Propagation of Fnr regulog to Enterobacter sp. 638
Source regulog: | Fnr - Enterobacteriales |
Regulator type: | Transcription factor |
Regulator family: | CRP |
Regulation mode: | activator (repressor) |
Biological process: | Energy metabolism; Anaerobic metabolism |
Effector: | Oxygen |
Phylum: | Gammaproteobacteria |
Propagated regulon: | |
Target genome | Enterobacter sp. 638 |
Orthologous TF(s) | Ent638_1853 |
Regulated genes | 74 |

Locus tag | Position | Score | Sequence | |
---|---|---|---|---|
Position: -111
Score: 4 Sequence: TTGATTTTAGAAAA
Locus tag: Ent638_0218
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Ent638_0218 | -111 | 4 | TTGATTTTAGAAAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: aceB | ||||
Ortholog function: Malate synthase (EC 2.3.3.9) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03906 | -162 | 4.2 | TTTATTGTTATCAA |
Enterobacter sp. 638 | Ent638_0218 | -111 | 4 | TTGATTTTAGAAAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04395 | -154 | 4.1 | TTCATTGTTATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4396 | -61 | 4 | |
Proteus mirabilis HI4320 | PMI2764 | -64 | 4.2 | |
Position: -25
Score: 3.8 Sequence: TTGTTAATAAGCAA
Locus tag: Ent638_0325
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Ent638_0325 | -25 | 3.8 | TTGTTAATAAGCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dcuA | ||||
Ortholog function: C4-dicarboxylate transporter DcuA | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03697 | -25 | 4.4 | TTGTTAAACAACAA |
Citrobacter koseri ATCC BAA-895 | CKO_03697 | -25 | 4.4 | TTGTTAAACAACAA |
Enterobacter sp. 638 | Ent638_0325 | -25 | 3.8 | TTGTTAATAAGCAA |
Enterobacter sp. 638 | Ent638_0325 | -25 | 3.8 | TTGTTAATAAGCAA |
Erwinia amylovora ATCC 49946 | EAM_0415 | -194 | 4 | TTGATATAACACGA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0620 | -288 | 4 | TTGTTCTAAAATAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04528 | -25 | 4.5 | TTGTTAAAAAACAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04528 | -25 | 4.5 | TTGTTAAAAAACAA |
Salmonella typhimurium LT2 | STM4325 | -25 | 4.4 | TTGTTAAACAACAA |
Salmonella typhimurium LT2 | STM4325 | -25 | 4.4 | TTGTTAAACAACAA |
Position: -184
Score: 3.5 Sequence: TTAATAATTATCAT
Position: 0
Score: 3.5 Sequence: ATGTTAAACAACAT
Locus tag: Ent638_0326
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Ent638_0326 | -184 | 3.5 | TTAATAATTATCAT | |
0 | 3.5 | ATGTTAAACAACAT | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: aspA | ||||
Ortholog function: Aspartate ammonia-lyase (EC 4.3.1.1) | ||||
Edwardsiella tarda EIB202 | ETAE_0311 | 19 | 3.5 | TTGAAGAAGATCTA |
Enterobacter sp. 638 | Ent638_0326 | -184 | 3.6 | TTAATAATTATCAT |
Erwinia amylovora ATCC 49946 | EAM_0416 | -194 | 4 | TTGATATAACACGA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0621 | -288 | 4 | TTGTTCTAAAATAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04529 | 0 | 3.5 | ATGTTAAACAACAT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4137 | -362 | 4.2 | TTGATTTGGATGAA |
-198 | 3.8 | ATCACATATATCAA | ||
Proteus mirabilis HI4320 | PMI2546 | -202 | 3.7 | ATGAGATAGATCAC |
Position: -31
Score: 3.6 Sequence: TTGCGGAATAACAA
Locus tag: Ent638_0343
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Ent638_0343 | -31 | 3.6 | TTGCGGAATAACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: frdA | ||||
Ortholog function: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03678 | -151 | 4 | TTAATCAGAATCAA |
Enterobacter sp. 638 | Ent638_0343 | -31 | 3.6 | TTGCGGAATAACAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4124 | -239 | 4.1 | |
Proteus mirabilis HI4320 | PMI3588 | -208 | 4 | |
Salmonella typhimurium LT2 | STM4343 | -191 | 4.4 | TTAATCAAAATCAA |
Serratia proteamaculans 568 | Spro_0419 | -63 | 3.7 | TTTATAAATATTAA |
Position: -244
Score: 4.6 Sequence: TTGTTCTGAATCAA
Position: -213
Score: 4.2 Sequence: TTGATGCAAATCAC
Locus tag: Ent638_0437
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Ent638_0437 | -244 | 4.6 | TTGTTCTGAATCAA | |
-213 | 4.2 | TTGATGCAAATCAC | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: nrdD | ||||
Ortholog function: Ribonucleotide reductase of class III (anaerobic), large subunit (EC 1.17.4.2) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03580 | -235 | 4.2 | TTGATGCAAATCAC |
Edwardsiella tarda EIB202 | ETAE_0423 | -196 | 4.7 | TTGATTCAGGTCAA |
Enterobacter sp. 638 | Ent638_0437 | -244 | 4.7 | TTGTTCTGAATCAA |
-213 | 4.2 | TTGATGCAAATCAC | ||
Erwinia amylovora ATCC 49946 | EAM_3059 | -106 | 4.2 | TTGCTTCAGGTCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0375 | -182 | 4.8 | TTGCTCTACATCAA |
Escherichia coli str. K-12 substr. MG1655 | b4238 | -249 | 4.8 | TTGAGCTACATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04646 | -248 | 4.2 | TTGTTCTGGGTCAA |
-217 | 4.2 | TTGATGCAAATCAC | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu4499 | -160 | 4.7 | TTGTTTCAGATCAA |
Proteus mirabilis HI4320 | PMI3451 | -184 | 4.9 | TTGATTTAGATCAG |
Salmonella typhimurium LT2 | STM4452 | -249 | 5 | TTGTTCTACATCAA |
-218 | 4.2 | TTGATGCAAATCAC | ||
Serratia proteamaculans 568 | Spro_0525 | -217 | 4.7 | TTGTTCTACGTCAA |
Yersinia pestis KIM | y0733 | -192 | 4.6 | TTGTTCTAGGTCAA |
Position: -291
Score: 5 Sequence: TTGATATATGTCAA
Locus tag: Ent638_0562
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Ent638_0562 | -291 | 5 | TTGATATATGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: arcA | ||||
Ortholog function: Aerobic respiration control protein arcA | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03387 | -291 | 5.1 | TTGATATATGTCAA |
Edwardsiella tarda EIB202 | ETAE_0561 | -300 | 5.1 | TTGATATATGTCAA |
Enterobacter sp. 638 | Ent638_0562 | -291 | 5.1 | TTGATATATGTCAA |
Erwinia amylovora ATCC 49946 | EAM_0640 | -399 | 4.5 | TTGATGCAGGTCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3893 | -339 | 5.1 | TTGATATATGTCAA |
