Propagation of Crp regulog to Serratia proteamaculans 568
| Source regulog: | Crp - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | CRP |
| Regulation mode: | activator (repressor) |
| Biological process: | Carbon catabolism |
| Effector: | Cyclic 3',5'-AMP |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Serratia proteamaculans 568 |
| Orthologous TF(s) | Spro_4580 |
| Regulated genes | 214 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -265
Score: 4.4 Sequence: TATTGTGAGCAACTACACGTTT
Locus tag: Spro_0001
|
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| Spro_0001 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: atpI | ||||
| Ortholog function: ATP synthase subunit I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3739 | -263 | 4.8 | ATATGTGATCTGAAGCACGCTT |
| Salmonella typhimurium LT2 | STM3872 | -262 | 4.6 | ATGTGTGATCTGGTGCACGCTT |
| -211 | 4.1 | TTTTGTACGATCGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00079 | -262 | 4.7 | ATATGTGATCCGAAGCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04144 | -262 | 4.7 | TTATGTGATCTGATGCACGCTT |
| Enterobacter sp. 638 | Ent638_4125 | -261 | 4.8 | TTTTGTGATCTCGTGCACGCTT |
| Erwinia amylovora ATCC 49946 | EAM_3481 | -264 | 4.4 | ATTTGTGATCGTGGACACGCTT |
| Yersinia pestis KIM | y4142 | -263 | 5.4 | TTATGTGATGTATTTCACGTTT |
| Serratia proteamaculans 568 | Spro_0001 | -265 | 4.4 | TATTGTGAGCAACTACACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4519 | -254 | 5 | TTATGTGAGTCACATCACAGAT |
| Edwardsiella tarda EIB202 | ETAE_3526 | -297 | 3.7 | AATCGTGAAAATATTTAAATTA |
| Proteus mirabilis HI4320 | PMI3057 | -259 | 5 | TTGTGTGTTCTAGATCACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0047 | -265 | 5.7 | TTATGTGATTTAAATCACATTT |
|
Position: -103
Score: 4.2 Sequence: TTTTGTGATCTTGATTGTAGTA
Locus tag: Spro_0041
|
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| Spro_0041 | -103 | 4.2 | TTTTGTGATCTTGATTGTAGTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dgoR | ||||
| Ortholog function: GntR domain protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4479 | -154 | 4.2 | TTTTGTGATCTAAATTGTAGTA |
| Salmonella typhimurium LT2 | STM3830 | -154 | 4.2 | TTTTGTGATCTAAATTGTAGTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04098 | -154 | 4.1 | TTTTGTGATCCAAATTGTAGTA |
| Enterobacter sp. 638 | Ent638_0006 | -154 | 4.2 | TTTTGTGATCCAGATTGTAGTA |
| Serratia proteamaculans 568 | Spro_0041 | -103 | 4.2 | TTTTGTGATCTTGATTGTAGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4419 | -164 | 4.2 | TTTTGTGATCCAGATTGTAGTA |
|
Position: -163
Score: 4 Sequence: CATTGTAATATAGATTAAAAAA
Locus tag: Spro_0054
|
||||
| Spro_0054 | -163 | 4 | CATTGTAATATAGATTAAAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malS | ||||
| Ortholog function: periplasmic alpha-amylase precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3571 | -269 | 4.2 | ATTTGAGAGTTGAATCTCAAAT |
| -152 | 4.1 | AAATGTGGGGGTTATCGCAAAA | ||
| -118 | 3.6 | TTGCGCGAGATCGCTCACCCTT | ||
| Salmonella typhimurium LT2 | STM3664 | -148 | 4.5 | AAATGTGGTGCTTATCGCAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03935 | -146 | 3.7 | AAATGCTAGCTTCGTCTCATTT |
| Enterobacter sp. 638 | Ent638_0150 | -264 | 4.2 | AATTGAGAGCGGAATCTCAAAT |
| -147 | 4.1 | AATTGTGTGCGATATCGCAGAT | ||
| -117 | 3.8 | AATTTTGCGCGAGATCACTCAT | ||
| Serratia proteamaculans 568 | Spro_0054 | -163 | 4 | CATTGTAATATAGATTAAAAAA |
|
Position: -312
Score: 5.4 Sequence: AATTGTGATTGATGTCACAATT
Position: -268
Score: 5.1 Sequence: AAATGTGATCGACGTCGCATTA
Position: -195
Score: 5.2 Sequence: AAATGTGATGTATATCACTATA
Locus tag: Spro_0072
|
||||
| Spro_0072 | -312 | 5.4 | AATTGTGATTGATGTCACAATT | |
| -268 | 5.1 | AAATGTGATCGACGTCGCATTA | ||
| -195 | 5.2 | AAATGTGATGTATATCACTATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtlA | ||||
| Ortholog function: PTS system, mannitol-specific IIC component (EC 2.7.1.69) / PTS system, mannitol-specific IIB component (EC 2.7.1.69) / PTS system, mannitol-specific IIA component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3599 | -206 | 4.5 | TTTTGTGATGAACGTCACGTCA |
| -162 | 5.4 | TTATGTGATTGATATCACACAA | ||
| -113 | 3.3 | TTCAGTGCCAGATTTCGCAGTA | ||
| Salmonella typhimurium LT2 | STM3685 | -207 | 4.8 | CTTTGTGATCAATATCACATCA |
| -163 | 5.4 | TTATGTGACGCAAATCACATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05054 | -203 | 5.2 | TTTTGTGATCAATATCACATCA |
| -159 | 5 | TCATGTGATCCAAATCACACAA | ||
| -110 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03942 | -208 | 4.9 | TTTTGTGATCATCATCACTAAA |
| -164 | 5.2 | TCATGTGATCCAAATCACATAA | ||
| -115 | 3.4 | TTCAGTGCCAGATTTCGCACTA | ||
| Enterobacter sp. 638 | Ent638_0136 | -224 | 3.4 | TATTTTTTTCATACTCTCATTT |
| -205 | 4.8 | TTTTGTGATGGCGATCACCTCA | ||
| -161 | 5.1 | TTGCGTGATGCAGATCACACAA | ||
| Erwinia amylovora ATCC 49946 | EAM_3416 | -229 | 3.3 | CATTGCGAATATCTTTACACTT |
| -210 | 3.9 | CTTCGTGACTCATGTCACTAAA | ||
| -166 | 4.8 | TTAAGTGACCCGCATCACACTT | ||
| -95 | 3.2 | CGTTTTGATCGTGATCCCTCAA | ||
| -34 | 3.5 | ACATGAGATTTGCATCATTAAT | ||
| Yersinia pestis KIM | y4087 | -223 | 4.6 | AGATGTGATCTTAATCAACAAA |
| -179 | 4.5 | TTGTGTGACTTTCGTCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0072 | -195 | 5.2 | AAATGTGATGTATATCACTATA |
| -151 | 4.5 | GTTGGTGATCTGCATCACAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0087 | -230 | 5.1 | TTTTGTGAAGTAAATCACCTAT |
| -186 | 4.5 | TTGTGTGATTTTTGTCACGTTG | ||
|
Position: -222
Score: 3.9 Sequence: TTTTATGATGGCGGTCATGCTT
Position: -131
Score: 4 Sequence: AATTATGAGATCTGTCGCACAT
Position: -129
Score: 4.6 Sequence: TTATGAGATCTGTCGCACATTT
Locus tag: Spro_0098
|
||||
| Spro_0098 | -222 | 3.9 | TTTTATGATGGCGGTCATGCTT | |
| -131 | 4 | AATTATGAGATCTGTCGCACAT | ||
| -129 | 4.6 | TTATGAGATCTGTCGCACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylA | ||||
| Ortholog function: Xylose isomerase (EC 5.3.1.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3565 | -224 | 3.9 | ATTTATGACCGAGATCTTACTT |
| -134 | 4.2 | TTTTGCGAGCGAGCGCACACTT | ||
| Salmonella typhimurium LT2 | STM3661 | -260 | 3.9 | TTATGCGAAATTCATCACAGCA |
| -133 | 4.4 | TTTTGAGAGCCAGAGCACATTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05021 | -214 | 4.1 | AATTATGACCGAGATCGTACTT |
| -122 | 4.2 | TTTTGCGAGGCGGCGCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03929 | -234 | 4.1 | TTTTGCGAGCTGGCGCACGTTT |
| Enterobacter sp. 638 | Ent638_0156 | -231 | 3.8 | ATTTATGACCGTGATCTGATTT |
| -135 | 3.9 | TTTTGGGAGCCAGCGCACGTTT | ||
| Yersinia pestis KIM | y4057 | -220 | 4.6 | TTATGAGATCTACACCACAATT |
| Serratia proteamaculans 568 | Spro_0098 | -222 | 3.9 | TTTTATGATGGCGGTCATGCTT |
| -129 | 4.6 | TTATGAGATCTGTCGCACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0097 | -223 | 4.7 | TTTTTTGATGCGGGTCATATTT |
| -135 | 4.4 | TTTTGCGACACAGCGCACATTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2275 | -251 | 4.6 | ATTTATGAGATAAATCACACAA |
|
Position: -259
Score: 4.4 Sequence: AAATGTGCGACAGATCTCATAA
Position: -257
Score: 4 Sequence: ATGTGCGACAGATCTCATAATT
Position: -166
Score: 3.7 Sequence: AAGCATGACCGCCATCATAAAA
Locus tag: Spro_0099
|
||||
| Spro_0099 | -259 | 4.4 | AAATGTGCGACAGATCTCATAA | |
| -257 | 4 | ATGTGCGACAGATCTCATAATT | ||
| -166 | 3.7 | AAGCATGACCGCCATCATAAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylF | ||||
| Ortholog function: Xylose ABC transporter, periplasmic xylose-binding protein XylF | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3566 | -253 | 4.2 | AAGTGTGCGCTCGCTCGCAAAA |
| -163 | 3.7 | AAGTAAGATCTCGGTCATAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_05022 | -254 | 4.1 | AAGTGTGCGCCGCCTCGCAAAA |
| -162 | 3.8 | AAGTACGATCTCGGTCATAATT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03930 | -234 | 3.8 | AAATACGATCGCCGTCATAATT |
| Enterobacter sp. 638 | Ent638_0155 | -264 | 3.9 | AAACGTGCGCTGGCTCCCAAAA |
| Yersinia pestis KIM | y4056 | -264 | 4.8 | AATTGTGGTGTAGATCTCATAA |
| -160 | 4.2 | AAACATGATCGTTATCATAAAA | ||
| Serratia proteamaculans 568 | Spro_0099 | -259 | 4.4 | AAATGTGCGACAGATCTCATAA |
| -166 | 3.7 | AAGCATGACCGCCATCATAAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0098 | -272 | 4.5 | AAATATGACCCGCATCAAAAAA |
|
Position: -271
Score: 3.8 Sequence: TTGTTTGCTGTTTCTCACAGTC
Locus tag: Spro_0138
|
||||
| Spro_0138 | -271 | 3.8 | TTGTTTGCTGTTTCTCACAGTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dppA | ||||
| Ortholog function: dipeptide ABC transporter, substrate-binding protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_04994 | -121 | 3.8 | TTATGTGAACGGAATCCCCATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03899 | -62 | 4 | ATATGCAAACAACATCACAATT |
