTGATTTCGAACAT
Locus tag: Ent638_2804
Ent638_2804 -197 4.2 TTGATTTCGAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: Glycerol-3-phosphate transporter
Citrobacter koseri ATCC BAA-895 CKO_00537 -257 3.7 TCGTTTTTTATCAT
Edwardsiella tarda EIB202 ETAE_3116 -301 3.8 GTGATCAAAATCAC
Enterobacter sp. 638 Ent638_2804 -197 4.2 TTGATTTCGAACAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4166 -249 4.3 TTGATAAAGAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02646 -214 3.8 TTGATTTCGAGCAT
Photorhabdus luminescens subsp. laumondii TTO1 plu4119 -306 4.2 TTGATAAAGAACAG
Proteus mirabilis HI4320 PMI3591 -287 4 TTGATAATGAGCAA
-45 4.9 TTGTTTAATATCAA
Salmonella typhimurium LT2 STM2283 -256 3.7 TCGTTTTTTATCAT
Serratia proteamaculans 568 Spro_0199 -305 4.3 TTGATAAGGAACAA
Position: -164
Score: 3.7
Sequence: TTACTGTGAATCAA
Position: -69
Score: 4.3
Sequence: ATGTTCGAAATCAA
Position: -65
Score: 3.5
Sequence: TCGAAATCAAACAA
Locus tag: Ent638_2805
Ent638_2805 -164 3.7 TTACTGTGAATCAA
-69 4.3 ATGTTCGAAATCAA
-65 3.5 TCGAAATCAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Citrobacter koseri ATCC BAA-895 CKO_00536 -30 3.8 ATGATAAAAAACGA
Edwardsiella tarda EIB202 ETAE_3115 -78 4.1 TTGCTCCTTATCAA
Enterobacter sp. 638 Ent638_2805 -69 4.3 ATGTTCGAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4165 -84 4.5 TTGCTCTTTATCAA
Escherichia coli str. K-12 substr. MG1655 b2241 -71 3.6 ATGCGCGAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02647 -71 4.1 ATGCTCGAAATCAA
Proteus mirabilis HI4320 PMI3592 -107 4.2 TTGCTCATTATCAA
Salmonella typhimurium LT2 STM2284 -30 3.8 ATGATAAAAAACGA
Serratia proteamaculans 568 Spro_0200 -74 4.3 TTGTTCCTTATCAA
Yersinia pestis KIM y0404 -145 4.3 TTGATCACAATCAT
-91 4.4 TTGTTTCTTATCAA
Position: -92
Score: 4.1
Sequence: ATGATGTTAATCAT
Locus tag: Ent638_2840
Ent638_2840 -92 4.1 ATGATGTTAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ackA
Ortholog function: Acetate kinase (EC 2.7.2.1)
Citrobacter koseri ATCC BAA-895 CKO_00498 -92 4.1 ATGATGTTAATCAT
Edwardsiella tarda EIB202 ETAE_2397 -93 4.1 ATGATGTTAATCAT
Enterobacter sp. 638 Ent638_2840 -92 4.1 ATGATGTTAATCAT
Erwinia amylovora ATCC 49946 EAM_2301 -119 3.9 TTGCTTTCGGACAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3039 -91 4.1 ATGATGTTAATCAT
Escherichia coli str. K-12 substr. MG1655 b2296 -92 4.1 ATGATGTTAATCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02687 -91 4.1 ATGATGTTAATCAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3095 -117 4.1 ATGATGTTAATCAT
Proteus mirabilis HI4320 PMI1771 -165 3.7 TTGATGATTGGCAA
Salmonella typhimurium LT2 STM2337 -92 4.1 ATGATGTTAATCAT
Serratia proteamaculans 568 Spro_3316 -121 4.1 ATGATGTTAATCAT
Yersinia pestis KIM y1622 -163 4.1 ATGATGTTAATCAT
Position: -97
Score: 4.4
Sequence: TTGATCACCGTCAA
Locus tag: Ent638_2986
Ent638_2986 -97 4.4 TTGATCACCGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: upp
Ortholog function: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Citrobacter koseri ATCC BAA-895 CKO_00293 -103 4.6 TTGATCCATGTCAA
Edwardsiella tarda EIB202 ETAE_1087 -97 4.5 TTGATTGAGATCAT