Escherichia coli str. K-12 substr. MG1655 | b4401 | -291 | 5.1 | TTGATATATGTCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04856 | -291 | 5.1 | TTGATATATGTCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0562 | -282 | 4.9 | TTGATGTACGTCAA |
Proteus mirabilis HI4320 | PMI3719 | -343 | 4 | ATTACATAAATCAA |
-282 | 4.6 | TTGATATGTGTCAA | ||
Salmonella typhimurium LT2 | STM4598 | -291 | 5.1 | TTGATATATGTCAA |
Serratia proteamaculans 568 | Spro_0681 | -299 | 5.1 | TTGATATATGTCAA |
Yersinia pestis KIM | y3721 | -298 | 5.1 | TTGATATATGTCAA |
Position: -116
Score: 4.7 Sequence: CTGATTTCAATCAA
Locus tag: Ent638_0659
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Ent638_0659 | -116 | 4.7 | CTGATTTCAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pdhR | ||||
Ortholog function: Pyruvate dehydrogenase complex transcriptional regulator PdhR, GntR family | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03260 | -116 | 4.7 | CTGATTTCAATCAA |
Edwardsiella tarda EIB202 | ETAE_0658 | -165 | 4.5 | TTGATTGTTAACAA |
-139 | 5 | ATGATTTACATCAA | ||
Enterobacter sp. 638 | Ent638_0659 | -116 | 4.7 | CTGATTTCAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -116 | 4.2 | GTGATTTAGCTCAA |
Escherichia coli str. K-12 substr. MG1655 | b0113 | -115 | 4.8 | ATGATTTCAATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -114 | 4.7 | CTGATTTCAATCAA |
Proteus mirabilis HI4320 | PMI2047 | -245 | 4 | ATGTGTTTAATCAA |
-134 | 4.2 | ATGATTTCGCTCAA | ||
Salmonella typhimurium LT2 | STM0151 | -116 | 4.7 | CTGATTTCAATCAA |
Serratia proteamaculans 568 | Spro_4012 | -117 | 4.6 | CTGATTTCGATCAA |
Yersinia pestis KIM | y0766 | -135 | 4.4 | ATGATTTCGGTCAA |
Position: -102
Score: 4.4 Sequence: TTGATTTTAGTCAT
Locus tag: Ent638_1152
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Ent638_1152 | -102 | 4.4 | TTGATTTTAGTCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dcuC | ||||
Ortholog function: C4-dicarboxylate transporter DcuC (TC 2.A.61.1.1) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02537 | -106 | 4.7 | TTGATTTTAATCAG |
Edwardsiella tarda EIB202 | ETAE_1192 | -147 | 4.1 | TTGACCAATATCAG |
Enterobacter sp. 638 | Ent638_1152 | -102 | 4.4 | TTGATTTTAGTCAT |
Escherichia coli str. K-12 substr. MG1655 | b0621 | -103 | 4.7 | TTGATTTTAATCAG |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00654 | -104 | 4.5 | TTGATTTGCATCAG |
Proteus mirabilis HI4320 | PMI0652 | -127 | 4.5 | TTGATATATGTCAT |
Salmonella typhimurium LT2 | STM0627 | -138 | 3.6 | TTCATCTTTAGCAA |
-101 | 4.1 | GTGATTTTAATCAG | ||
Serratia proteamaculans 568 | Spro_1579 | -107 | 4 | TTGACGGATATCAT |
Position: -147
Score: 3.6 Sequence: TCGCGCTAGATCAA
Locus tag: Ent638_1221
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Ent638_1221 | -147 | 3.6 | TCGCGCTAGATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: gltA | ||||
Ortholog function: Citrate synthase (EC 2.3.3.1) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02439 | -67 | 3.8 | TTGATTTATGTAAC |
Enterobacter sp. 638 | Ent638_1221 | -147 | 3.6 | TCGCGCTAGATCAA |
Erwinia amylovora ATCC 49946 | EAM_1167 | -171 | 3.7 | ATGATACTCATCAG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4121 | -185 | 4.8 | TTTATCTAAATCAA |
Escherichia coli str. K-12 substr. MG1655 | b0720 | -173 | 3.6 | TTATTCGTCATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00489 | 28 | 3.6 | TTGCCGGACAACAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1425 | -110 | 3.6 | TTGATGACAAAGAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3138 | -56 | 3.8 | CCTATTTAAATCAA |
Salmonella typhimurium LT2 | STM0730 | -213 | 3.9 | TCGAAATTAATCAA |
Position: -340
Score: 4 Sequence: TTAATCTTTGTCAA
Locus tag: Ent638_1222
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Ent638_1222 | -340 | 4 | TTAATCTTTGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sdhC | ||||
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02438 | 25 | 3.6 | ATGTGAAAAAACAA |
Edwardsiella tarda EIB202 | ETAE_2588 | 10 | 4 | |
Escherichia coli str. K-12 substr. MG1655 | b0721 | 10 | 3.6 | ATGTGAAAAAACAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00728 | -104 | 3.6 | ATGTGAAAAAACAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1426 | -127 | 4 | TTGTGAAAAAACAA |
Proteus mirabilis HI4320 | PMI0565 | -2 | 4 | TTGTGAAAAAACAA |
Salmonella typhimurium LT2 | STM0732 | 10 | 3.6 | ATGTGAAAAAACAA |
Serratia proteamaculans 568 | Spro_1263 | -249 | 4.1 | GTGATCTAAATCAC |
Yersinia pestis KIM | y3071 | -224 | 3.8 | ATGTTATCAATCAG |
Position: -90
Score: 4.5 Sequence: TTGATATACGTCAT
Locus tag: Ent638_1272
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Ent638_1272 | -90 | 4.5 | TTGATATACGTCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ybhK | ||||
Ortholog function: Predicted transferase, NAD(P)-binding | ||||
Edwardsiella tarda EIB202 | ETAE_2348 | -92 | 3.9 | TTGATACATGTCAC |
Enterobacter sp. 638 | Ent638_1272 | -90 | 4.5 | TTGATATACGTCAT |
Erwinia amylovora ATCC 49946 | EAM_1217 | -88 | 4 | TTGATATATAGCGA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2818 | -117 | 3.7 | ATGAGCTTACTCAA |
Escherichia coli str. K-12 substr. MG1655 | b0780 | -147 | 4.8 | TTGATATACATCAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00809 | -91 | 4 | TTGATGTCGGTCAG |
Salmonella typhimurium LT2 | STM0801 | -146 | 4.8 | TTGATATATATCAT |
Yersinia pestis KIM | y3024 | -190 | 4.2 | TTGTTTAAAATCAC |
Position: -236
Score: 4.4 Sequence: ATGACGTATATCAA
Locus tag: Ent638_1273
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Ent638_1273 | -236 | 4.4 | ATGACGTATATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: moaA | ||||
Ortholog function: Molybdenum cofactor biosynthesis protein MoaA | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02345 | -253 | 4.7 | CTGATGTATATCAA |
Edwardsiella tarda EIB202 | ETAE_2347 | -380 | 3.9 | GTGACATGTATCAA |
Enterobacter sp. 638 | Ent638_1273 | -236 | 4.4 | ATGACGTATATCAA |
Erwinia amylovora ATCC 49946 | EAM_1218 | -212 | 4.2 | TCGCTATATATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2817 | -321 | 3.5 | ATGACCTGAGACAA |