| Yersinia pestis KIM | y3825 | -211 | 3.9 | AGATGTGAGCCATATAACCTCT |
| Serratia proteamaculans 568 | Spro_0138 | -271 | 3.8 | TTGTTTGCTGTTTCTCACAGTC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0300 | -223 | 3.7 | AAATGTGCGCATTGTCATGTTT |
|
Position: -223
Score: 4.2 Sequence: AAACGTGATCAATCTAACACCT
Locus tag: Spro_0178
|
||||
| Spro_0178 | -223 | 4.2 | AAACGTGATCAATCTAACACCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hemC | ||||
| Ortholog function: porphobilinogen deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3805 | -236 | 4.2 | AAACGTGATCAATTTAACACCT |
| Salmonella typhimurium LT2 | STM3938 | -219 | 4.2 | AAACGTGATCAATTTAACACCT |
| Citrobacter koseri ATCC BAA-895 | CKO_00147 | -220 | 4.2 | AAACGTGATCAATTTAACACCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04304 | -232 | 4.2 | AAACGTGATCAATTTAACACCT |
| Enterobacter sp. 638 | Ent638_3987 | -211 | 4.2 | AAACGTGATCAATCTAACACCT |
| Serratia proteamaculans 568 | Spro_0178 | -223 | 4.2 | AAACGTGATCAATCTAACACCT |
| Edwardsiella tarda EIB202 | ETAE_0118 | -205 | 4.2 | AAACGTGATCAATTTAACACCT |
|
Position: -115
Score: 4 Sequence: AGGTGTTAGATTGATCACGTTT
Locus tag: Spro_0179
|
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| Spro_0179 | -115 | 4 | AGGTGTTAGATTGATCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyaA | ||||
| Ortholog function: Adenylate cyclase (EC 4.6.1.1) | ||||
| Yersinia pestis KIM | y0382 | -151 | 4 | AGGTGTTAGATTGATCACGTTT |
| Serratia proteamaculans 568 | Spro_0179 | -115 | 4 | AGGTGTTAGATTGATCACGTTT |
| Edwardsiella tarda EIB202 | ETAE_0119 | -119 | 4 | AGGTGTTAAATTGATCACGTTT |
|
Position: -88
Score: 3.8 Sequence: TTGTAAGAATTGAATCACAATA
Position: -53
Score: 4.2 Sequence: TCTTGTGCCAGAGGTCACATTT
Locus tag: Spro_0196
|
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| Spro_0196 | -88 | 3.8 | TTGTAAGAATTGAATCACAATA | |
| -53 | 4.2 | TCTTGTGCCAGAGGTCACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pldB | ||||
| Ortholog function: Lysophospholipase L2 (EC 3.1.1.5) | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_00166 | -60 | 3.8 | TATTGTGTCAGGCATCATAAAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04321 | -56 | 3.8 | TTGTGTGATACACGGTAAAAAA |
| Enterobacter sp. 638 | Ent638_3971 | -56 | 4.3 | TTTTGTGATGCGTCACGAAAAA |
| Yersinia pestis KIM | y0400 | -144 | 4.8 | AGTTGTGCTATGGCTCACAAAA |
| Serratia proteamaculans 568 | Spro_0196 | -88 | 3.8 | TTGTAAGAATTGAATCACAATA |
| -53 | 4.2 | TCTTGTGCCAGAGGTCACATTT | ||
| Edwardsiella tarda EIB202 | ETAE_3343 | -217 | 3.9 | CGGTGTGATAATCCTCAAACTT |
|
Position: -249
Score: 4.5 Sequence: GAATGTGATCATAATCACGATT
Locus tag: Spro_0199
|
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| Spro_0199 | -249 | 4.5 | GAATGTGATCATAATCACGATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpT | ||||
| Ortholog function: glycerol-3-phosphate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2240 | -219 | 3.7 | TTGTTTGATTTCGCGCATATTC |
| -179 | 3.6 | AAACGTGATTTCATGCGTCATT | ||
| -129 | 4.6 | ATGTGTGCGGCAATTCACATTT | ||
| Salmonella typhimurium LT2 | STM2283 | -220 | 3.6 | ATGTTTGATTTCGCGCATAATC |
| -180 | 4.2 | AAACGTGATTTCGTGCGCCTTT | ||
| -131 | 5.2 | ATATGTGCTGTAATTCACATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00537 | -221 | 3.6 | TTGTTTGATTTCGCGCATAATC |
| -181 | 4 | AAACGTGATTTCGTGCGCTTTT | ||
| -132 | 4.8 | ATCTGTGCTGTAATTCACATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02646 | -218 | 3.8 | TTGTTTGATTTCGAGCATATTC |
| -178 | 4.6 | TTATGTGATTTCGTGCTCACAT | ||
| -128 | 4.5 | AATTGTGCGATGTTTCACAGTA | ||
| Enterobacter sp. 638 | Ent638_2804 | -201 | 3.6 | TTGTTTGATTTCGAACATAATC |
| -161 | 3.8 | AAGCGTGATCTCATGCGCTTAT | ||
| -111 | 4 | ATCTGTGCGTTGATTCACAGTA | ||
| Erwinia amylovora ATCC 49946 | EAM_0195 | -240 | 3.7 | AAACGCGATGCGGTTAACGATG |
| -147 | 3.7 | ATTTGTGCCTCTCTTCACGGTC | ||
| Serratia proteamaculans 568 | Spro_0199 | -249 | 4.5 | GAATGTGATCATAATCACGATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4166 | -253 | 3.7 | ATGTTTGATAAAGAGCAAAAAC |
| -193 | 4.9 | AAGTGTGATTTGCATCACTAAA | ||
| Edwardsiella tarda EIB202 | ETAE_3116 | -200 | 3.7 | ATATGAGCGATCTCTCACAGTA |
| Proteus mirabilis HI4320 | PMI3591 | -291 | 3.6 | ATGTTTGATAATGAGCAAAAAC |
| -232 | 5.4 | ATATGTGATACTAATCACAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4119 | -250 | 4.9 | TATTGTGACAATTGTCACAATT |
|
Position: -138
Score: 4.9 Sequence: AATCGTGATTATGATCACATTC
Locus tag: Spro_0200
|
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| Spro_0200 | -138 | 4.9 | AATCGTGATTATGATCACATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpA | ||||
| Ortholog function: sn-glycerol-3-phosphate dehydrogenase subunit A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2241 | -165 | 4.6 | AAATGTGAATTGCCGCACACAT |
| Salmonella typhimurium LT2 | STM2284 | -163 | 5 | TAATGTGAATTACAGCACATAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00536 | -163 | 4.7 | TAATGTGAATTACAGCACAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02647 | -165 | 4.3 | TACTGTGAAACATCGCACAATT |
| -115 | 3.8 | ATGTGAGCACGAAATCACATAA | ||
| Enterobacter sp. 638 | Ent638_2805 | -163 | 4.1 | TACTGTGAATCAACGCACAGAT |
| Yersinia pestis KIM | y0404 | -231 | 3.6 | AATTGTTACCTATTTTATGAAA |
| -155 | 4.4 | ACCTGTGATTTTGATCACAATC | ||
| Serratia proteamaculans 568 | Spro_0200 | -231 | 3.6 | CGCTGTGATGGATGGCGCAATT |
| -138 | 4.9 | AATCGTGATTATGATCACATTC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4165 | -148 | 5.1 | TTTAGTGATGCAAATCACACTT |
| Edwardsiella tarda EIB202 | ETAE_3115 | -247 | 4 | TACTGTGAGAGATCGCTCATAT |
| -142 | 4.8 | TAGAGTGATTTTGATCACATTG | ||
| Proteus mirabilis HI4320 | PMI3592 | -262 | 3.7 | TACTGTGAAGTAATACTCAGTT |
| -170 | 5.5 | ATTTGTGATTAGTATCACATAT | ||
|
Position: -143
Score: 5.3 Sequence: TTTTGTGACTTTAATCACAAAA
Locus tag: Spro_0244
|
||||
| Spro_0244 | -143 | 5.3 | TTTTGTGACTTTAATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: udp | ||||
| Ortholog function: Uridine phosphorylase (EC 2.4.2.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3831 | -144 | 5.2 | TTATGTGATTTGCATCACTTTT |
| -92 | 4.2 | CATGGTGATGAGTATCACGAAA | ||
| Salmonella typhimurium LT2 | STM3968 | -144 | 5.1 | TATTGTGATGAACATCACTTTT |
| -92 | 4.1 | CATAGTGATGGCTGTCACGAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00173 | -143 | 5.2 | TTATGTGATGTAAATCACTATT |
| -91 | 3.9 | CATGGTGATGAGCGTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04327 | -143 | 5.2 | TAATGTGATGTGTATCACTATT |
| -91 | 4.1 | CTTGGTGACTATCATCACAAAA | ||
| Enterobacter sp. 638 | Ent638_3962 | -143 | 4.7 | TAGTGTGATGCATGTCACTATT |
| Erwinia amylovora ATCC 49946 | EAM_0200 | -143 | 4.6 | AATTGCGACTTGTATCACCTTT |
| -90 | 4 | ATTAAGGATGTTCATCACATAA | ||
| Yersinia pestis KIM | y0444 | -149 | 5.4 | ATGTGTGATTTAAATCACAATT |
| -97 | 4 | CAAGGTGACATAAATCACGAAA | ||
| Serratia proteamaculans 568 | Spro_0244 | -143 | 5.3 | TTTTGTGACTTTAATCACAAAA |
| -125 | 3.7 | AAAAGTTATGTAGATTGCATTC | ||
| -91 | 4.1 | CATAGTGATGGTTGTCACGAAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0185 | -197 | 5.1 | AAAAGTGATTTAAGTCACATTT |
| Edwardsiella tarda EIB202 | ETAE_0143 | -148 | 4.7 | TATTGTGAAAATAATCACAGTT |
| Proteus mirabilis HI4320 | PMI3532 | -145 | 5.1 | ATTTGTGATAACTATCACGTTT |
| -93 | 3.6 | ACAGGTGACGTCAATCACTAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4417 | -271 | 5.2 | TTTTGTGATTTATATCTCAAAA |
| -219 | 4 | TGAAGTGACATTTATCACTAAA | ||
|
Position: -181
Score: 3.4 Sequence: AAACGTGATTTAACGCCTCATT
Locus tag: Spro_0290
|
||||
| Spro_0290 | -181 | 3.4 | AAACGTGATTTAACGCCTCATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hupA | ||||
| Ortholog function: DNA-binding protein HU-alpha (HU-2) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4000 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_02986 | -179 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04382 | -179 | 3.4 | AAACGTGATTTACCGCCTGAAT |
| Enterobacter sp. 638 | Ent638_0213 | -179 | 3.5 | AAACGTGATTTAACGCCTGTTT |
| Yersinia pestis KIM | y0499 | -181 | 3.4 | AAACGTGATTTAACGCCTGATT |
| Serratia proteamaculans 568 | Spro_0290 | -181 | 3.4 | AAACGTGATTTAACGCCTCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0238 | -197 | 3.3 | AAACGTGATTTAAGGCCTGAAA |
| Edwardsiella tarda EIB202 | ETAE_0183 | -182 | 3.3 | AAACGTGATTTAACACCTGATT |
| Proteus mirabilis HI4320 | PMI2771 | -183 | 3.7 | AAACGTGATTTAGTGCTTGAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0492 | -179 | 3.4 | AAACGTGATTTAATGCTTTAAA |
|
Position: -97
Score: 4 Sequence: TTGCGTGATCTGCCGCCCAAAA
Locus tag: Spro_0297
|
||||