Enterobacter sp. 638 Ent638_2986 -97 4.4 TTGATCACCGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1255 -169 4.3 TTGATCTGGATCAG
Escherichia coli str. K-12 substr. MG1655 b2498 -95 4.6 TTGACTAAAGTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02821 -96 5 TTGATATACGTCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu2759 -103 5.1 TTGATGAAAATCAA
Proteus mirabilis HI4320 PMI1574 -97 5.1 TTGATCAATATCAA
Salmonella typhimurium LT2 STM2498 -103 4.6 TTGATCCAGGTCAA
Yersinia pestis KIM y1408 -98 4.4 TTGATCTGAATCAG
Position: -147
Score: 5.2
Sequence: TTGATTTAAGTCAA
Locus tag: Ent638_2992
Ent638_2992 -147 5.2 TTGATTTAAGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfgF
Ortholog function: Predicted cytochrome C-type biogenesis protein
Enterobacter sp. 638 Ent638_2992 -147 5.2 TTGATTTAAGTCAA
Position: -172
Score: 5.1
Sequence: TTGATATAAAACAA
Position: -120
Score: 5.1
Sequence: TTGATTTAGGTCAA
Locus tag: Ent638_3064
Ent638_3064 -172 5.1 TTGATATAAAACAA
-120 5.1 TTGATTTAGGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfiD
Ortholog function: Stress-induced alternate pyruvate formate-lyase subunit
Citrobacter koseri ATCC BAA-895 CKO_00205 -176 5.1
-123 5.6
Enterobacter sp. 638 Ent638_3064 -172 5.2
-120 5.1
Salmonella typhimurium LT2 STM2646 -177 5.1
-124 5.6
Position: -194
Score: 5
Sequence: TTGACCTAAATCAA
Position: -142
Score: 5.1
Sequence: TTGTTTTATATCAA
Position: 34
Score: 4.2
Sequence: CTGATGAAAAACAA
Locus tag: Ent638_3065
Ent638_3065 -194 5 TTGACCTAAATCAA
-142 5.1 TTGTTTTATATCAA
34 4.2 CTGATGAAAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ung
Ortholog function: Uracil-DNA glycosylase (EC 3.2.2.27)
Citrobacter koseri ATCC BAA-895 CKO_00204 -209 5.6 TTGATTTAAATCAA
-156 5.1 TTGTTTTACATCAA
Edwardsiella tarda EIB202 ETAE_2734 -396 4.1 TTGAGATAGAGCAA
-280 5.4 TTGATCTAAATCAA
-227 4.7 ATGTTTTACATCAA
Enterobacter sp. 638 Ent638_3065 -194 5 TTGACCTAAATCAA
-142 5.1 TTGTTTTATATCAA
34 4.2 CTGATGAAAAACAA
Erwinia amylovora ATCC 49946 EAM_2526 -177 4.9 TTGATGCAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3289 -228 5.1 TTGACTTAAATCAA
-175 5.1 TTGTTTTATATCAA
Escherichia coli str. K-12 substr. MG1655 b2580 -197 5.6 TTGATTTAAATCAA
-144 5.1 TTGTTTTACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02903 -206 5.5 TTGATATAAATCAA
-153 5.1 TTGTTTTACATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu3371 -233 4.1 TTGATTCAGAACAG
Proteus mirabilis HI4320 PMI1899 -221 5.1 TTGATAAATATCAA
-168 5.2 TTGTTTTAAATCAA
Salmonella typhimurium LT2 STM2647 -208 5.6 TTGATTTAAATCAA
-155 5.1 TTGTTTTACATCAA
Serratia proteamaculans 568 Spro_3683 -222 5 TTGATTAAAGTCAA
-169 4.4 ATGTTTTATGTCAA
Yersinia pestis KIM y1281 -213 5.2 TTGATTCAAATCAA
-160 4.7 ATGTTTTATATCAA
Position: 3
Score: 4
Sequence: TTTACCTTTATCAA
Locus tag: Ent638_3193
Ent638_3193 3 4 TTTACCTTTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hyfH
Ortholog function: Hydrogenase-4 component H (EC 1.-.-.-)
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1240 -91 3.5 TTGAATTAAAGAAA
Escherichia coli str. K-12 substr. MG1655 b2488 -29 3.8 ATGTTTCATATCAT
Proteus mirabilis HI4320 PMI2521 -114 4.9 TTGATTTTTAACAA
Position: 19