Escherichia coli str. K-12 substr. MG1655 | b0781 | -263 | 4.9 | ATGATGTATATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00810 | -257 | 4 | CTGACCGACATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1499 | -155 | 3.7 | TCGTTTTACATTAA |
Salmonella typhimurium LT2 | STM0802 | -264 | 5 | ATGATATATATCAA |
Serratia proteamaculans 568 | Spro_1320 | -312 | 3.7 | GTGATTCCGGTCAA |
Yersinia pestis KIM | y3023 | -310 | 4.3 | GTGATTTTAAACAA |
Position: -68
Score: 4.4 Sequence: TTGACGCACATCAA
Locus tag: Ent638_1318
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Ent638_1318 | -68 | 4.4 | TTGACGCACATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ybiY | ||||
Ortholog function: Pyruvate formate-lyase activating enzyme (EC 1.97.1.4) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02286 | -70 | 4.1 | TTGACCTGCGTCAA |
Edwardsiella tarda EIB202 | ETAE_0451 | -71 | 5.2 | TTGATCAAAATCAA |
Enterobacter sp. 638 | Ent638_1318 | -68 | 4.4 | TTGACGCACATCAA |
Escherichia coli str. K-12 substr. MG1655 | b0824 | -67 | 4.4 | TTGACGCACATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00858 | -69 | 4.7 | TTGATTTGCGTCAA |
Salmonella typhimurium LT2 | STM0844 | -69 | 4.4 | TTGACGCACATCAA |
Serratia proteamaculans 568 | Spro_2641 | -76 | 5.1 | TTGATCGAAATCAA |
Position: -155
Score: 3.3 Sequence: TCTATAAATATCAT
Locus tag: Ent638_1321
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Ent638_1321 | -155 | 3.3 | TCTATAAATATCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: moeA | ||||
Ortholog function: Molybdopterin biosynthesis protein MoeA | ||||
Edwardsiella tarda EIB202 | ETAE_1153 | -335 | 3.8 | ATGATACAGATCAC |
Enterobacter sp. 638 | Ent638_1321 | -155 | 3.3 | TCTATAAATATCAT |
Erwinia amylovora ATCC 49946 | EAM_1284 | -244 | 3.5 | CTGTGATAAATCAG |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2836 | -383 | 3.7 | ATGATGTAAAGCAG |
Escherichia coli str. K-12 substr. MG1655 | b0827 | 18 | 3.7 | TTGATGTCGCTCGA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1540 | -244 | 3.9 | TTGACAGTGGTCAA |
Proteus mirabilis HI4320 | PMI0637 | -182 | 3.7 | TTAAAATACAACAA |
Yersinia pestis KIM | y2673 | -202 | 3.8 | TTGATATATATATA |
Position: -110
Score: 4.4 Sequence: TTGCGCTAAATCAA
Locus tag: Ent638_1390
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Ent638_1390 | -110 | 4.4 | TTGCGCTAAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: hcp | ||||
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02206 | -76 | 4.4 | TTGCGCTAAATCAA |
Enterobacter sp. 638 | Ent638_1390 | -110 | 4.4 | TTGCGCTAAATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00907 | -76 | 4.4 | TTGCGCTAAATCAA |
Position: -3
Score: 3.8 Sequence: TCTATGAAAATCAA
Locus tag: Ent638_1418
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Ent638_1418 | -3 | 3.8 | TCTATGAAAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dmsA | ||||
Ortholog function: Anaerobic dimethyl sulfoxide reductase chain A (EC 1.8.99.-) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02177 | -117 | 3.6 | CTGATTTTTCTCAT |
Enterobacter sp. 638 | Ent638_1418 | -3 | 3.8 | TCTATGAAAATCAA |
Escherichia coli str. K-12 substr. MG1655 | b0894 | -184 | 4.3 | TTGATACCGAACAA |
Salmonella typhimurium LT2 | STM0964 | -96 | 4.2 | |
Yersinia pestis KIM | y0864 | -199 | 4.2 | TTGATTCCAGACAA |
Position: -74
Score: 4.9 Sequence: ATGATCTATATCAA
Locus tag: Ent638_1424
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Ent638_1424 | -74 | 4.9 | ATGATCTATATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: focA | ||||
Ortholog function: Formate efflux transporter (TC 2.A.44 family) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02167 | -116 | 4.9 | ATGATCTATATCAA |
Edwardsiella tarda EIB202 | ETAE_2181 | -117 | 4.2 | ATGATCCATGTCAA |
Enterobacter sp. 638 | Ent638_1424 | -74 | 4.9 | ATGATCTATATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2596 | -228 | 4 | ATGATTTTTATTAA |
-75 | 4.5 | ATGATCCACATCAA | ||
Escherichia coli str. K-12 substr. MG1655 | b0904 | -74 | 4.9 | ATGATCTATATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00932 | -117 | 4.9 | ATGATCTATATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu1614 | -267 | 4.1 | TTTATTTGCAACAA |
-159 | 4.7 | TTTATTAAAATCAA | ||
-84 | 4.9 | ATGATCTATATCAA | ||
Proteus mirabilis HI4320 | PMI0706 | -159 | 4.1 | TTATTATTAATCAA |
-85 | 4.5 | ATGATCCATATCAA | ||
Salmonella typhimurium LT2 | STM0974 | -74 | 4.9 | ATGATCTATATCAA |
Serratia proteamaculans 568 | Spro_1703 | -143 | 3.9 | ATAATTTAACTCAA |
-81 | 4.6 | ATGATCCAAATCAA | ||
Yersinia pestis KIM | y2789 | -80 | 4.5 | ATGATCCATATCAA |
Position: -181
Score: 3.5 Sequence: TTGACCTGAGGCAA
Locus tag: Ent638_1456
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Ent638_1456 | -181 | 3.5 | TTGACCTGAGGCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ssuE | ||||
Ortholog function: FMN reductase (EC 1.5.1.29) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_02124 | -43 | 3.7 | TTAATGAAAATCGA |
Enterobacter sp. 638 | Ent638_1456 | -181 | 3.5 | TTGACCTGAGGCAA |
Escherichia coli str. K-12 substr. MG1655 | b0937 | -278 | 3.6 | GCCATTTAAATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00973 | -182 | 3.8 | TTGACCTGCGACAA |
Serratia proteamaculans 568 | Spro_1739 | -256 | 4.6 | TTGATTAAAAGCAA |
Yersinia pestis KIM | y0246 | -252 | 3.7 | GTGATCTGGCTCAA |
Position: -149
Score: 5 Sequence: TTGATTCATATCAA
Locus tag: Ent638_1624
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Ent638_1624 | -149 | 5 | TTGATTCATATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ndh | ||||
Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01946 | -163 | 5.2 | TTGATGTACATCAA |
Edwardsiella tarda EIB202 | ETAE_2070 | -162 | 5.1 | TTGATTTGAATCAA |
Enterobacter sp. 638 | Ent638_1624 | -149 | 5.1 | TTGATTCATATCAA |
Erwinia amylovora ATCC 49946 | EAM_1473 | -146 | 4.2 | TTGACCAGCATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1815 | -149 | 5.4 | TTGATATATATCAA |