| Spro_0297 | -97 | 4 | TTGCGTGATCTGCCGCCCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acs | ||||
| Ortholog function: acetyl-coenzyme A synthetase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4069 | -100 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Salmonella typhimurium LT2 | STM4275 | -100 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03816 | -101 | 4.3 | TTGCGTGATCTGCCGCGCAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04478 | -101 | 3.9 | TTGCGTGATCTGCCCCCCAATT |
| Enterobacter sp. 638 | Ent638_0276 | -101 | 4.1 | TTGCGTGATCTGTCGCCCAAAT |
| Yersinia pestis KIM | y0510 | -97 | 4.2 | ATACGTGATCTGCCGCCCAAAA |
| Serratia proteamaculans 568 | Spro_0297 | -97 | 4 | TTGCGTGATCTGCCGCCCAAAA |
| Proteus mirabilis HI4320 | PMI3037 | -97 | 4.5 | TTTCGTGATCTTATGCGCAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0074 | -98 | 4.2 | TTGCGTGATCTTCCGCGCAAAA |
|
Position: -205
Score: 4.7 Sequence: AAACGTGAATGAGATCACAGAA
Locus tag: Spro_0406
|
||||
| Spro_0406 | -205 | 4.7 | AAACGTGAATGAGATCACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aspA | ||||
| Ortholog function: aspartate ammonia-lyase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4139 | -206 | 4.5 | AGCGGTGATCTATTTCACAAAT |
| -156 | 4.2 | TAAAGTGATCCAGATTACGGTA | ||
| Salmonella typhimurium LT2 | STM4326 | -209 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| -159 | 4.2 | TTAAGTGATCCAGATTACGGTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03696 | -54 | 4.2 | AGCGGTGACCTATTTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04529 | -204 | 3.9 | AGCGGTGACCCATTTCACAGAT |
| -154 | 3.8 | ATAAGTGATCAAGCTTACTGAT | ||
| Enterobacter sp. 638 | Ent638_0326 | -205 | 4.1 | AGCGGTGATTCATTTCACAGAT |
| Erwinia amylovora ATCC 49946 | EAM_0416 | -228 | 4.2 | CAATGTGACCTGGAACAGATAT |
| Yersinia pestis KIM | y0606 | -224 | 4.6 | AAGTGTGAGAGCAATCACAGAT |
| Serratia proteamaculans 568 | Spro_0406 | -205 | 4.7 | AAACGTGAATGAGATCACAGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0621 | -272 | 4 | ACTCGTGACTACAATCACAGTT |
| Edwardsiella tarda EIB202 | ETAE_0311 | -197 | 4.4 | ATCTGTGAGTATTATCACAGAT |
| Proteus mirabilis HI4320 | PMI2546 | -206 | 4.1 | ATCCATGAGATAGATCACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4137 | -274 | 3.8 | AGATATAATTGGGGTCACAGTT |
| -211 | 5.6 | AATTGTGATAAATATCACATAT | ||
|
Position: -117
Score: 4.9 Sequence: TTCTGTGATCTCATTCACGTTT
Locus tag: Spro_0407
|
||||
| Spro_0407 | -117 | 4.9 | TTCTGTGATCTCATTCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fxsA | ||||
| Ortholog function: suppressor of F plamsid exlusion of phage T7 | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4140 | -202 | 4.1 | TACCGTAATCTGGATCACTTTA |
| -152 | 4.3 | ATTTGTGAAATAGATCACCGCT | ||
| Salmonella typhimurium LT2 | STM4327 | -203 | 4.1 | TACCGTAATCTGGATCACTTAA |
| -153 | 4.1 | TTTTGTGAAATAGGTCACCGCT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03695 | -156 | 4.1 | TTTTGTGAAATAGGTCACCGCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04530 | -140 | 3.7 | ATCTGTGAAATGGGTCACCGCT |
| Enterobacter sp. 638 | Ent638_0327 | -151 | 3.8 | ATCTGTGAAATGAATCACCGCT |
| Erwinia amylovora ATCC 49946 | EAM_0417 | -161 | 3.9 | ATATCTGTTCCAGGTCACATTG |
| Yersinia pestis KIM | y0607 | -245 | 4.8 | ATCTGTGATTGCTCTCACACTT |
| Serratia proteamaculans 568 | Spro_0407 | -117 | 4.9 | TTCTGTGATCTCATTCACGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0623 | -245 | 3.7 | AACTGTGATTGTAGTCACGAGT |
| -185 | 3.6 | AAATGTGCAAAGGCGCACCCAT | ||
| Edwardsiella tarda EIB202 | ETAE_0312 | -189 | 4.6 | ATCTGTGATAATACTCACAGAT |
| Proteus mirabilis HI4320 | PMI2545 | -188 | 4.7 | TTTTGTGATCTATCTCATGGAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4136 | -188 | 5.6 | ATATGTGATATTTATCACAATT |
|
Position: -95
Score: 3.8 Sequence: TTTTCTGCCACACTTCACAGTT
Locus tag: Spro_0453
|
||||
| Spro_0453 | -95 | 3.8 | TTTTCTGCCACACTTCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cpdB | ||||
| Ortholog function: 2',3'-cyclic-nucleotide 2'-phosphodiesterase precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4213 | -118 | 3.8 | AACTGTGATAGTGTCATCATTT |
| -85 | 3.8 | AATTGTGGCATTCTTCACTGTT | ||
| Salmonella typhimurium LT2 | STM4403 | -145 | 3.7 | TTCTGTGAACACTCGCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03616 | -25 | 4.2 | TTTTGTGTTTCAGATCTAAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04607 | -156 | 3.8 | TTGTTTTATTTATATCGCATCA |
| -87 | 3.7 | TTTTCTGGCAAGATTCACATTT | ||
| -35 | 4.2 | TTCTGTGCTATCGCTCATAAAA | ||
| Enterobacter sp. 638 | Ent638_0392 | -34 | 4 | TTTTGTGGCTTGGATCGAAAAA |
| Yersinia pestis KIM | y0653 | -148 | 3.6 | AACTGTGAGCGTCTACGCGTTA |
| -116 | 3.8 | TTTTCTGCCAAACTTCACACTT | ||
| -63 | 4.4 | TTTTGCGATACATATCGAATAT | ||
| Serratia proteamaculans 568 | Spro_0453 | -95 | 3.8 | TTTTCTGCCACACTTCACAGTT |
|
Position: -180
Score: 3.7 Sequence: AACTGTGAAGTGTGGCAGAAAA
Locus tag: Spro_0454
|
||||
| Spro_0454 | -180 | 3.7 | AACTGTGAAGTGTGGCAGAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cysQ | ||||
| Ortholog function: PAPS (adenosine 3'-phosphate 5'-phosphosulfate) 3'(2'),5'-bisphosphate nucleotidase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4214 | -126 | 3.6 | AACAGTGAAGAATGCCACAATT |
| Salmonella typhimurium LT2 | STM4404 | -144 | 3.9 | TTTTTTGCGAGTGTTCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03615 | -178 | 4.1 | TTTTTAGATCTGAAACACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04608 | -178 | 4.1 | TTTTATGAGCGATAGCACAGAA |
| -126 | 3.7 | AAATGTGAATCTTGCCAGAAAA | ||
| -57 | 3.9 | TGATGCGATATAAATAAAACAA | ||
| Enterobacter sp. 638 | Ent638_0393 | -167 | 3.9 | TTTTTCGATCCAAGCCACAAAA |
| Erwinia amylovora ATCC 49946 | EAM_0455 | -158 | 4.2 | AAATGTGACACAGCACGAATAA |
| Serratia proteamaculans 568 | Spro_0454 | -180 | 3.7 | AACTGTGAAGTGTGGCAGAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3601 | -258 | 3.7 | TAAAGTGATTATCGTCTCTAAA |
|
Position: -96
Score: 4.8 Sequence: TAATTTGAGCCGGTTCACACTT
Locus tag: Spro_0495
|
||||
| Spro_0495 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deaD | ||||
| Ortholog function: ATP-independent RNA helicase | ||||
| Salmonella typhimurium LT2 | STM3280.S | -154 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04559 | -103 | 3.9 | CTTTTTGATTGCCATCACCTTC |
| -48 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03570 | -154 | 3.8 | TTTTTTGCTTGCCATCACCTTC |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACAT | ||
| Enterobacter sp. 638 | Ent638_3599 | -154 | 4.1 | TCTTATGATTGCCATCACCTTA |
| -99 | 4.4 | TACTTTGAGCCGGTTCACACTT | ||
| Erwinia amylovora ATCC 49946 | EAM_3065 | -99 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Yersinia pestis KIM | y0696 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Serratia proteamaculans 568 | Spro_0495 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0718 | -96 | 4.4 | CAATTTGAGCCGGTTCACACTT |
| Edwardsiella tarda EIB202 | ETAE_0411 | -96 | 4.8 | TAATTTGAGCCGGTTCACACTT |
| Proteus mirabilis HI4320 | PMI3424 | -80 | 5 | TAATTTGAGCCAGTTCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4523 | -95 | 5 | TAATTTGAGCCAGTTCACATTT |
|
Position: -124
Score: 3.8 Sequence: TTTTGTGATCCTCGCCCCAAAC
Locus tag: Spro_0529
|
||||
| Spro_0529 | -124 | 3.8 | TTTTGTGATCCTCGCCCCAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: treB | ||||
| Ortholog function: PTS system, trehalose-specific IIB component (EC 2.7.1.69) / PTS system, trehalose-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4240 | -101 | 3.8 | AATTGTGATCTTCGCTGCGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_03571 | -156 | 3.8 | ATTTGTGATCTTCGCTGCGTTT |
| Enterobacter sp. 638 | Ent638_0439 | -106 | 4 | TATTGTGATCTTCACCCGATTT |
| Serratia proteamaculans 568 | Spro_0529 | -124 | 3.8 | TTTTGTGATCCTCGCCCCAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3288 | -127 | 4.3 | CAATGTGATCTTCAACCCATTT |
|
Position: -189
Score: 4.4 Sequence: AAAAGTGACCACCATCACGAAA
Locus tag: Spro_0576
|
||||
| Spro_0576 | -189 | 4.4 | AAAAGTGACCACCATCACGAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ascF | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2715 | -177 | 4.2 | TCAGGTGACCGGTTTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04070 | -179 | 4.4 | ACAAGTGATCATTCTCACAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03051 | -168 | 4.1 | CTTAGCGATCAAAATCACAAAA |
| Enterobacter sp. 638 | Ent638_3188 | -128 | 4.4 | CAAAGTGATCGTTATCACGAAT |
| -54 | 3.7 | TTTTGTGAAACCGGTTTCCTAT | ||
| Serratia proteamaculans 568 | Spro_0576 | -189 | 4.4 | AAAAGTGACCACCATCACGAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2165 | -255 | 3.9 | CATGGCGATCGTGGTCACATAA |
