Propagation of FadR regulog to Salmonella enterica subsp. enterica serovar Typhi str. M223
| Source regulog: | FadR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | activator (repressor) |
| Biological process: | Fatty acid degradation |
| Effector: | Palmitoyl-CoA; Oleoyl-CoA |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Salmonella enterica subsp. enterica serovar Typhi str. M223 |
| Orthologous TF(s) | SentesT_010100020906 |
| Regulated genes | 7 |
Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -70
Score: 3.9 Sequence: TAGAGGTCATACCAGTT
Locus tag: SentesT_010100000441
|
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| SentesT_010100000441 | -70 | 3.9 | TAGAGGTCATACCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadM | ||||
| Ortholog function: Long-chain acyl-CoA thioesterase FadM (EC=3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0443 | -59 | 4.5 | AAGAGGTCATACCAGTT |
| Salmonella typhimurium LT2 | STM0454 | -70 | 3.9 | TAGAGGTCATACCAGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02717 | -59 | 4.4 | ATGAGGTCATACCAGTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00405 | -54 | 4.3 | AAGTGGTGTGACCTCTT |
| Enterobacter sp. 638 | Ent638_0910 | -58 | 4.1 | AAGAGGTCATACCAGTC |
| Yersinia pestis KIM | y1033 | -49 | 3.8 | TTGAGGTCCTACCAGTT |
| Serratia proteamaculans 568 | Spro_1101 | -97 | 4.3 | TACAGGTCTTACCAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1154 | -44 | 4.4 | ATCAGGTCGTACCAGTT |
|
Position: -85
Score: 4.6 Sequence: CACTCATCCGATCAGTT
Locus tag: SentesT_010100002625
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| SentesT_010100002625 | -85 | 4.6 | CACTCATCCGATCAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: iclR | ||||
| Ortholog function: Acetate operon transcriptional repressor, IclR family | ||||
| Salmonella typhimurium LT2 | STM4187 | -85 | 4.6 | CACTCATCCGATCAGTT |
|
Position: -42
Score: 4.8 Sequence: ATCAGGTCAGACCACTA
Locus tag: SentesT_010100004517
|
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| SentesT_010100004517 | -42 | 4.8 | ATCAGGTCAGACCACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadI | ||||
| Ortholog function: FadI component of anaerobic fatty acid oxidation complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2342 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Salmonella typhimurium LT2 | STM2389 | -42 | 4.8 | ATCAGGTCAGACCACTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00448 | -43 | 5.1 | ATCAGGTCAGACCACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02724 | -44 | 5.1 | ATCAGGTCAGACCACTT |
| Enterobacter sp. 638 | Ent638_2882 | -48 | 5.1 | ATCAGGTCAGACCACTT |
| Yersinia pestis KIM | y1579 | -66 | 5 | ATCAGGTCAGACCTGTT |
| Serratia proteamaculans 568 | Spro_3379 | -56 | 5 | ATCAGGTCAGACCTCTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3079 | -53 | 5 | ATCAGGTCTGACCTGTT |
| Proteus mirabilis HI4320 | PMI1808 | -50 | 5 | ATCAGGTCAGACCTCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3201 | -81 | 4.7 | ATCAGGTCAGACCTGTC |
|
Position: -42
Score: 4.9 Sequence: ATCTGATACGACCAGAT
Locus tag: SentesT_010100012090
|
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| SentesT_010100012090 | -42 | 4.9 | ATCTGATACGACCAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadB | ||||
| Ortholog function: fatty oxidation complex, alpha subunit FadB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3846 | -42 | 5.1 | ATCTGGTACGACCAGAT |
| Salmonella typhimurium LT2 | STM3983 | -42 | 5.1 | ATCTGGTACGACCAGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00188 | -42 | 5.1 | ATCTGGTATGACCAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04340 | -43 | 5.1 | ATCTGGTATGACCAGAT |
| Enterobacter sp. 638 | Ent638_3949 | -43 | 5.1 | ATCTGGTATGACCAGAT |
| Erwinia amylovora ATCC 49946 | EAM_0213 | -44 | 5.1 | ATCTGGTATGACCAGAT |
| Yersinia pestis KIM | y0464 | -43 | 5 | ATCTGGTCATACCAGAT |
| Serratia proteamaculans 568 | Spro_0261 | -41 | 5 | ATCTGGTCATACCAGAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0208 | -43 | 5 | ATCTGGTCATACCAGAT |
| Proteus mirabilis HI4320 | PMI3550 | -38 | 5.1 | ATCTGGTCATACCAGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4402 | -43 | 5 | ATCTGGTCATACCAGAT |
|
Position: -89
Score: 4.7 Sequence: AACTGGTACGCTGAGTT
Locus tag: SentesT_010100013727
|
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| SentesT_010100013727 | -89 | 4.7 | AACTGGTACGCTGAGTT | |
| Supported by regulated orthologs from reference regulons | ||||