Escherichia coli str. K-12 substr. MG1655 | b1109 | -150 | 5.2 | TTGATTAACATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01106 | -148 | 4.8 | TTGATGCACATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2821 | -150 | 4.2 | TTGATGTTGTTCAA |
Proteus mirabilis HI4320 | PMI0875 | -153 | 5.5 | TTGATATAAATCAA |
Salmonella typhimurium LT2 | STM1211 | -150 | 4.8 | TTGATGCACATCAA |
Serratia proteamaculans 568 | Spro_1926 | -149 | 5.2 | TTGATGTACATCAA |
Yersinia pestis KIM | y1777 | -148 | 5.4 | TTGATATATATCAA |
Position: -85
Score: 3.5 Sequence: TTGATCCAGCACAG
Locus tag: Ent638_1834
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Ent638_1834 | -85 | 3.5 | TTGATCCAGCACAG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: nikA | ||||
Ortholog function: Nickel ABC transporter, periplasmic nickel-binding protein NikA (TC 3.A.1.5.3) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04926 | -228 | 3.8 | TTGATCCAGAACAC |
Edwardsiella tarda EIB202 | ETAE_1379 | -80 | 3.4 | TTGATCCATCACAC |
Enterobacter sp. 638 | Ent638_1834 | -85 | 3.5 | TTGATCCAGCACAG |
Escherichia coli str. K-12 substr. MG1655 | b3476 | -86 | 4 | TTGATCCAGAACAG |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03850 | -6 | 4 | TTGATTATGCACAA |
Position: -33
Score: 4.6 Sequence: TTGACCAATATCAA
Locus tag: Ent638_1853
|
||||
Ent638_1853 | -33 | 4.6 | TTGACCAATATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: fnr | ||||
Ortholog function: Fumarate and nitrate reduction regulatory protein | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01409 | -83 | 3.8 | TTGATGTAAAGTAA |
Edwardsiella tarda EIB202 | ETAE_1744 | -133 | 3.4 | GTGCTATACATCAC |
-33 | 4.6 | TTGACCGATATCAA | ||
Enterobacter sp. 638 | Ent638_1853 | -33 | 4.6 | TTGACCAATATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2207 | -34 | 4.6 | TTGACCAATATCAA |
Escherichia coli str. K-12 substr. MG1655 | b1334 | -33 | 4.7 | TTGACAAATATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01530 | -327 | 4.6 | TTGACCAATATCAA |
-185 | 3.5 | ATGAGCTTGATCAG | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu2179 | -35 | 3.4 | TTGAAGGATATGAA |
Proteus mirabilis HI4320 | PMI1203 | -40 | 4.5 | TTGACACATATCAA |
Salmonella typhimurium LT2 | STM1660.S | -33 | 4.7 | TTGACAAATATCAA |
Serratia proteamaculans 568 | Spro_2582 | -34 | 4.4 | TTGACGCATATCAA |
Yersinia pestis KIM | y2132 | -32 | 4.4 | TTGACGCATATCAA |
Position: -107
Score: 3.6 Sequence: TTGATGGGGATTAA
Locus tag: Ent638_1925
|
||||
Ent638_1925 | -107 | 3.6 | TTGATGGGGATTAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ynfI | ||||
Ortholog function: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01585 | -32 | 4.3 | |
Enterobacter sp. 638 | Ent638_1925 | -107 | 3.7 | TTGATGGGGATTAA |
Escherichia coli str. K-12 substr. MG1655 | b1591 | -113 | 4.1 | TTGATATGGATTAA |
Salmonella typhimurium LT2 | STM1495 | -116 | 3.7 | TTGACATGGATTAA |
Serratia proteamaculans 568 | Spro_1690 | -164 | 4.2 | TTGATAGCAGACAA |
-40 | 4.2 | ATGACGTTTATCAA | ||
Position: -77
Score: 3.9 Sequence: TTGATTTGACGCAA
Locus tag: Ent638_2055
|
||||
Ent638_2055 | -77 | 3.9 | TTGATTTGACGCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: fdnG | ||||
Ortholog function: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing | ||||
Enterobacter sp. 638 | Ent638_2055 | -77 | 3.9 | TTGATTTGACGCAA |
Enterobacter sp. 638 | Ent638_2054 | -77 | 3.9 | TTGATTTGACGCAA |
Escherichia coli str. K-12 substr. MG1655 | b1474 | -133 | 4.4 | TTGAGGTAGGTCAA |
Salmonella typhimurium LT2 | STM1570 | -126 | 3.9 | TTGATTTGACGCAA |
Position: -135
Score: 4.6 Sequence: TTGTTTTATCTCAA
Locus tag: Ent638_2192
|
||||
Ent638_2192 | -135 | 4.6 | TTGTTTTATCTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: acnA | ||||
Ortholog function: Aconitate hydratase (EC 4.2.1.3); 2-methylisocitrate dehydratase (EC 4.2.1.99) | ||||
Enterobacter sp. 638 | Ent638_2192 | -135 | 4.6 | TTGTTTTATCTCAA |
Erwinia amylovora ATCC 49946 | EAM_1866 | 37 | 4.4 | TGGATGTAAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1941 | -98 | 3.7 | ATGAGCTTACTCAA |
Escherichia coli str. K-12 substr. MG1655 | b1276 | -133 | 3.7 | TTGCTTTGCCACAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2432 | 7 | 4.6 | TTGATTTAAAAAAA |
Salmonella typhimurium LT2 | STM1712 | -301 | 3.9 | TTGATTAAACACAG |
Yersinia pestis KIM | y2063 | -37 | 3.9 | TTGAATTAAAACAC |
Position: -117
Score: 4.1 Sequence: TTAATCTGGATCAA
Locus tag: Ent638_2283
|
||||
Ent638_2283 | -117 | 4.1 | TTAATCTGGATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ompW | ||||
Ortholog function: outer membrane protein W; colicin S4 receptor; putative transporter | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01333 | -117 | 4.1 | TTAATCTGGATCAA |
Edwardsiella tarda EIB202 | ETAE_1528 | -157 | 4.9 | TTGATGTCTATCAA |
Enterobacter sp. 638 | Ent638_2283 | -117 | 4.1 | TTAATCTGGATCAA |
Erwinia amylovora ATCC 49946 | EAM_1884 | -160 | 5.4 | TTGATCTAAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2303 | -160 | 4.8 | TTGATCTGGATCAA |
Escherichia coli str. K-12 substr. MG1655 | b1256 | -162 | 4.8 | TTGATTTAAATCAC |
-117 | 4.1 | TTAATCCAGATCAA | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01248 | -247 | 4.2 | TTGATTTCACTCAT |
-80 | 4.1 | TTAATCTGGATCAA | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu2478 | -160 | 5 | TTGATTTGGATCAA |
Proteus mirabilis HI4320 | PMI1350 | -164 | 4.8 | TTGATGTGGATCAA |
Salmonella typhimurium LT2 | STM1732 | -117 | 4.1 | TTAATCTGGATCAA |
Serratia proteamaculans 568 | Spro_2674 | -131 | 5 | TTGATTCAGATCAA |
Yersinia pestis KIM | y2044 | -171 | 3.6 | ATGATAAATGGCAA |
-147 | 4.4 | ATGATCCAGATCAA | ||
Position: -249
Score: 4.5 Sequence: TTGATTCAGATCAT
Locus tag: Ent638_2304
|
||||
Ent638_2304 | -249 | 4.5 | TTGATTCAGATCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: adhE | ||||
Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01318 | -238 | 4.1 | TTGATCTGGATCAC |
Enterobacter sp. 638 | Ent638_2304 | -249 | 4.5 | TTGATTCAGATCAT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -311 | 3.6 | TCGATGTTGATCAC |