| -212 | 3.9 | TATTGAAATCGCACTCATATAT | ||
|
Position: -224
Score: 5.2 Sequence: ATTTGTGATCGTGATAACAAAA
Locus tag: Spro_0624
|
||||
| Spro_0624 | -224 | 5.2 | ATTTGTGATCGTGATAACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hpaR | ||||
| Ortholog function: 4-hydroxyphenylacetate catabolism | ||||
| Yersinia pestis KIM | y2548 | -253 | 5 | ATTCGTGATCTTGATAACAATT |
| Serratia proteamaculans 568 | Spro_0624 | -224 | 5.2 | ATTTGTGATCGTGATAACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0991 | -285 | 3.9 | AATTTTAATTGTGATCTCAGTA |
| -279 | 5 | AATTGTGATCTCAGTAACAATA | ||
|
Position: -123
Score: 5 Sequence: TTTTGTTATCACGATCACAAAT
Locus tag: Spro_0625
|
||||
| Spro_0625 | -123 | 5 | TTTTGTTATCACGATCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hpaG | ||||
| Ortholog function: 4-hydroxyphenylacetate catabolism | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04789 | -125 | 4.4 | TTGTGTTAATCCGATCACAAAA |
| Serratia proteamaculans 568 | Spro_0625 | -123 | 5 | TTTTGTTATCACGATCACAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0990 | -159 | 3.7 | AATAATGATAAAAAACAAATTT |
| -129 | 4.9 | TATTGTTACTGAGATCACAATT | ||
|
Position: -181
Score: 3.9 Sequence: AACCGTGACGCATGTCACGTAC
Locus tag: Spro_0659
|
||||
| Spro_0659 | -181 | 3.9 | AACCGTGACGCATGTCACGTAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC2 | ||||
| Ortholog function: Na+ dependent nucleoside transporter | ||||
| Yersinia pestis KIM | y3744 | -154 | 3.8 | CTTTGTCAATAACCTCACATAT |
| -115 | 5.5 | TAATGTGATTATGATCACATTT | ||
| Serratia proteamaculans 568 | Spro_0659 | -181 | 3.9 | AACCGTGACGCATGTCACGTAC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0473 | -182 | 4.9 | AATTGTGACGAAGATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_0482 | -232 | 4.9 | TGATGTGATATGCATCACTTTT |
| Proteus mirabilis HI4320 | PMI2418 | -180 | 5.2 | TAGTGTGATTTAGATCTCATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0519 | -178 | 5.5 | TTGTGTGATTCACATCACATTT |
|
Position: -262
Score: 4.6 Sequence: ATTTGTGAACGATATCGCGTTA
Position: -240
Score: 5.5 Sequence: TTTTGTGATGGTCTTCACATAT
Position: -188
Score: 3.8 Sequence: TAGTGTGACTGTGAACGCGAAT
Locus tag: Spro_0660
|
||||
| Spro_0660 | -262 | 4.6 | ATTTGTGAACGATATCGCGTTA | |
| -240 | 5.5 | TTTTGTGATGGTCTTCACATAT | ||
| -188 | 3.8 | TAGTGTGACTGTGAACGCGAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: deoC | ||||
| Ortholog function: 2-deoxyribose-5-phosphate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4381 | -149 | 4.6 | TTATTTGAACCAGATCGCATTA |
| -96 | 4.5 | AATTGTGATGTGTATCGAAGTG | ||
| Salmonella typhimurium LT2 | STM4567 | -133 | 4.9 | TAATTTGATTCAGATCTCATTA |
| -80 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03410 | -134 | 4.2 | TTATTTGAAGTGGATCTCGTTA |
| -81 | 4.2 | AACTGTGATGTATATCGAAGTG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04837 | -158 | 5.2 | ATTTGTGATTTTAATCACGTTA |
| -105 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Enterobacter sp. 638 | Ent638_0541 | -151 | 4.6 | AAATTTGAAGTGGATCTCATTA |
| -98 | 3.7 | AACTGTGATGAATGTCGAAGTG | ||
| Erwinia amylovora ATCC 49946 | EAM_0615 | -233 | 4.6 | TGATGTGATAATTCTAACATTA |
| Yersinia pestis KIM | y3743 | -169 | 3.7 | TGCGGTGAGATGGATCTCAATT |
| Serratia proteamaculans 568 | Spro_0660 | -262 | 4.6 | ATTTGTGAACGATATCGCGTTA |
| -240 | 5.5 | TTTTGTGATGGTCTTCACATAT | ||
| -188 | 3.8 | TAGTGTGACTGTGAACGCGAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0727 | -282 | 4.4 | AAGTGTGAATGAATGCACAAAA |
| Proteus mirabilis HI4320 | PMI2416 | -267 | 4.4 | ATATGTGAGTTACTTCGCAACT |
| -135 | 5.6 | TTTTGTGATTCTGATCACAATT | ||
| -83 | 4.5 | TATTGTGACAGAAAGCACATCT | ||
|
Position: -75
Score: 3.8 Sequence: TTCTGTGACCTAAAACATAAAC
Locus tag: Spro_0680
|
||||
| Spro_0680 | -75 | 3.8 | TTCTGTGACCTAAAACATAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: creA | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4397 | -81 | 3.7 | TATTGAGATTTTGTTCTTAATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04852 | -42 | 3.8 | TTTTTTAATAATGGTAACAATA |
| Serratia proteamaculans 568 | Spro_0680 | -75 | 3.8 | TTCTGTGACCTAAAACATAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0561 | -111 | 4 | CTTTGTGAAATTATTCTAATAA |
|
Position: -339
Score: 3.8 Sequence: CAGTGTGATCCACTGCAAAACT
Locus tag: Spro_0683
|
||||
| Spro_0683 | -339 | 3.8 | CAGTGTGATCCACTGCAAAACT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: thrA | ||||
| Ortholog function: Aspartokinase (EC 2.7.2.4) / Homoserine dehydrogenase (EC 1.1.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0002 | -83 | 3.8 | TTTATTGACTTAGGTCACTAAA |
| Salmonella typhimurium LT2 | STM0002 | -103 | 4.2 | GAATGTGATCAATTTAAAAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03385 | -249 | 4.1 | GAATGTGATCAAATTAAAAATT |
| Enterobacter sp. 638 | Ent638_0564 | -252 | 4.4 | AATTGTGATCAAATTAGAAATT |
| Proteus mirabilis HI4320 | PMI0001 | -232 | 3.9 | AAATTTGACATCTCTCTCGCTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0563 | -223 | 4.2 | ATGTTTGACTTTGCGCACAAAT |
|
Position: -120
Score: 4.7 Sequence: AAGTGTGATATAAATCGCTTAT
Locus tag: Spro_0694
|
||||
| Spro_0694 | -120 | 4.7 | AAGTGTGATATAAATCGCTTAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nhaA | ||||
| Ortholog function: Na+/H+ antiporter NhaA type | ||||
| Salmonella typhimurium LT2 | STM0039 | -97 | 3.7 | AAACGAGCTATTCATCATATAT |
| Yersinia pestis KIM | y3704 | -147 | 4.1 | AAATGTGATATGCGTTATCAAT |
| Serratia proteamaculans 568 | Spro_0694 | -120 | 4.7 | AAGTGTGATATAAATCGCTTAT |
| Proteus mirabilis HI4320 | PMI0011 | -110 | 3.9 | ATAAGCGATTGAGATCGAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0587 | -122 | 4.4 | TATTGAGATGTAGATCATCAAT |
|
Position: -158
Score: 3.8 Sequence: CAGTGTGACCGCCCGCTCATTT
Locus tag: Spro_0774
|
||||
| Spro_0774 | -158 | 3.8 | CAGTGTGACCGCCCGCTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: coaE | ||||
| Ortholog function: dephospho-CoA kinase | ||||
| Erwinia amylovora ATCC 49946 | EAM_0727 | -75 | 4.4 | TCGTGTGATCTGCGCCACATTA |
| Yersinia pestis KIM | y0757 | -259 | 3.8 | AAATGTGATCGGGCGTAAAACA |
| Serratia proteamaculans 568 | Spro_0774 | -158 | 3.8 | CAGTGTGACCGCCCGCTCATTT |
| Edwardsiella tarda EIB202 | ETAE_0650 | -272 | 4 | AAATGTGATCATACAAACGATT |
| Proteus mirabilis HI4320 | PMI2052 | -80 | 3.8 | TCTTGTGATAAAAATCAGTTTA |
|
Position: -196
Score: 4.8 Sequence: TATTGTGATTTGACGCGCAAAA
Locus tag: Spro_0805
|
||||
| Spro_0805 | -196 | 4.8 | TATTGTGATTTGACGCGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hutU | ||||
| Ortholog function: urocanate hydratase | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02357 | -123 | 3.8 | AAGCGTGATTGCTGACGCAATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00795 | -124 | 4 | AAACGTGATTGCTGACGCAATA |
| Enterobacter sp. 638 | Ent638_1263 | -120 | 4 | AAGCGTGATAGCTAACGCAATA |
| Erwinia amylovora ATCC 49946 | EAM_1253 | -121 | 3.8 | TTTTGTGACAAAGCTGGCACAA |
| Yersinia pestis KIM | y4038 | -261 | 4.9 | ATATGTGATTTGGTGCGCAAAT |
| Serratia proteamaculans 568 | Spro_0805 | -196 | 4.8 | TATTGTGATTTGACGCGCAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3193 | -203 | 4.7 | ATTTGTGATTATAAACACAAAA |
|
Position: -177
Score: 4.6 Sequence: ATTTGCGAGACAGATCACACTA
Locus tag: Spro_0834
|
||||
| Spro_0834 | -177 | 4.6 | ATTTGCGAGACAGATCACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: chbB | ||||
| Ortholog function: N,N'-diacetylchitobiose-specific PTS system , EIIB component | ||||
| Yersinia pestis KIM | y1251 | -214 | 4.5 | TTTTGCGATAACCATCACATTG |
| Serratia proteamaculans 568 | Spro_0834 | -177 | 4.6 | ATTTGCGAGACAGATCACACTA |
| -143 | 3.6 | AAATGTGAAGAGGGTCAATCAG | ||
|
Position: -83
Score: 4.8 Sequence: ATACGTGATTTTCATCACGCAT
Locus tag: Spro_0882
|
||||
| Spro_0882 | -83 | 4.8 | ATACGTGATTTTCATCACGCAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: raiA | ||||
| Ortholog function: stationary phase translation inhibitor and ribosome stability factor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2597 | -81 | 4.8 | TTATGAGATTTTCATCACACAT |
| Citrobacter koseri ATCC BAA-895 | CKO_03918 | -40 | 5.2 | TAATGTGATTTAAATCACGCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02919 | -88 | 5.6 | AAATGTGATTTATATCACACAT |
| Enterobacter sp. 638 | Ent638_3076 | -81 | 5.4 | ATGTGTGATTTAGATCACACAT |
| Erwinia amylovora ATCC 49946 | EAM_2617 | -83 | 5.2 | AAATGTGATTTCAATCACGATT |
| Serratia proteamaculans 568 | Spro_0882 | -83 | 4.8 | ATACGTGATTTTCATCACGCAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3349 | -86 | 4 | AAAAGCGATCAATCTCACGCTT |
| Edwardsiella tarda EIB202 | ETAE_2834 | -82 | 3.8 | ATCCGTGATTTTCCTCTCACAC |