Score: 4.1
Sequence: TTTATAAAGGTCAA
Locus tag: Ent638_3376
Ent638_3376 19 4.1 TTTATAAAGGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ycgM
Ortholog function: Fumarylacetoacetate hydrolase family protein
Enterobacter sp. 638 Ent638_3376 19 4.1 TTTATAAAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA2575 -93 3.8 TTGAGCCAAATAAA
Position: 0
Score: 3.7
Sequence: ATGCAATACATCAA
Locus tag: Ent638_3545
Ent638_3545 0 3.7 ATGCAATACATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaA
Ortholog function: Altronate hydrolase (EC 4.2.1.7)
Citrobacter koseri ATCC BAA-895 CKO_04493 -43 3.8 TTGATCCAACTCAC
Enterobacter sp. 638 Ent638_3545 -105 4.2 TTGATCTAACTCAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0647 -225 3.9 TTGAGTGATATCAC
Escherichia coli str. K-12 substr. MG1655 b3091 -106 4.2 TTGATCTAACTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03519 -125 4.2 TTGATCTAACTCAC
Serratia proteamaculans 568 Spro_4320 -227 3.9 TTGAGTGATATCAC
Yersinia pestis KIM y3598 -225 3.8 TTGAGTGACATCAC
Position: -105
Score: 4.2
Sequence: TTGATCTAACTCAC
Locus tag: Ent638_3546
Ent638_3546 -105 4.2 TTGATCTAACTCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaC
Ortholog function: Uronate isomerase (EC 5.3.1.12)
Citrobacter koseri ATCC BAA-895 CKO_04494 -43 3.8 TTGATCCAACTCAC
Enterobacter sp. 638 Ent638_3546 -105 4.2 TTGATCTAACTCAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0645 -225 3.9 TTGAGTGATATCAC
Escherichia coli str. K-12 substr. MG1655 b3092 -106 4.2 TTGATCTAACTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03520 -125 4.2 TTGATCTAACTCAC
Position: -184
Score: 4.5
Sequence: TTGATCAATATCAG
Locus tag: Ent638_3565
Ent638_3565 -184 4.5 TTGATCAATATCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: tdcA
Ortholog function: Threonine catabolism transcriptional regulator TdcA, LysR family
Citrobacter koseri ATCC BAA-895 CKO_04518 -183 4.2 TTGACAAAAATCAT
Edwardsiella tarda EIB202 ETAE_0893 -131 3.8 TTGCTCTTTATAAA
Enterobacter sp. 638 Ent638_3565 -184 4.5 TTGATCAATATCAG
Escherichia coli str. K-12 substr. MG1655 b3118 -183 4.2 TTGACAAAAATCAG
Salmonella typhimurium LT2 STM3245 -184 4.7 TTGATTGAAATCAG
Position: -65
Score: 3.7
Sequence: TTTATTCAAATGAA
Position: -32
Score: 4
Sequence: TTGATCCAGGTCAT
Locus tag: Ent638_3655
Ent638_3655 -65 3.7 TTTATTCAAATGAA
-32 4 TTGATCCAGGTCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yhcC
Ortholog function: COG1242: Predicted Fe-S oxidoreductase
Enterobacter sp. 638 Ent638_3655 -65 3.7 TTTATTCAAATGAA
-32 4 TTGATCCAGGTCAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0313 -70 3.7 TTGATCGCGGTCAT
Escherichia coli str. K-12 substr. MG1655 b3211 -75 4 TTGATCCAGGTCAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03623 -75 4 TTGATCCAGGTCAT
Salmonella typhimurium LT2 STM3329 -75 4 TTGATCCAGGTCAT
Serratia proteamaculans 568 Spro_4343 -74 4.2 TTGATCTCTGTCAT
Yersinia pestis KIM y0127 -133 4.2 TTGATCTCTGTCAT
Position: -72
Score: 5
Sequence: TTGATTTGCATCAA
Locus tag: Ent638_3793
Ent638_3793 -72 5 TTGATTTGCATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nirB
Ortholog function: Nitrite reductase, large subunit (EC 1.7.1.4)