-305 | 3.8 | TTGATCACAAAAAA | ||
Escherichia coli str. K-12 substr. MG1655 | b1241 | -237 | 4.3 | TTGATTTGGATCAC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -233 | 4.7 | TTGATCTAAATCAC |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -134 | 4.5 | GTGATTAAGATCAA |
Proteus mirabilis HI4320 | PMI1486 | -242 | 3.8 | GTGATGTAGATCAC |
Salmonella typhimurium LT2 | STM1749 | -238 | 4.7 | TTGATTTAGATCAC |
Serratia proteamaculans 568 | Spro_2704 | -274 | 4.4 | ATGATTTAAATCAC |
Position: -100
Score: 4.7 Sequence: TTGATCGTTATCAA
Locus tag: Ent638_2315
|
||||
Ent638_2315 | -100 | 4.7 | TTGATCGTTATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: narG | ||||
Ortholog function: Respiratory nitrate reductase alpha chain (EC 1.7.99.4) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_01301 | -105 | 4.7 | TTGATCGTTATCAA |
Enterobacter sp. 638 | Ent638_2315 | -100 | 4.7 | TTGATCGTTATCAA |
Escherichia coli str. K-12 substr. MG1655 | b1224 | -105 | 4.7 | TTGATCGTTATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02214 | -106 | 4.6 | TTGATCGCTATCAA |
Salmonella typhimurium LT2 | STM1764 | -105 | 4.7 | TTGATCGTTATCAA |
Position: -251
Score: 5.4 Sequence: TTGATATAAATCAA
Locus tag: Ent638_2317
|
||||
Ent638_2317 | -251 | 5.4 | TTGATATAAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: narX | ||||
Ortholog function: Nitrate/nitrite sensor protein NarX (EC 2.7.3.-) | ||||
Enterobacter sp. 638 | Ent638_2317 | -251 | 5.5 | TTGATATAAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2029 | -268 | 4.9 | TTGATGCAAATCAA |
Escherichia coli str. K-12 substr. MG1655 | b1222 | -279 | 5.4 | TTGATGTAAATCAA |
-241 | 4.6 | TTGATATTTATCAT | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02216 | -251 | 5.5 | TTGATATAAATCAA |
Proteus mirabilis HI4320 | PMI3569 | -235 | 4.5 | ATGATCTGCATCAA |
Salmonella typhimurium LT2 | STM1766 | -281 | 5.5 | TTGATATAAATCAA |
Serratia proteamaculans 568 | Spro_2899 | -301 | 5.4 | TTGATGTAAATCAA |
Position: -82
Score: 4.3 Sequence: TTGTCTTAAATCAT
Locus tag: Ent638_2338
|
||||
Ent638_2338 | -82 | 4.3 | TTGTCTTAAATCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: hemA | ||||
Ortholog function: Glutamyl-tRNA reductase (EC 1.2.1.70) | ||||
Enterobacter sp. 638 | Ent638_2338 | -82 | 4.3 | TTGTCTTAAATCAT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2189 | -134 | 4.8 | |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02235 | -143 | 4.4 | TTGTCTGAAATCAA |
Salmonella typhimurium LT2 | STM1777 | -131 | 4.3 | TTGTCTTAAATCAT |
Position: -93
Score: 3.6 Sequence: TTGAATTTATACAA
Position: 0
Score: 3.6 Sequence: ATGATCACCATCGA
Position: 15
Score: 3.5 Sequence: TTTATAGTCATCAT
Locus tag: Ent638_2479
|
||||
Ent638_2479 | -93 | 3.6 | TTGAATTTATACAA | |
0 | 3.6 | ATGATCACCATCGA | ||
15 | 3.5 | TTTATAGTCATCAT | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dcuB | ||||
Ortholog function: C4-dicarboxylate transporter DcuB | ||||
Edwardsiella tarda EIB202 | ETAE_2844 | -271 | 3.4 | TTATTTTTTATTAA |
Enterobacter sp. 638 | Ent638_2479 | -93 | 3.6 | TTGAATTTATACAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1533 | -279 | 3.7 | TTTATTTTCATGAA |
-243 | 4.5 | TAGATTTAGATCAA | ||
Escherichia coli str. K-12 substr. MG1655 | b4123 | -283 | 4 | CCGATAAATATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04367 | -210 | 3.4 | TCTACTCATATCAA |
Proteus mirabilis HI4320 | PMI0389 | -78 | 3.4 | TTGTTTTTTTGCAA |
Salmonella typhimurium LT2 | STM4301 | -72 | 3.5 | TTCACAAAAATCAG |
Serratia proteamaculans 568 | Spro_3863 | -189 | 3.8 | CAGATTAAAATCAA |
Yersinia pestis KIM | y0901 | -239 | 3.4 | TTAATTTAAAGCAC |
Position: -122
Score: 3.7 Sequence: TTTATATAGGTCAC
Locus tag: Ent638_2555
|
||||
Ent638_2555 | -122 | 3.7 | TTTATATAGGTCAC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: dcuS | ||||
Ortholog function: Fumarate respiration sensor kinase protein DcuS | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03745 | -199 | 3.3 | GTGATCCCCATCAG |
Enterobacter sp. 638 | Ent638_2555 | -122 | 3.7 | TTTATATAGGTCAC |
Erwinia amylovora ATCC 49946 | EAM_1542 | -115 | 3.4 | TTGCTTAAGATCGT |
Escherichia coli str. K-12 substr. MG1655 | b4125 | -311 | 3.6 | TTGAGATTAAATAA |
Salmonella typhimurium LT2 | STM4304 | -274 | 4.8 | TTGATTGTGATCAA |
-177 | 3.9 | CTGATGAAAATAAA | ||
Serratia proteamaculans 568 | Spro_1959 | -188 | 3.3 | TTAATGGCTATCAT |
Position: -112
Score: 3.7 Sequence: GTGACATAGATCAG
Locus tag: Ent638_2642
|
||||
Ent638_2642 | -112 | 3.7 | GTGACATAGATCAG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: gnd | ||||
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00756 | -337 | 4 | TTGATTACTATCTA |
Enterobacter sp. 638 | Ent638_2642 | -112 | 3.7 | GTGACATAGATCAG |
Erwinia amylovora ATCC 49946 | EAM_2150 | -264 | 3.8 | TTCTCTTAAGTCAA |
-169 | 4 | TTTTTTTTAAACAA | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1444 | -228 | 3.3 | TTGAGTGGTAACAT |
Escherichia coli str. K-12 substr. MG1655 | b2029 | -375 | 3.4 | ATGGCTTCGATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02499 | -322 | 3.7 | TTTTTATAGTTCAA |
Proteus mirabilis HI4320 | PMI0655 | -7 | 3.7 | TTATTTCATGTCAA |
Serratia proteamaculans 568 | Spro_1608 | -384 | 3.3 | ATTATTTGAATTAA |
Position: -197
Score: 4.2 Sequence: TTGATTTCGAACAT
Locus tag: Ent638_2804
|
||||
Ent638_2804 | -197 | 4.2 | TTGATTTCGAACAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glpT | ||||
Ortholog function: Glycerol-3-phosphate transporter | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00537 | -257 | 3.7 | TCGTTTTTTATCAT |
Edwardsiella tarda EIB202 | ETAE_3116 | -301 | 3.8 | GTGATCAAAATCAC |
Enterobacter sp. 638 | Ent638_2804 | -197 | 4.2 | TTGATTTCGAACAT |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4166 | -249 | 4.3 | TTGATAAAGAGCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02646 | -214 | 3.8 | TTGATTTCGAGCAT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4119 | -306 | 4.2 | TTGATAAAGAACAG |
Proteus mirabilis HI4320 | PMI3591 | -287 | 4 | TTGATAATGAGCAA |