| Proteus mirabilis HI4320 | PMI0391 | -82 | 4.6 | AAAAGTGATCTTGATCATGTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1266 | -87 | 5.1 | AATAGTGATTTAGATCACCTTT |
|
Position: -136
Score: 4.2 Sequence: TTTTTTTATACACAACACATAT
Locus tag: Spro_0952
|
||||
| Spro_0952 | -136 | 4.2 | TTTTTTTATACACAACACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yafK | ||||
| Ortholog function: hypothetical protein | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00238 | -208 | 3.7 | AAATGCGAGCTATTGCGCAAAG |
| Yersinia pestis KIM | y0949 | -217 | 3.7 | TTATTTTATACAAAACATATAT |
| Serratia proteamaculans 568 | Spro_0952 | -136 | 4.2 | TTTTTTTATACACAACACATAT |
| Proteus mirabilis HI4320 | PMI0351 | -297 | 3.7 | AATTGTTACTATTTTCTCTTAT |
| -228 | 3.7 | TCGAGTGATTTAGCTCAAGCAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1195 | -232 | 3.9 | TCAAGTGATTTAGTTCAAGCAA |
|
Position: -135
Score: 4.2 Sequence: ATCTGTGACCCCCTTAACAGAA
Locus tag: Spro_1090
|
||||
| Spro_1090 | -135 | 4.2 | ATCTGTGACCCCCTTAACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cyoA | ||||
| Ortholog function: cytochrome o ubiquinol oxidase subunit II | ||||
| Yersinia pestis KIM | y1021 | -137 | 4.5 | ATCTGTGACCCCCTTAACATAA |
| Serratia proteamaculans 568 | Spro_1090 | -135 | 4.2 | ATCTGTGACCCCCTTAACAGAA |
| Proteus mirabilis HI4320 | PMI0108 | -194 | 3.6 | AAATTATAGTTAATTCACAATA |
| -147 | 3.6 | TTAATTACTTGTGATCACATTA | ||
| -141 | 4.3 | ACTTGTGATCACATTAACACAA | ||
|
Position: -54
Score: 3.6 Sequence: TGCCGTGATATTCCGCACACTG
Locus tag: Spro_1111
|
||||
| Spro_1111 | -54 | 3.6 | TGCCGTGATATTCCGCACACTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tesB | ||||
| Ortholog function: Acyl-CoA thioesterase II (EC 3.1.2.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0452 | -138 | 3.9 | AAGTGTGGCACACATCACGCAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02706 | -135 | 3.9 | AAGTGTGGCATATCTCACTTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00415 | -139 | 3.8 | AAGTGTGGCACAGATCTCAGAT |
| Enterobacter sp. 638 | Ent638_0920 | -131 | 4 | AAGTGTGGCACATATCACTTAT |
| Yersinia pestis KIM | y1043 | -153 | 3.6 | TAGCGTGCTAATTATAGCATAA |
| Serratia proteamaculans 568 | Spro_1111 | -54 | 3.6 | TGCCGTGATATTCCGCACACTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1162 | -154 | 3.7 | TAGTATGATTCAATAAACACAA |
|
Position: -100
Score: 4.7 Sequence: TTTTGCGATGTGCGTCAAATTA
Locus tag: Spro_1146
|
||||
| Spro_1146 | -100 | 4.7 | TTTTGCGATGTGCGTCAAATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fsr | ||||
| Ortholog function: fosmidomycin resistance protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0479 | -65 | 3.7 | TAGTCTGGTAATAATCACAAAT |
| Salmonella typhimurium LT2 | STM0493 | -100 | 3.8 | AATTGAGACTTCCTTCAAACAC |
| Citrobacter koseri ATCC BAA-895 | CKO_02670 | -102 | 3.8 | AATTGAGACTTCCTTCAAACAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00460 | -197 | 3.8 | AATTGCGACTTCCTTCAAACCT |
| Enterobacter sp. 638 | Ent638_0958 | -92 | 4 | AATTGCGACTTTCCTCAAATCT |
| Serratia proteamaculans 568 | Spro_1146 | -100 | 4.7 | TTTTGCGATGTGCGTCAAATTA |
|
Position: -103
Score: 4.6 Sequence: TAATTTGACGCACATCGCAAAA
Locus tag: Spro_1147
|
||||
| Spro_1147 | -103 | 4.6 | TAATTTGACGCACATCGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ushA | ||||
| Ortholog function: UDP-sugar hydrolase (EC 3.6.1.45); 5'-nucleotidase (EC 3.1.3.5) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0480 | -174 | 4 | ATTTGTGATTATTACCAGACTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00461 | -125 | 3.9 | AATTATTATCCAACTAACATAC |
| -94 | 3.7 | AGGTTTGAAGGAAGTCGCAATT | ||
| Enterobacter sp. 638 | Ent638_0959 | -95 | 3.9 | AGATTTGAGGAAAGTCGCAATT |
| Serratia proteamaculans 568 | Spro_1147 | -103 | 4.6 | TAATTTGACGCACATCGCAAAA |
| Edwardsiella tarda EIB202 | ETAE_1034 | -139 | 4.4 | TTAGGTGAGTCACGTCACAATA |
| Proteus mirabilis HI4320 | PMI2177 | -111 | 3.7 | ATATATAACCTACGTCATAAAA |
|
Position: -276
Score: 4.5 Sequence: TGGTGTGATATCGGTTACATTT
Position: -82
Score: 4.6 Sequence: TAATGTGATCGCACTCACTTAC
Locus tag: Spro_1160
|
||||
| Spro_1160 | -276 | 4.5 | TGGTGTGATATCGGTTACATTT | |
| -82 | 4.6 | TAATGTGATCGCACTCACTTAC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galP | ||||
| Ortholog function: sugar transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2943 | -156 | 3.6 | TATGATGATATAACTCAATTAT |
| -82 | 4.9 | TGATGTGATTTGCTTCACATCT | ||
| Salmonella typhimurium LT2 | STM3091 | -83 | 4.6 | CATTGTGATTAGCCTCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_04318 | -83 | 5.3 | TAACGTGATTCGAATCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03376 | -84 | 3.8 | AGCCGTGATTATAGTCACGTTT |
| Enterobacter sp. 638 | Ent638_3347 | -171 | 3.9 | TATTGGGATGCACATCAACTCT |
| -102 | 3.7 | TAGTGTAACCGATTACACCAAT | ||
| -84 | 5.3 | CAATGTGATTTATCTCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2827 | -152 | 4.1 | TCATGTGATCTGTCGCACAGTC |
| Serratia proteamaculans 568 | Spro_1160 | -276 | 4.5 | TGGTGTGATATCGGTTACATTT |
| -100 | 3.6 | TTGTGTAATCGTTTCCACTAAT | ||
| -82 | 4.6 | TAATGTGATCGCACTCACTTAC | ||
| Edwardsiella tarda EIB202 | ETAE_2966 | -275 | 3.7 | CAAAGTGAAAACGATTACATTT |
| -61 | 4.5 | TTATGTGATCATGCGCACTTTA | ||
|
Position: -194
Score: 5.3 Sequence: TTTTGTGATTTACATCACCAAA
Locus tag: Spro_1227
|
||||
| Spro_1227 | -194 | 5.3 | TTTTGTGATTTACATCACCAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagB | ||||
| Ortholog function: Glucosamine-6-phosphate deaminase (EC 3.5.99.6) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0678 | -212 | 4.3 | AAATTTAATTCGTATCGCAAAT |
| -178 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Salmonella typhimurium LT2 | STM0684 | -205 | 3.7 | AAAATTAATTCGCCTCGCAAAT |
| -171 | 4.7 | TTTTGTGATTATAATCACTAAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02486 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 5.2 | TTTTGTGATTTGAATCACCAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00699 | -217 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -183 | 5 | TTTTGTGATAATTATCACCAAA | ||
| Enterobacter sp. 638 | Ent638_1193 | -218 | 3.8 | AAAATTAATTCGTATCGCAAAT |
| -184 | 4.6 | TTTTGTGAGTTTTGTCACCAAA | ||
| Erwinia amylovora ATCC 49946 | EAM_1147 | -195 | 4.9 | ATATGTGATTAAAGTCACCTTA |
| Yersinia pestis KIM | y1202 | -214 | 5.1 | TTTTGTGATAAATATCACCAAA |
| Serratia proteamaculans 568 | Spro_1227 | -194 | 5.3 | TTTTGTGATTTACATCACCAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1326 | -180 | 5 | TTATGTGATAAAAATCACCAAA |
| Edwardsiella tarda EIB202 | ETAE_2617 | -190 | 5 | ATTTGTGATAACTATCACCAAT |
| Proteus mirabilis HI4320 | PMI0454 | -217 | 4.9 | ATTTGTGATTAAAGTCACCTAT |
|
Position: -162
Score: 5.1 Sequence: TTTGGTGATGTAAATCACAAAA
Position: -44
Score: 3.9 Sequence: AAATATGATAAAGCTCATTAAA
Locus tag: Spro_1228
|
||||
| Spro_1228 | -162 | 5.1 | TTTGGTGATGTAAATCACAAAA | |
| -44 | 3.9 | AAATATGATAAAGCTCATTAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nagE | ||||
| Ortholog function: PTS system, N-acetylglucosamine-specific IIA component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIB component (EC 2.7.1.69) / PTS system, N-acetylglucosamine-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0679 | -176 | 4.4 | TTTGGTGACAAAACTCACAAAA |
| -142 | 4.2 | ATTTGCGATACGAATTAAATTT | ||
| Salmonella typhimurium LT2 | STM0685 | -177 | 4.8 | TTTAGTGATTATAATCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_02485 | -181 | 4.9 | TTTGGTGATTCAAATCACAAAA |
| -147 | 3.6 | ATTTGCGATACGAATTAATTTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00700 | -153 | 4.7 | TTTGGTGATAATTATCACAAAA |
| -119 | 3.6 | ATTTGCGATACGAATTAATTTT | ||
| Erwinia amylovora ATCC 49946 | EAM_1148 | -161 | 4.8 | TAAGGTGACTTTAATCACATAT |
| Serratia proteamaculans 568 | Spro_1228 | -162 | 5.1 | TTTGGTGATGTAAATCACAAAA |
| -44 | 3.9 | AAATATGATAAAGCTCATTAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1318 | -200 | 3.7 | AAATTTGAACCCGTTTACTATT |
| -132 | 3.9 | TATCGCTACAGTGATCACAATT | ||
|
Position: -253
Score: 4.3 Sequence: ATCCGTGATCTAAATCACTGTT
Locus tag: Spro_1263
|
||||
| Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdhC | ||||
| Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit | ||||
| Enterobacter sp. 638 | Ent638_1222 | -295 | 4.2 | TATCGTGACTGTGATCACTGTT |
| Erwinia amylovora ATCC 49946 | EAM_1168 | -249 | 4.4 | AAGTGTGATTTTTGTCACTGTT |
| -190 | 3.6 | TAATGAGATTGTGATCCACTTA | ||
| Yersinia pestis KIM | y3071 | -254 | 4.5 | AATCGTGATCCTAATCACTGTT |
| Serratia proteamaculans 568 | Spro_1263 | -253 | 4.3 | ATCCGTGATCTAAATCACTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1357 | -265 | 4.7 | ATTCGTGATCTAAATCACTGTT |