Citrobacter koseri ATCC BAA-895 CKO_04789 -72 5.4 TTGATTTACATCAA
Enterobacter sp. 638 Ent638_3793 -72 5 TTGATTTGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4079 -71 5.3 TTGATATACATCAA
Escherichia coli str. K-12 substr. MG1655 b3365 -72 5.4 TTGATTTACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03752 -72 5 TTGATTTGCATCAA
Proteus mirabilis HI4320 PMI1479 -72 5.1 TTGATATTCATCAA
Salmonella typhimurium LT2 STM3474 -72 5.4 TTGATTTACATCAA
Serratia proteamaculans 568 Spro_4595 -72 5 TTGATTTGCATCAA
Yersinia pestis KIM y3945 -71 5.4 TTGATTTACATCAA
Position: -133
Score: 4.2
Sequence: TTGAGCAAGGTCAA
Locus tag: Ent638_3821
Ent638_3821 -133 4.2 TTGAGCAAGGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron transport protein A
Citrobacter koseri ATCC BAA-895 CKO_04830 -204 4.1 TTGAGCCATGTCAA
Enterobacter sp. 638 Ent638_3821 -133 4.2 TTGAGCAAGGTCAA
Escherichia coli str. K-12 substr. MG1655 b3408 -203 4.4 TTGAGCCACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03778 -198 3.8 TTGCGGCATATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu0209 -206 3.5 TGGATGCAAATCAT
Proteus mirabilis HI4320 PMI2920 -190 5.2 TTGATGTACATCAA
Salmonella typhimurium LT2 STM3505 -204 4.4 TTGAGCCATATCAA
Serratia proteamaculans 568 Spro_4628 -284 3.8 CTGATTTAACTCAC
Yersinia pestis KIM y3912 -93 4 ATTATTTAAATCAT
Position: -340
Score: 3.6
Sequence: CTGATACGCGTCAA
Locus tag: Ent638_3830
Ent638_3830 -340 3.6 CTGATACGCGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: malP
Ortholog function: Maltodextrin phosphorylase (EC 2.4.1.1)
Enterobacter sp. 638 Ent638_3830 -340 3.7 CTGATACGCGTCAA
Position: -241
Score: 3.7
Sequence: TTGTTAAATCTCAG
Locus tag: Ent638_3840
Ent638_3840 -241 3.7 TTGTTAAATCTCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: glgB
Ortholog function: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
Enterobacter sp. 638 Ent638_3840 -241 3.7 TTGTTAAATCTCAG
Position: -31
Score: 3.5
Sequence: TTTATTTGCACCAA
Locus tag: Ent638_3963
Ent638_3963 -31 3.5 TTTATTTGCACCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ysgA
Ortholog function: Predcited carboxymethylenebutenolidase (EC 3.1.1.45)
Citrobacter koseri ATCC BAA-895 CKO_00172 -133 4.1 GTGATTTACATCAC
Erwinia amylovora ATCC 49946 EAM_0199 -199 3.6 TTAATCAAAATGAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0184 -155 3.8 GTGACTTAAATCAC
Salmonella typhimurium LT2 STM3967 -169 4.2 ATGACGTAAAACAA
Serratia proteamaculans 568 Spro_0243 -174 3.8 TTAATGCAGGTCAA
Yersinia pestis KIM y0443 -296 4.2 GTGATTTAAATCAC
Position: -174
Score: 4
Sequence: CTGACCTGAATCAA
Locus tag: Ent638_4056
Ent638_4056 -174 4 CTGACCTGAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Citrobacter koseri ATCC BAA-895 CKO_03085 -132 4 CTGACCTGAATCAA
Edwardsiella tarda EIB202 ETAE_3450 -223 4 CTGACCTGAATCAA
Enterobacter sp. 638 Ent638_4056 -174 4 CTGACCTGAATCAA
Erwinia amylovora ATCC 49946 EAM_0103 -31 4 ATTATTTGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4307 -140 4 CTGACCTGAATCAA
Escherichia coli str. K-12 substr. MG1655 b3916 -125 4 CTGACCTGAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04223 -123 4 CTGACCTGAATCAA