-45 | 4.9 | TTGTTTAATATCAA | ||
Salmonella typhimurium LT2 | STM2283 | -256 | 3.7 | TCGTTTTTTATCAT |
Serratia proteamaculans 568 | Spro_0199 | -305 | 4.3 | TTGATAAGGAACAA |
Position: -164
Score: 3.7 Sequence: TTACTGTGAATCAA
Position: -69
Score: 4.3 Sequence: ATGTTCGAAATCAA
Position: -65
Score: 3.5 Sequence: TCGAAATCAAACAA
Locus tag: Ent638_2805
|
||||
Ent638_2805 | -164 | 3.7 | TTACTGTGAATCAA | |
-69 | 4.3 | ATGTTCGAAATCAA | ||
-65 | 3.5 | TCGAAATCAAACAA | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glpA | ||||
Ortholog function: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00536 | -30 | 3.8 | ATGATAAAAAACGA |
Edwardsiella tarda EIB202 | ETAE_3115 | -78 | 4.1 | TTGCTCCTTATCAA |
Enterobacter sp. 638 | Ent638_2805 | -69 | 4.3 | ATGTTCGAAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4165 | -84 | 4.5 | TTGCTCTTTATCAA |
Escherichia coli str. K-12 substr. MG1655 | b2241 | -71 | 3.6 | ATGCGCGAAATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02647 | -71 | 4.1 | ATGCTCGAAATCAA |
Proteus mirabilis HI4320 | PMI3592 | -107 | 4.2 | TTGCTCATTATCAA |
Salmonella typhimurium LT2 | STM2284 | -30 | 3.8 | ATGATAAAAAACGA |
Serratia proteamaculans 568 | Spro_0200 | -74 | 4.3 | TTGTTCCTTATCAA |
Yersinia pestis KIM | y0404 | -145 | 4.3 | TTGATCACAATCAT |
-91 | 4.4 | TTGTTTCTTATCAA | ||
Position: -92
Score: 4.1 Sequence: ATGATGTTAATCAT
Locus tag: Ent638_2840
|
||||
Ent638_2840 | -92 | 4.1 | ATGATGTTAATCAT | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ackA | ||||
Ortholog function: Acetate kinase (EC 2.7.2.1) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00498 | -92 | 4.1 | ATGATGTTAATCAT |
Edwardsiella tarda EIB202 | ETAE_2397 | -93 | 4.1 | ATGATGTTAATCAT |
Enterobacter sp. 638 | Ent638_2840 | -92 | 4.1 | ATGATGTTAATCAT |
Erwinia amylovora ATCC 49946 | EAM_2301 | -119 | 3.9 | TTGCTTTCGGACAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3039 | -91 | 4.1 | ATGATGTTAATCAT |
Escherichia coli str. K-12 substr. MG1655 | b2296 | -92 | 4.1 | ATGATGTTAATCAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02687 | -91 | 4.1 | ATGATGTTAATCAT |
Photorhabdus luminescens subsp. laumondii TTO1 | plu3095 | -117 | 4.1 | ATGATGTTAATCAT |
Proteus mirabilis HI4320 | PMI1771 | -165 | 3.7 | TTGATGATTGGCAA |
Salmonella typhimurium LT2 | STM2337 | -92 | 4.1 | ATGATGTTAATCAT |
Serratia proteamaculans 568 | Spro_3316 | -121 | 4.1 | ATGATGTTAATCAT |
Yersinia pestis KIM | y1622 | -163 | 4.1 | ATGATGTTAATCAT |
Position: -97
Score: 4.4 Sequence: TTGATCACCGTCAA
Locus tag: Ent638_2986
|
||||
Ent638_2986 | -97 | 4.4 | TTGATCACCGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: upp | ||||
Ortholog function: Uracil phosphoribosyltransferase (EC 2.4.2.9) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00293 | -103 | 4.6 | TTGATCCATGTCAA |
Edwardsiella tarda EIB202 | ETAE_1087 | -97 | 4.5 | TTGATTGAGATCAT |
Enterobacter sp. 638 | Ent638_2986 | -97 | 4.4 | TTGATCACCGTCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1255 | -169 | 4.3 | TTGATCTGGATCAG |
Escherichia coli str. K-12 substr. MG1655 | b2498 | -95 | 4.6 | TTGACTAAAGTCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02821 | -96 | 5 | TTGATATACGTCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu2759 | -103 | 5.1 | TTGATGAAAATCAA |
Proteus mirabilis HI4320 | PMI1574 | -97 | 5.1 | TTGATCAATATCAA |
Salmonella typhimurium LT2 | STM2498 | -103 | 4.6 | TTGATCCAGGTCAA |
Yersinia pestis KIM | y1408 | -98 | 4.4 | TTGATCTGAATCAG |
Position: -147
Score: 5.2 Sequence: TTGATTTAAGTCAA
Locus tag: Ent638_2992
|
||||
Ent638_2992 | -147 | 5.2 | TTGATTTAAGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yfgF | ||||
Ortholog function: Predicted cytochrome C-type biogenesis protein | ||||
Enterobacter sp. 638 | Ent638_2992 | -147 | 5.2 | TTGATTTAAGTCAA |
Position: -172
Score: 5.1 Sequence: TTGATATAAAACAA
Position: -120
Score: 5.1 Sequence: TTGATTTAGGTCAA
Locus tag: Ent638_3064
|
||||
Ent638_3064 | -172 | 5.1 | TTGATATAAAACAA | |
-120 | 5.1 | TTGATTTAGGTCAA | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yfiD | ||||
Ortholog function: Stress-induced alternate pyruvate formate-lyase subunit | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00205 | -176 | 5.1 | |
-123 | 5.6 | |||
Enterobacter sp. 638 | Ent638_3064 | -172 | 5.2 | |
-120 | 5.1 | |||
Salmonella typhimurium LT2 | STM2646 | -177 | 5.1 | |
-124 | 5.6 | |||
Position: -194
Score: 5 Sequence: TTGACCTAAATCAA
Position: -142
Score: 5.1 Sequence: TTGTTTTATATCAA
Position: 34
Score: 4.2 Sequence: CTGATGAAAAACAA
Locus tag: Ent638_3065
|
||||
Ent638_3065 | -194 | 5 | TTGACCTAAATCAA | |
-142 | 5.1 | TTGTTTTATATCAA | ||
34 | 4.2 | CTGATGAAAAACAA | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ung | ||||
Ortholog function: Uracil-DNA glycosylase (EC 3.2.2.27) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00204 | -209 | 5.6 | TTGATTTAAATCAA |
-156 | 5.1 | TTGTTTTACATCAA | ||
Edwardsiella tarda EIB202 | ETAE_2734 | -396 | 4.1 | TTGAGATAGAGCAA |
-280 | 5.4 | TTGATCTAAATCAA | ||
-227 | 4.7 | ATGTTTTACATCAA | ||
Enterobacter sp. 638 | Ent638_3065 | -194 | 5 | TTGACCTAAATCAA |
-142 | 5.1 | TTGTTTTATATCAA | ||
34 | 4.2 | CTGATGAAAAACAA | ||
Erwinia amylovora ATCC 49946 | EAM_2526 | -177 | 4.9 | TTGATGCAAATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3289 | -228 | 5.1 | TTGACTTAAATCAA |
-175 | 5.1 | TTGTTTTATATCAA | ||
Escherichia coli str. K-12 substr. MG1655 | b2580 | -197 | 5.6 | TTGATTTAAATCAA |
-144 | 5.1 | TTGTTTTACATCAA | ||
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02903 | -206 | 5.5 | TTGATATAAATCAA |
-153 | 5.1 | TTGTTTTACATCAA | ||
Photorhabdus luminescens subsp. laumondii TTO1 | plu3371 | -233 | 4.1 | TTGATTCAGAACAG |
Proteus mirabilis HI4320 | PMI1899 | -221 | 5.1 | TTGATAAATATCAA |
-168 | 5.2 | TTGTTTTAAATCAA | ||
Salmonella typhimurium LT2 | STM2647 | -208 | 5.6 | TTGATTTAAATCAA |
-155 | 5.1 | TTGTTTTACATCAA | ||
Serratia proteamaculans 568 | Spro_3683 | -222 | 5 | TTGATTAAAGTCAA |
-169 | 4.4 | ATGTTTTATGTCAA | ||