| Edwardsiella tarda EIB202 | ETAE_2588 | -261 | 3.7 | ATGCGTGACCGTTGTCACTGTT |
| Proteus mirabilis HI4320 | PMI0565 | -264 | 4.3 | AAAAGTGATCCCTCTCACTGTT |
|
Position: -319
Score: 3.6 Sequence: AAATTTGACCTGTAACCCAAAG
Position: -300
Score: 3.7 Sequence: AAGTCTAACCCACATCACGTAA
Locus tag: Spro_1271
|
||||
| Spro_1271 | -319 | 3.6 | AAATTTGACCTGTAACCCAAAG | |
| -300 | 3.7 | AAGTCTAACCCACATCACGTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cydA | ||||
| Ortholog function: cytochrome d terminal oxidase, polypeptide subunit I | ||||
| Serratia proteamaculans 568 | Spro_1271 | -300 | 3.7 | AAGTCTAACCCACATCACGTAA |
|
Position: -143
Score: 4 Sequence: TTTTTCGCTCTGGATCACCTTT
Locus tag: Spro_1292
|
||||
| Spro_1292 | -143 | 4 | TTTTTCGCTCTGGATCACCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galT | ||||
| Ortholog function: galactose-1-phosphate uridylyltransferase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0758 | -78 | 3.8 | TAATTTATTCCATGTCACACTT |
| Salmonella typhimurium LT2 | STM0775 | -78 | 3.7 | TAATTTATTACATGTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02377 | -36 | 3.7 | TAATATATTCCATGTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00772 | -78 | 3.7 | TAACTTGTGCTATGTCACACTT |
| -44 | 4.1 | ATATGCTATCTTCCTCACAAAC | ||
| Yersinia pestis KIM | y3044 | -163 | 3.7 | TTATTTGTCTATGCTCACAGAA |
| Serratia proteamaculans 568 | Spro_1292 | -143 | 4 | TTTTTCGCTCTGGATCACCTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3171 | -154 | 4 | TATAGTGAAACTGATTACATTG |
| Edwardsiella tarda EIB202 | ETAE_2565 | -195 | 3.7 | TAGTGTAAGCGATACCACAAAC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0575 | -120 | 4.3 | TTGCGTGATTGGTATCTCAGAT |
|
Position: -146
Score: 4.6 Sequence: TTAAGTGACGCAGAGCACAATA
Position: -20
Score: 3.7 Sequence: TTTTATGAGCGCCATCAATAAT
Locus tag: Spro_1330
|
||||
| Spro_1330 | -146 | 4.6 | TTAAGTGACGCAGAGCACAATA | |
| -20 | 3.7 | TTTTATGAGCGCCATCAATAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ybiH | ||||
| Ortholog function: putative transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0796 | -123 | 4.5 | TTTTGTGACGCAGCGCATAAAT |
| Salmonella typhimurium LT2 | STM0819 | -124 | 4.7 | TTTTGTGATGCGGCGCATAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02331 | -124 | 4.5 | TTTTGTGACATACCGCATAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00824 | -224 | 3.6 | AAATGAAACGGTATTCAAAAAA |
| -118 | 4.7 | AATTGTTAAGCCCATCACAAAT | ||
| Enterobacter sp. 638 | Ent638_1287 | -126 | 4.4 | TTTTGTGACACGGCGCATAAAA |
| Serratia proteamaculans 568 | Spro_1330 | -146 | 4.6 | TTAAGTGACGCAGAGCACAATA |
| Proteus mirabilis HI4320 | PMI0619 | -160 | 3.6 | AATTTTTAAATAAATCATGTTT |
|
Position: -104
Score: 3.5 Sequence: TTTTGCAGCACAGTTCACAAAT
Locus tag: Spro_1382
|
||||
| Spro_1382 | -104 | 3.5 | TTTTGCAGCACAGTTCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydeV | ||||
| Ortholog function: putative kinase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03509 | -75 | 3.7 | TTTTGCCAGTCGGCTCACACTT |
| Enterobacter sp. 638 | Ent638_3538 | -122 | 3.4 | TTTATTGATTAGGATCCAATTC |
| Serratia proteamaculans 568 | Spro_1382 | -104 | 3.5 | TTTTGCAGCACAGTTCACAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3141 | -137 | 4.3 | AATTGTGATCTTGGCAATATTT |
|
Position: -92
Score: 4.1 Sequence: AATTGTGACAACGATCGCTGAT
Locus tag: Spro_1492
|
||||
| Spro_1492 | -92 | 4.1 | AATTGTGACAACGATCGCTGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbJ | ||||
| Ortholog function: D-beta-hydroxybutyrate dehydrogenase (EC 1.1.1.30) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2736 | -90 | 4.9 | TTATGTGAATCAGATCACCATA |
| Salmonella typhimurium LT2 | STM2918 | -90 | 4 | TTTTGTGAAACAACTCACCGCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01605 | -91 | 5 | ATTCGTGATAACTCTCACATAT |
| Erwinia amylovora ATCC 49946 | EAM_1106 | -90 | 4.4 | TGATGTGAAGTTTATCACTAAT |
| Serratia proteamaculans 568 | Spro_1492 | -92 | 4.1 | AATTGTGACAACGATCGCTGAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4327 | -92 | 4.5 | TTATGTGATAAAAATCACCACA |
| Edwardsiella tarda EIB202 | ETAE_1922 | -93 | 3.9 | ATTTGTGAGGATAAACACGGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2507 | -147 | 3.8 | ATAAATAATATAAATCAAATAA |
| -90 | 3.7 | GAATGTGATAACCATCGTGTAT | ||
|
Position: -211
Score: 3.9 Sequence: ATCAGCGATCGTTGTCACAATT
Locus tag: Spro_1493
|
||||
| Spro_1493 | -211 | 3.9 | ATCAGCGATCGTTGTCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbI | ||||
| Ortholog function: Hypothetical transcriptional regulator ygbI | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2735 | -166 | 3.7 | TTGTTTGATATTGTGAATATAA |
| -127 | 5.2 | TATGGTGATCTGATTCACATAA | ||
| Salmonella typhimurium LT2 | STM2919 | -128 | 4 | TGCGGTGAGTTGTTTCACAAAA |
| -87 | 3.6 | TTTTGTGAAGGCAATCCTCATA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01606 | -271 | 3.6 | TAATGTGATTTAATGATAGAAT |
| -230 | 4.7 | ATATGTGAGAGTTATCACGAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_pKPN4p07051 | -233 | 3.6 | TAATGTGATTTAATGATAGAAT |
| -192 | 4.7 | TTATGTGAGAGTTATCACGAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_1104 | -238 | 4.5 | ATTAGTGATAAACTTCACATCA |
| Serratia proteamaculans 568 | Spro_1493 | -211 | 3.9 | ATCAGCGATCGTTGTCACAATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4325 | -267 | 4.8 | TGTGGTGATTTTTATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1921 | -132 | 3.9 | AACCGTGTTTATCCTCACAAAT |
|
Position: -121
Score: 4.3 Sequence: AATCTTGACCGGGTTCACGTTA
Locus tag: Spro_1560
|
||||
| Spro_1560 | -121 | 4.3 | AATCTTGACCGGGTTCACGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: folE | ||||
| Ortholog function: GTP cyclohydrolase I | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2153 | -101 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Salmonella typhimurium LT2 | STM2193 | -101 | 4 | TTATGTGCGCTACCTCACGCAC |
| Citrobacter koseri ATCC BAA-895 | CKO_00638 | -98 | 3.8 | TTATGTGCGCCGCCTCACGCAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02591 | -84 | 3.5 | TTCTGTGCGCCACCTCACGCAC |
| Enterobacter sp. 638 | Ent638_2753 | -84 | 3.9 | TTATGTGCGCCACCTCACGCAC |
| Serratia proteamaculans 568 | Spro_1560 | -121 | 4.3 | AATCTTGACCGGGTTCACGTTA |
| Proteus mirabilis HI4320 | PMI0639 | -86 | 4.9 | TAATGTGATTCAGCTCATCTAA |
|
Position: -84
Score: 3.5 Sequence: TCCTGTGACGGGATTCACGCAG
Locus tag: Spro_1562
|
||||
| Spro_1562 | -84 | 3.5 | TCCTGTGACGGGATTCACGCAG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: galS | ||||
| Ortholog function: Mgl repressor and galactose ultrainduction factor GalS, HTH-type transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2151 | -146 | 3.5 | GATAACGATCTGGATCACATTC |
| -95 | 3.9 | TGCTGTGACTCGATTCACGAAG | ||
| Salmonella typhimurium LT2 | STM2191 | -154 | 3.5 | GATAACGATCTGGATCACATTC |
| -103 | 3.5 | CCCTGTGATGTTTCTCACGCAG | ||
| -38 | 3.3 | ATTTGTGAGCATTTTTGAACTC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00640 | -157 | 3.5 | GATAACGATCTGGATCACATTC |
| -106 | 3.4 | CCCTGTGACCTTACTCACGTAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02589 | -160 | 3.3 | GATAACGATCTCGATCACAATC |
| -109 | 3.4 | CCGTGTGACCTCACTCACGCAG | ||
| -33 | 3.6 | TGACGTGCTGTAATTCTCTTAA | ||
| Enterobacter sp. 638 | Ent638_2751 | -160 | 3.4 | GATAACGATCTGGATCACAATC |
| -109 | 4.1 | CTGTGTGAGCTTCTTCACGTAG | ||
| Erwinia amylovora ATCC 49946 | EAM_2208 | -110 | 3.4 | GGCTGTGAGGTTTCTCACGTAG |
| Serratia proteamaculans 568 | Spro_1562 | -135 | 3.4 | AATTGAGATCTGGCGCAGGTAG |
| -84 | 3.5 | TCCTGTGACGGGATTCACGCAG | ||
|
Position: -229
Score: 4.4 Sequence: ATCTGTGAGAAAATTCACAGAT
Locus tag: Spro_1563
|
||||
| Spro_1563 | -229 | 4.4 | ATCTGTGAGAAAATTCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mglB | ||||
| Ortholog function: Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB (TC 3.A.1.2.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2150 | -270 | 4.5 | ATCTGTGAGTGATTTCACAGTA |
| Citrobacter koseri ATCC BAA-895 | CKO_00641 | -270 | 4.7 | ATATGTGAGTAAATTCACAGTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02588 | -239 | 4.8 | ATTTGTGAGTAAATTCACAGTA |
| Enterobacter sp. 638 | Ent638_2750 | -271 | 4.4 | ATCTGTGAGTAAATTCACAGTA |
| Yersinia pestis KIM | y2662 | -212 | 4.4 | ATCTGTGAGAAAATTCACAGTT |
| Serratia proteamaculans 568 | Spro_1563 | -229 | 4.4 | ATCTGTGAGAAAATTCACAGAT |
|
Position: -77
Score: 4.5 Sequence: TAAAGAGATTTACATCACACTT
Locus tag: Spro_1568
|
||||
| Spro_1568 | -77 | 4.5 | TAAAGAGATTTACATCACACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cdd | ||||