Photorhabdus luminescens subsp. laumondii TTO1 plu4774 -203 4.1 TTGATCTCAAAAAA
Proteus mirabilis HI4320 PMI3203 -194 3.7 TTAATGCGCATCAA
Salmonella typhimurium LT2 STM4062 -126 4 CTGACCTGAATCAA
Serratia proteamaculans 568 Spro_4807 -145 4.1 GTGACTTGAATCAA
Yersinia pestis KIM y0059 -148 4.2 CTGACTTGAATCAA
Position: -132
Score: 3.6
Sequence: ATGATACAAAAAAA
Locus tag: Ent638_4063
Ent638_4063 -132 3.6 ATGATACAAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Enterobacter sp. 638 Ent638_4063 -132 3.6 ATGATACAAAAAAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0092 -143 3.5 ATGAAGTAAAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04217 -146 4.2 TTGTTCTACATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0075 -346 3.6 TTATGTCAAATCAA
Proteus mirabilis HI4320 PMI3036 -164 3.8 TTTATTTAAAATAA
-85 4 ATGATTTTCATTAA
Position: -292
Score: 3.6
Sequence: TTGATTAATATGAC
Locus tag: Ent638_4125
Ent638_4125 -292 3.6 TTGATTAATATGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpI
Ortholog function: ATP synthase protein I
Citrobacter koseri ATCC BAA-895 CKO_00079 -122 4.2 TTGTTTGAAATCAC
Enterobacter sp. 638 Ent638_4125 -292 3.7 TTGATTAATATGAC
Erwinia amylovora ATCC 49946 EAM_3481 -124 3.9 TCGATTGAAATCAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4519 -191 3.7 ATGATTGTTAGCAA
Escherichia coli str. K-12 substr. MG1655 b3739 -123 4.2 TTGTTTGAAATCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04144 -122 4.2 TTGTTTGAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0047 -225 3.9 ATTATTAAAAACAA
Proteus mirabilis HI4320 PMI3057 -130 4
Salmonella typhimurium LT2 STM3872 -122 4.2 TTGTTTGAAATCAC
Position: -27
Score: 4.2
Sequence: TTTATTTGAAACAA
Locus tag: Ent638_4127
Ent638_4127 -27 4.2 TTTATTTGAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: atpE
Ortholog function: ATP synthase C chain (EC 3.6.3.14)
Citrobacter koseri ATCC BAA-895 CKO_00077 -122 4.2 TTGTTTGAAATCAC
Enterobacter sp. 638 Ent638_4127 -292 3.7 TTGATTAATATGAC
Erwinia amylovora ATCC 49946 EAM_3479 -124 3.9 TCGATTGAAATCAC
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4517 -191 3.7 ATGATTGTTAGCAA
Escherichia coli str. K-12 substr. MG1655 b3737 -123 4.2 TTGTTTGAAATCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04142 -122 4.2 TTGTTTGAAATCAC
Photorhabdus luminescens subsp. laumondii TTO1 plu0045 -225 3.9 ATTATTAAAAACAA
Proteus mirabilis HI4320 PMI3059 -130 4
Salmonella typhimurium LT2 STM3870 -122 4.2 TTGTTTGAAATCAC
Position: -273
Score: 4.9
Sequence: TTGTTTTTAATCAA
Locus tag: Ent638_4137
Ent638_4137 -273 4.9 TTGTTTTTAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Citrobacter koseri ATCC BAA-895 CKO_00065 -243 4.4 CTGTTTTTAATCAA
Edwardsiella tarda EIB202 ETAE_3538 -93 3.8 TTTACTGTCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4477 -52 3.6 CTGATTGATAACGA
Escherichia coli str. K-12 substr. MG1655 b3728 -138 3.8 CTTATTTAAATCAG
Photorhabdus luminescens subsp. laumondii TTO1 plu0214 -33 3.9 TTGTTGATTCTCAA
Proteus mirabilis HI4320 PMI2893 -46 4 TTGATAGATGTCGA
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