Yersinia pestis KIM | y1281 | -213 | 5.2 | TTGATTCAAATCAA |
-160 | 4.7 | ATGTTTTATATCAA | ||
Position: 3
Score: 4 Sequence: TTTACCTTTATCAA
Locus tag: Ent638_3193
|
||||
Ent638_3193 | 3 | 4 | TTTACCTTTATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: hyfH | ||||
Ortholog function: Hydrogenase-4 component H (EC 1.-.-.-) | ||||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1240 | -91 | 3.5 | TTGAATTAAAGAAA |
Escherichia coli str. K-12 substr. MG1655 | b2488 | -29 | 3.8 | ATGTTTCATATCAT |
Proteus mirabilis HI4320 | PMI2521 | -114 | 4.9 | TTGATTTTTAACAA |
Position: 19
Score: 4.1 Sequence: TTTATAAAGGTCAA
Locus tag: Ent638_3376
|
||||
Ent638_3376 | 19 | 4.1 | TTTATAAAGGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ycgM | ||||
Ortholog function: Fumarylacetoacetate hydrolase family protein | ||||
Enterobacter sp. 638 | Ent638_3376 | 19 | 4.1 | TTTATAAAGGTCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2575 | -93 | 3.8 | TTGAGCCAAATAAA |
Position: 0
Score: 3.7 Sequence: ATGCAATACATCAA
Locus tag: Ent638_3545
|
||||
Ent638_3545 | 0 | 3.7 | ATGCAATACATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uxaA | ||||
Ortholog function: Altronate hydrolase (EC 4.2.1.7) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04493 | -43 | 3.8 | TTGATCCAACTCAC |
Enterobacter sp. 638 | Ent638_3545 | -105 | 4.2 | TTGATCTAACTCAC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0647 | -225 | 3.9 | TTGAGTGATATCAC |
Escherichia coli str. K-12 substr. MG1655 | b3091 | -106 | 4.2 | TTGATCTAACTCAC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03519 | -125 | 4.2 | TTGATCTAACTCAC |
Serratia proteamaculans 568 | Spro_4320 | -227 | 3.9 | TTGAGTGATATCAC |
Yersinia pestis KIM | y3598 | -225 | 3.8 | TTGAGTGACATCAC |
Position: -105
Score: 4.2 Sequence: TTGATCTAACTCAC
Locus tag: Ent638_3546
|
||||
Ent638_3546 | -105 | 4.2 | TTGATCTAACTCAC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: uxaC | ||||
Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04494 | -43 | 3.8 | TTGATCCAACTCAC |
Enterobacter sp. 638 | Ent638_3546 | -105 | 4.2 | TTGATCTAACTCAC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0645 | -225 | 3.9 | TTGAGTGATATCAC |
Escherichia coli str. K-12 substr. MG1655 | b3092 | -106 | 4.2 | TTGATCTAACTCAC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03520 | -125 | 4.2 | TTGATCTAACTCAC |
Position: -184
Score: 4.5 Sequence: TTGATCAATATCAG
Locus tag: Ent638_3565
|
||||
Ent638_3565 | -184 | 4.5 | TTGATCAATATCAG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: tdcA | ||||
Ortholog function: Threonine catabolism transcriptional regulator TdcA, LysR family | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04518 | -183 | 4.2 | TTGACAAAAATCAT |
Edwardsiella tarda EIB202 | ETAE_0893 | -131 | 3.8 | TTGCTCTTTATAAA |
Enterobacter sp. 638 | Ent638_3565 | -184 | 4.5 | TTGATCAATATCAG |
Escherichia coli str. K-12 substr. MG1655 | b3118 | -183 | 4.2 | TTGACAAAAATCAG |
Salmonella typhimurium LT2 | STM3245 | -184 | 4.7 | TTGATTGAAATCAG |
Position: -65
Score: 3.7 Sequence: TTTATTCAAATGAA
Position: -32
Score: 4 Sequence: TTGATCCAGGTCAT
Locus tag: Ent638_3655
|
||||
Ent638_3655 | -65 | 3.7 | TTTATTCAAATGAA | |
-32 | 4 | TTGATCCAGGTCAT | ||
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: yhcC | ||||
Ortholog function: COG1242: Predicted Fe-S oxidoreductase | ||||
Enterobacter sp. 638 | Ent638_3655 | -65 | 3.7 | TTTATTCAAATGAA |
-32 | 4 | TTGATCCAGGTCAT | ||
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0313 | -70 | 3.7 | TTGATCGCGGTCAT |
Escherichia coli str. K-12 substr. MG1655 | b3211 | -75 | 4 | TTGATCCAGGTCAT |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03623 | -75 | 4 | TTGATCCAGGTCAT |
Salmonella typhimurium LT2 | STM3329 | -75 | 4 | TTGATCCAGGTCAT |
Serratia proteamaculans 568 | Spro_4343 | -74 | 4.2 | TTGATCTCTGTCAT |
Yersinia pestis KIM | y0127 | -133 | 4.2 | TTGATCTCTGTCAT |
Position: -72
Score: 5 Sequence: TTGATTTGCATCAA
Locus tag: Ent638_3793
|
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Ent638_3793 | -72 | 5 | TTGATTTGCATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: nirB | ||||
Ortholog function: Nitrite reductase, large subunit (EC 1.7.1.4) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04789 | -72 | 5.4 | TTGATTTACATCAA |
Enterobacter sp. 638 | Ent638_3793 | -72 | 5 | TTGATTTGCATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4079 | -71 | 5.3 | TTGATATACATCAA |
Escherichia coli str. K-12 substr. MG1655 | b3365 | -72 | 5.4 | TTGATTTACATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03752 | -72 | 5 | TTGATTTGCATCAA |
Proteus mirabilis HI4320 | PMI1479 | -72 | 5.1 | TTGATATTCATCAA |
Salmonella typhimurium LT2 | STM3474 | -72 | 5.4 | TTGATTTACATCAA |
Serratia proteamaculans 568 | Spro_4595 | -72 | 5 | TTGATTTGCATCAA |
Yersinia pestis KIM | y3945 | -71 | 5.4 | TTGATTTACATCAA |
Position: -133
Score: 4.2 Sequence: TTGAGCAAGGTCAA
Locus tag: Ent638_3821
|
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Ent638_3821 | -133 | 4.2 | TTGAGCAAGGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: feoA | ||||
Ortholog function: Ferrous iron transport protein A | ||||
Citrobacter koseri ATCC BAA-895 | CKO_04830 | -204 | 4.1 | TTGAGCCATGTCAA |
Enterobacter sp. 638 | Ent638_3821 | -133 | 4.2 | TTGAGCAAGGTCAA |
Escherichia coli str. K-12 substr. MG1655 | b3408 | -203 | 4.4 | TTGAGCCACATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03778 | -198 | 3.8 | TTGCGGCATATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0209 | -206 | 3.5 | TGGATGCAAATCAT |
Proteus mirabilis HI4320 | PMI2920 | -190 | 5.2 | TTGATGTACATCAA |
Salmonella typhimurium LT2 | STM3505 | -204 | 4.4 | TTGAGCCATATCAA |
Serratia proteamaculans 568 | Spro_4628 | -284 | 3.8 | CTGATTTAACTCAC |
Yersinia pestis KIM | y3912 | -93 | 4 | ATTATTTAAATCAT |
Position: -340
Score: 3.6 Sequence: CTGATACGCGTCAA
Locus tag: Ent638_3830
|
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Ent638_3830 | -340 | 3.6 | CTGATACGCGTCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: malP | ||||