| Ortholog function: cytidine deaminase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2143 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 5.1 | TAATGAGATTCAGATCACATAT | ||
| Salmonella typhimurium LT2 | STM2183 | -128 | 4.2 | ATTTGCGATACGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTAGATCACATAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00646 | -128 | 4.3 | ATTTGCGATGCGTCGCGCATTT |
| -78 | 4.8 | CAATGAGATTTGGATCACATAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02584 | -78 | 4.4 | GAATGAGATATTCATCACATAT |
| Enterobacter sp. 638 | Ent638_2746 | -127 | 4.2 | ATTTGCGATGCGTCGCGCAATT |
| -77 | 4.9 | TAATGAGAACTGGATCACATAT | ||
| Erwinia amylovora ATCC 49946 | EAM_2202 | -124 | 3.9 | ACTTGCGATAAGTCTCTCATTT |
| -104 | 4.1 | TTTGGTGATGCATTTCATTTAT | ||
| -74 | 4.7 | TAGAGCGATTTAGATCACATAT | ||
| Yersinia pestis KIM | y2657 | -75 | 5 | TAATGAGATATAAATCACAATT |
| Serratia proteamaculans 568 | Spro_1568 | -127 | 4.1 | ACTTGCGATACATCTCGCAATT |
| -77 | 4.5 | TAAAGAGATTTACATCACACTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2830 | -130 | 4.6 | AATTGAGATACATCTCGCATTT |
| -79 | 4.5 | TAAAGAGATTCCGATCACAATT | ||
| Edwardsiella tarda EIB202 | ETAE_1162 | -76 | 4.9 | AAAAGTGATTATTATCACAAAT |
| Proteus mirabilis HI4320 | PMI0643 | -132 | 4.4 | ATTTGAGATGTATCTCCCAATT |
| -82 | 5.1 | AAATATGATTTTAATCACATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1547 | -75 | 4.7 | CTATATGATATTTATCACATTA |
|
Position: -62
Score: 4.3 Sequence: ATTTGTGGCGGAGGTCACAGTT
Locus tag: Spro_1570
|
||||
| Spro_1570 | -62 | 4.3 | ATTTGTGGCGGAGGTCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yohJ | ||||
| Ortholog function: LrgA family protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2141 | -68 | 4.9 | TAATGTGATCGGTAGCACGTTT |
| Salmonella typhimurium LT2 | STM2181 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_00648 | -68 | 4.6 | TGATGTGATCGGTAGCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02582 | -68 | 5 | TGATGTGATCGGTAGCACATTT |
| Enterobacter sp. 638 | Ent638_2744 | -68 | 4.7 | TGATGTGATCCGTAGCACGTTT |
| Yersinia pestis KIM | y2654 | -32 | 4.7 | TAGTGTGATGGGTAGCACAGAA |
| Serratia proteamaculans 568 | Spro_1570 | -62 | 4.3 | ATTTGTGGCGGAGGTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2828 | -69 | 4.5 | ATTCGTGATCTGTGGCACGTAA |
| Edwardsiella tarda EIB202 | ETAE_1164 | -68 | 4.9 | TGATGTGATCAGTAGCACATTT |
| Proteus mirabilis HI4320 | PMI0645 | -71 | 5.2 | TATTGTGATCCATAGCACACTT |
|
Position: -72
Score: 4.2 Sequence: ACATGTGTGCCACATCACAAAA
Locus tag: Spro_1608
|
||||
| Spro_1608 | -72 | 4.2 | ACATGTGTGCCACATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gnd | ||||
| Ortholog function: hypothetical protein | ||||
| Enterobacter sp. 638 | Ent638_2642 | -116 | 4 | CAGTGTGACATAGATCAGCAAA |
| Yersinia pestis KIM | y2629 | -78 | 3.8 | AGTTGTGCTATCTATCGCACCA |
| -76 | 3.6 | TTGTGCTATCTATCGCACCAAT | ||
| Serratia proteamaculans 568 | Spro_1608 | -297 | 3.7 | ATGCTTGAAGTGGCTCTCACTT |
| -72 | 4.2 | ACATGTGTGCCACATCACAAAA | ||
| Proteus mirabilis HI4320 | PMI0655 | -71 | 4.7 | CTATGTGATCAGGTTAACAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1560 | -74 | 4.4 | ACATGTGATCACATTAACAAAT |
|
Position: -307
Score: 3.9 Sequence: ATTTGAGAGCATGATCACGGTT
Locus tag: Spro_1630
|
||||
| Spro_1630 | -307 | 3.9 | ATTTGAGAGCATGATCACGGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sdaC | ||||
| Ortholog function: Serine transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2796 | -179 | 4.2 | ATTTGAGATCAAGATCACTGAT |
| Salmonella typhimurium LT2 | STM2970 | -176 | 4.2 | ATTTGAGATCGGGATCACTGAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04152 | -176 | 4.1 | ATTTGGGATCGCGATCACTGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03139 | -158 | 4.2 | ATTTGAGATCGCGATCACTGAT |
| Enterobacter sp. 638 | Ent638_3249 | -176 | 4.1 | ATTTGGGATCAGGATCACTGAT |
| Erwinia amylovora ATCC 49946 | EAM_1294 | -300 | 3.6 | ATTTGTTAAAAATCGCAAAAAA |
| -180 | 3.9 | AAATGTGATTCCGATCACCGGC | ||
| Yersinia pestis KIM | y2862 | -286 | 4.3 | AATTGAGATCACGATCACGGTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3158 | -195 | 3.7 | TTCTGTGATCGCCTCAATATTA |
| Proteus mirabilis HI4320 | PMI0672 | -283 | 4.3 | ATTTGAGATGGTGATCACGGTA |
|
Position: -205
Score: 4 Sequence: TAGCGTTACCTGCTTCAAACTT
Position: -49
Score: 3.9 Sequence: TTCAGTTATTCATCTCACCTAA
Locus tag: Spro_1672
|
||||
| Spro_1672 | -205 | 4 | TAGCGTTACCTGCTTCAAACTT | |
| -49 | 3.9 | TTCAGTTATTCATCTCACCTAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: cspD | ||||
| Ortholog function: cold shock-like protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0880 | -180 | 4 | TAGCGTTAACTGCTTCAAATTT |
| Salmonella typhimurium LT2 | STM0943 | -181 | 4 | TAGCGTTAACTGCTTCAAATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02200 | -210 | 3.9 | ATCCGCGACATCTGTCACATTA |
| -181 | 4 | TAGCGTTAACTGCTTCAAATTT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00913 | -270 | 4.2 | AGAGGTTATGCTCATCACAAAT |
| -180 | 4 | TAGCGTTAACTGCTTCAAATTT | ||
| Enterobacter sp. 638 | Ent638_1397 | -209 | 3.8 | ATCCGCGATATCTGTCACATTC |
| -180 | 3.9 | TAGCGTTAACTGCTTCAAAAAT | ||
| Serratia proteamaculans 568 | Spro_1672 | -205 | 4 | TAGCGTTACCTGCTTCAAACTT |
| -49 | 3.9 | TTCAGTTATTCATCTCACCTAA | ||
| Proteus mirabilis HI4320 | PMI0688 | -163 | 3.8 | AAGCGTTAGCTACATCAAAGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1592 | -194 | 4.6 | TATCGTTATCTATATCAAACTT |
|
Position: -176
Score: 3.6 Sequence: AAGTTTGAAGCAGGTAACGCTA
Locus tag: Spro_1673
|
||||
| Spro_1673 | -176 | 3.6 | AAGTTTGAAGCAGGTAACGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: clpS | ||||
| Ortholog function: ATP-dependent Clp protease adaptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0881 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| Salmonella typhimurium LT2 | STM0944 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -104 | 3.6 | AGATGTTAGTTATCTATCAATT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02199 | -164 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -135 | 4.2 | TAATGTGACAGATGTCGCGGAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00914 | -167 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -77 | 4.3 | ATTTGTGATGAGCATAACCTCT | ||
| Enterobacter sp. 638 | Ent638_1398 | -161 | 3.9 | ATTTTTGAAGCAGTTAACGCTA |
| -132 | 3.8 | GAATGTGACAGATATCGCGGAT | ||
| Erwinia amylovora ATCC 49946 | EAM_1320 | -161 | 4 | AAATTTGAAGCAGTTAACGCTA |
| -132 | 4.5 | TTTTGTGATAGAGGTCGCTATT | ||
| Serratia proteamaculans 568 | Spro_1673 | -176 | 3.6 | AAGTTTGAAGCAGGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_2208 | -164 | 3.8 | AAGTTTGAGGCAGTTAACGCAA |
| -144 | 3.6 | AATTGTGCGGCAGTGCGCTTTT | ||
| Proteus mirabilis HI4320 | PMI0689 | -268 | 3.7 | TGTCTTTATTTACTTAACATTA |
| -148 | 4.1 | AACTTTGATGTAGCTAACGCTT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1593 | -170 | 4.3 | AAGTTTGATATAGATAACGATA |
|
Position: -195
Score: 3.8 Sequence: TTTTTAGAGCTTTATCACATCA
Locus tag: Spro_1754
|
||||
| Spro_1754 | -195 | 3.8 | TTTTTAGAGCTTTATCACATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompA | ||||
| Ortholog function: outer membrane protein A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0957 | -188 | 4 | ATGCCTGACGGAGTTCACACTT |
| Salmonella typhimurium LT2 | STM1070 | -188 | 4.3 | ATGTCTGACGGAGTTCACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02111 | -164 | 4 | ATGCCTGACGGAGTTCACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00986 | -185 | 3.9 | ATGCCTGACAGAGTTCACACTT |
| Enterobacter sp. 638 | Ent638_1469 | -189 | 4 | ATGCCTGACGGAGTTCACACTT |
| Serratia proteamaculans 568 | Spro_1754 | -195 | 3.8 | TTTTTAGAGCTTTATCACATCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1751 | -200 | 3.9 | TCTTATGACACAAATCACATCA |
| Edwardsiella tarda EIB202 | ETAE_1267 | -196 | 3.7 | TTTGGTGAGCATAATCACATCG |
|
Position: -132
Score: 5.1 Sequence: TTACGTGATTCGCATCACACAA
Locus tag: Spro_1860
|
||||
| Spro_1860 | -132 | 5.1 | TTACGTGATTCGCATCACACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: proP | ||||
| Ortholog function: L-Proline/Glycine betaine transporter ProP | ||||
| Salmonella typhimurium LT2 | STM4290 | -235 | 5.2 | ATGTGTGAAGTTGATCACATAT |
| Serratia proteamaculans 568 | Spro_1860 | -132 | 5.1 | TTACGTGATTCGCATCACACAA |
|
Position: -164
Score: 4.4 Sequence: AAACGTGACTGTCATCAAACAT
Locus tag: Spro_1914
|
||||
| Spro_1914 | -164 | 4.4 | AAACGTGACTGTCATCAAACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsG | ||||