Ortholog function: Maltodextrin phosphorylase (EC 2.4.1.1) | ||||
Enterobacter sp. 638 | Ent638_3830 | -340 | 3.7 | CTGATACGCGTCAA |
Position: -241
Score: 3.7 Sequence: TTGTTAAATCTCAG
Locus tag: Ent638_3840
|
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Ent638_3840 | -241 | 3.7 | TTGTTAAATCTCAG | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: glgB | ||||
Ortholog function: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18) | ||||
Enterobacter sp. 638 | Ent638_3840 | -241 | 3.7 | TTGTTAAATCTCAG |
Position: -31
Score: 3.5 Sequence: TTTATTTGCACCAA
Locus tag: Ent638_3963
|
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Ent638_3963 | -31 | 3.5 | TTTATTTGCACCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: ysgA | ||||
Ortholog function: Predcited carboxymethylenebutenolidase (EC 3.1.1.45) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00172 | -133 | 4.1 | GTGATTTACATCAC |
Erwinia amylovora ATCC 49946 | EAM_0199 | -199 | 3.6 | TTAATCAAAATGAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0184 | -155 | 3.8 | GTGACTTAAATCAC |
Salmonella typhimurium LT2 | STM3967 | -169 | 4.2 | ATGACGTAAAACAA |
Serratia proteamaculans 568 | Spro_0243 | -174 | 3.8 | TTAATGCAGGTCAA |
Yersinia pestis KIM | y0443 | -296 | 4.2 | GTGATTTAAATCAC |
Position: -174
Score: 4 Sequence: CTGACCTGAATCAA
Locus tag: Ent638_4056
|
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Ent638_4056 | -174 | 4 | CTGACCTGAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pfkA | ||||
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_03085 | -132 | 4 | CTGACCTGAATCAA |
Edwardsiella tarda EIB202 | ETAE_3450 | -223 | 4 | CTGACCTGAATCAA |
Enterobacter sp. 638 | Ent638_4056 | -174 | 4 | CTGACCTGAATCAA |
Erwinia amylovora ATCC 49946 | EAM_0103 | -31 | 4 | ATTATTTGCATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4307 | -140 | 4 | CTGACCTGAATCAA |
Escherichia coli str. K-12 substr. MG1655 | b3916 | -125 | 4 | CTGACCTGAATCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04223 | -123 | 4 | CTGACCTGAATCAA |
Photorhabdus luminescens subsp. laumondii TTO1 | plu4774 | -203 | 4.1 | TTGATCTCAAAAAA |
Proteus mirabilis HI4320 | PMI3203 | -194 | 3.7 | TTAATGCGCATCAA |
Salmonella typhimurium LT2 | STM4062 | -126 | 4 | CTGACCTGAATCAA |
Serratia proteamaculans 568 | Spro_4807 | -145 | 4.1 | GTGACTTGAATCAA |
Yersinia pestis KIM | y0059 | -148 | 4.2 | CTGACTTGAATCAA |
Position: -132
Score: 3.6 Sequence: ATGATACAAAAAAA
Locus tag: Ent638_4063
|
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Ent638_4063 | -132 | 3.6 | ATGATACAAAAAAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: sodA | ||||
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1) | ||||
Enterobacter sp. 638 | Ent638_4063 | -132 | 3.6 | ATGATACAAAAAAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0092 | -143 | 3.5 | ATGAAGTAAAGCAA |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04217 | -146 | 4.2 | TTGTTCTACATCAC |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0075 | -346 | 3.6 | TTATGTCAAATCAA |
Proteus mirabilis HI4320 | PMI3036 | -164 | 3.8 | TTTATTTAAAATAA |
-85 | 4 | ATGATTTTCATTAA | ||
Position: -292
Score: 3.6 Sequence: TTGATTAATATGAC
Locus tag: Ent638_4125
|
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Ent638_4125 | -292 | 3.6 | TTGATTAATATGAC | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: atpI | ||||
Ortholog function: ATP synthase protein I | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00079 | -122 | 4.2 | TTGTTTGAAATCAC |
Enterobacter sp. 638 | Ent638_4125 | -292 | 3.7 | TTGATTAATATGAC |
Erwinia amylovora ATCC 49946 | EAM_3481 | -124 | 3.9 | TCGATTGAAATCAC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -191 | 3.7 | ATGATTGTTAGCAA |
Escherichia coli str. K-12 substr. MG1655 | b3739 | -123 | 4.2 | TTGTTTGAAATCAC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04144 | -122 | 4.2 | TTGTTTGAAATCAC |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0047 | -225 | 3.9 | ATTATTAAAAACAA |
Proteus mirabilis HI4320 | PMI3057 | -130 | 4 | |
Salmonella typhimurium LT2 | STM3872 | -122 | 4.2 | TTGTTTGAAATCAC |
Position: -27
Score: 4.2 Sequence: TTTATTTGAAACAA
Locus tag: Ent638_4127
|
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Ent638_4127 | -27 | 4.2 | TTTATTTGAAACAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: atpE | ||||
Ortholog function: ATP synthase C chain (EC 3.6.3.14) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00077 | -122 | 4.2 | TTGTTTGAAATCAC |
Enterobacter sp. 638 | Ent638_4127 | -292 | 3.7 | TTGATTAATATGAC |
Erwinia amylovora ATCC 49946 | EAM_3479 | -124 | 3.9 | TCGATTGAAATCAC |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4517 | -191 | 3.7 | ATGATTGTTAGCAA |
Escherichia coli str. K-12 substr. MG1655 | b3737 | -123 | 4.2 | TTGTTTGAAATCAC |
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04142 | -122 | 4.2 | TTGTTTGAAATCAC |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0045 | -225 | 3.9 | ATTATTAAAAACAA |
Proteus mirabilis HI4320 | PMI3059 | -130 | 4 | |
Salmonella typhimurium LT2 | STM3870 | -122 | 4.2 | TTGTTTGAAATCAC |
Position: -273
Score: 4.9 Sequence: TTGTTTTTAATCAA
Locus tag: Ent638_4137
|
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Ent638_4137 | -273 | 4.9 | TTGTTTTTAATCAA | |
Supported by regulated orthologs from reference regulons | ||||
Ortholog gene name: pstS | ||||
Ortholog function: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1) | ||||
Citrobacter koseri ATCC BAA-895 | CKO_00065 | -243 | 4.4 | CTGTTTTTAATCAA |
Edwardsiella tarda EIB202 | ETAE_3538 | -93 | 3.8 | TTTACTGTCATCAA |
Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4477 | -52 | 3.6 | CTGATTGATAACGA |
Escherichia coli str. K-12 substr. MG1655 | b3728 | -138 | 3.8 | CTTATTTAAATCAG |
Photorhabdus luminescens subsp. laumondii TTO1 | plu0214 | -33 | 3.9 | TTGTTGATTCTCAA |
Proteus mirabilis HI4320 | PMI2893 | -46 | 4 | TTGATAGATGTCGA |