| Ortholog function: PTS system, glucose-specific IIB component (EC 2.7.1.69) / PTS system, glucose-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1101 | -154 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Salmonella typhimurium LT2 | STM1203 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01957 | -229 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01099 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Enterobacter sp. 638 | Ent638_1616 | -155 | 4.4 | AAACGTGATAGCCGTCAAACAA |
| Erwinia amylovora ATCC 49946 | EAM_1466 | -162 | 4.6 | AAACGTGATAGCCATCAAACAA |
| Yersinia pestis KIM | y1767 | -166 | 4.4 | AAACGTGACGGCAATCAAACAT |
| Serratia proteamaculans 568 | Spro_1914 | -164 | 4.4 | AAACGTGACTGTCATCAAACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1805 | -162 | 4.6 | AAACGTGATAGCAATCAAACAT |
| Proteus mirabilis HI4320 | PMI2292 | -156 | 4.5 | AAACGTGACAGCTATCATATAT |
|
Position: -224
Score: 3.9 Sequence: AACTGTGATCTCGCGCTAACTA
Position: -153
Score: 4.3 Sequence: AAGTTTGATGTACATCAATTTT
Locus tag: Spro_1926
|
||||
| Spro_1926 | -224 | 3.9 | AACTGTGATCTCGCGCTAACTA | |
| -153 | 4.3 | AAGTTTGATGTACATCAATTTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1109 | -154 | 3.9 | AAACTTGATTAACATCAATTTT |
| Salmonella typhimurium LT2 | STM1211 | -154 | 4.1 | AAACTTGATGCACATCAATTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01106 | -152 | 4.1 | AAACTTGATGCACATCAATTTT |
| Enterobacter sp. 638 | Ent638_1624 | -153 | 4 | AAACTTGATTCATATCAATTTT |
| Erwinia amylovora ATCC 49946 | EAM_1473 | -55 | 3.7 | TAAGGTTATTTTATTAACCTTT |
| Yersinia pestis KIM | y1777 | -152 | 3.8 | AAAGTTGATATATATCAATTTT |
| Serratia proteamaculans 568 | Spro_1926 | -153 | 4.3 | AAGTTTGATGTACATCAATTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1815 | -153 | 4 | TAAATTGATATATATCAATTTT |
| Edwardsiella tarda EIB202 | ETAE_2070 | -166 | 4.3 | TTATTTGATTTGAATCAATTTT |
| Proteus mirabilis HI4320 | PMI0875 | -157 | 4.6 | TTTTTTGATATAAATCAACTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2821 | -154 | 3.8 | GAATTTGATGTTGTTCAATTTT |
|
Position: -95
Score: 3.6 Sequence: TTTTGTGATCCCGTCGGCATTG
Locus tag: Spro_1973
|
||||
| Spro_1973 | -95 | 3.6 | TTTTGTGATCCCGTCGGCATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ebgA | ||||
| Ortholog function: cryptic beta-D-galactosidase, alpha subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3076 | -129 | 4.3 | TTTCGTGATCCAGTTAAAGTAA |
| Serratia proteamaculans 568 | Spro_1973 | -95 | 3.6 | TTTTGTGATCCCGTCGGCATTG |
| -63 | 3.5 | TTCTGTGAATTTTACTAAATAT | ||
|
Position: -117
Score: 4.2 Sequence: ATTTGTGATCGCCTACGCAATC
Locus tag: Spro_1985
|
||||
| Spro_1985 | -117 | 4.2 | ATTTGTGATCGCCTACGCAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychH | ||||
| Ortholog function: membrane protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1205 | -105 | 4.5 | AATTGTGATCACGCCCGCACAT |
| Salmonella typhimurium LT2 | STM1782 | -105 | 4.4 | ATTTGTGATCGCACCCGCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01260 | -104 | 4.1 | AATTGTGATCGCCCACGCACTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02241 | -100 | 4.1 | TAATGTGATCGTGGACGCACTC |
| Enterobacter sp. 638 | Ent638_2343 | -119 | 3.7 | TGTTGTGACGAGAGTCATTAAT |
| -101 | 4 | TAATGTGATCATTCACGCAACT | ||
| Erwinia amylovora ATCC 49946 | EAM_1581 | -97 | 3.9 | AAATGTGATCGCTGACTCATCA |
| Yersinia pestis KIM | y2296 | -145 | 3.9 | AGTTGTGATCGCTACCGCAACA |
| Serratia proteamaculans 568 | Spro_1985 | -117 | 4.2 | ATTTGTGATCGCCTACGCAATC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2185 | -275 | 3.6 | TAGCGTGATTATGAGAACGCTA |
| -117 | 3.8 | ATCTGTGATCCCTCCCGCAATC | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2065 | -189 | 4.1 | AGTTGTGATCGTGTCCGCAATG |
|
Position: -188
Score: 4.1 Sequence: CGTCGTGAAGAAGATCACACAT
Locus tag: Spro_2009
|
||||
| Spro_2009 | -188 | 4.1 | CGTCGTGAAGAAGATCACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pepT | ||||
| Ortholog function: peptidase T | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1127 | -73 | 3.6 | AAAAGTGACCTGACGCAATATT |
| Salmonella typhimurium LT2 | STM1227 | -73 | 3.6 | AAAAGTGACCTGACGCAATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01926 | -73 | 3.6 | AAAAGTGACCTGACGCAATATT |
| Enterobacter sp. 638 | Ent638_1640 | -31 | 3.6 | AAAAGTGACCTGACGCAATATT |
| Yersinia pestis KIM | y1791 | -27 | 3.7 | ATATTTGATCATGATCACTTCC |
| Serratia proteamaculans 568 | Spro_2009 | -188 | 4.1 | CGTCGTGAAGAAGATCACACAT |
|
Position: -189
Score: 3.6 Sequence: AAATGTGAACGCAATCGATTAC
Locus tag: Spro_2072
|
||||
| Spro_2072 | -189 | 3.6 | AAATGTGAACGCAATCGATTAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tsx | ||||
| Ortholog function: Nucleoside-specific channel-forming protein Tsx precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0411 | -250 | 3.7 | TTTTGTTACTCTGCTTACATCA |
| -129 | 3.9 | AACTGTGAAACGAAACATATTT | ||
| Salmonella typhimurium LT2 | STM0413 | -129 | 4 | ATATGTGAAACAAGACATATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_02750 | -131 | 3.7 | ATCTGTGAAACAAGACATATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00363 | -131 | 3.8 | TTATGTGAAACAACACGTATTT |
| Enterobacter sp. 638 | Ent638_0879 | -124 | 4.1 | ATATGTGAAACAACACATATTT |
| Erwinia amylovora ATCC 49946 | EAM_2589 | -218 | 5.3 | ATTTGTGATAAAAATCACACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3796 | -172 | 5.5 | TTATGTGATTAAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_2935 | -245 | 4.6 | TAATTTGATGAGAATCTCAATT |
|
Position: -98
Score: 4.7 Sequence: TTTTGTGATTAACATCGCAATC
Locus tag: Spro_2083
|
||||
| Spro_2083 | -98 | 4.7 | TTTTGTGATTAACATCGCAATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: scrT | ||||
| Ortholog function: Sucrose permease, major facilitator superfamily | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03262 | -135 | 4.4 | ATTTTTGATCGCGATCGCATCT |
| -94 | 5.1 | TTTTGTGATTAACATCATATAT | ||
| -46 | 3.6 | TTTTGTTAACGTTACCATAATT | ||
| Serratia proteamaculans 568 | Spro_2083 | -139 | 4.1 | TTCGGTGATTTCGATCACACTC |
| -98 | 4.7 | TTTTGTGATTAACATCGCAATC | ||
| Proteus mirabilis HI4320 | PMI0850 | -223 | 3.7 | AAACGTGAAATATCTAATGAAT |
| -141 | 4.4 | AATAGCGATCTATCGCACATAA | ||
| -100 | 4.4 | TTTAGTGCGTTAAATCACATAA | ||
|
Position: -99
Score: 3.5 Sequence: ATAAGTGAGCCGTTACGCAAAC
Locus tag: Spro_2123
|
||||
| Spro_2123 | -99 | 3.5 | ATAAGTGAGCCGTTACGCAAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tcyP | ||||
| Ortholog function: L-cystine uptake protein TcyP | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1729 | -90 | 3.9 | ATATAAGAGCCAGCTCACAGTT |
| Salmonella typhimurium LT2 | STM1320 | -91 | 3.9 | ATATAAGAGCCAGCTCACAGTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01755 | -90 | 3.7 | ATATAAGAGGTCGGTCACAGTT |
| Yersinia pestis KIM | y1878 | -166 | 3.6 | TGATTTGATTTAATACAAATCA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2410 | -176 | 3.7 | TGACGTTATCTGCTGCACCCAT |
|
Position: -135
Score: 3.9 Sequence: TTTTGTGCTTTTTTTAGCGATT
Position: -70
Score: 3.6 Sequence: TTACGTTATTGTGATCGCCATC
Position: -64
Score: 4.3 Sequence: TATTGTGATCGCCATCACTTCC
Locus tag: Spro_2172
|
||||
| Spro_2172 | -135 | 3.9 | TTTTGTGCTTTTTTTAGCGATT | |
| -70 | 3.6 | TTACGTTATTGTGATCGCCATC | ||
| -64 | 4.3 | TATTGTGATCGCCATCACTTCC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aroH | ||||
| Ortholog function: phospho-2-dehydro-3-deoxyheptonate aldolase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1704 | -106 | 4.3 | AGGTGTGACACACCTCGCACTT |
| -64 | 4 | TATCGTGATGCGCATCACTTCC | ||
| Salmonella typhimurium LT2 | STM1347 | -106 | 4.3 | AGGTGTGACACGCCTCGCACTT |
| -64 | 4 | TATCGTGATGCCCATCACTTCC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_01728 | -115 | 4.3 | AGGTGTGAAACGCCTCGCATTT |
| -64 | 4.3 | TATTGTGATGCCCATCACTTCC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02162 | -63 | 4 | TATCGTGATGCGCATCACTTCC |
| Enterobacter sp. 638 | Ent638_1743 | -126 | 3.6 | AGTTATGATCGCTTTCACTCTC |
| -62 | 3.6 | TAAGGTGATGCCCATCACTTCC | ||
| Yersinia pestis KIM | y1928 | -64 | 4.3 | TATTGTGATCGCCATCACTTCC |
| Serratia proteamaculans 568 | Spro_2172 | -135 | 3.9 | TTTTGTGCTTTTTTTAGCGATT |
| -64 | 4.3 | TATTGTGATCGCCATCACTTCC | ||
| Edwardsiella tarda EIB202 | ETAE_1792 | -63 | 4 | TATCGTGATCCCCATCACTTCC |
| Proteus mirabilis HI4320 | PMI1423 | -55 | 3.9 | TATTGTGATCTTAATCACTGGG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2630 | -62 | 3.8 | TATTGTAATTTCCATTATCTAT |
|
Position: -55
Score: 3.6 Sequence: TTGTGTAATACTTGTAACGCTA
Locus tag: Spro_2186
|
||||
| Spro_2186 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: lpp | ||||
| Ortholog function: major outer membrane lipoprotein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1677 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Salmonella typhimurium LT2 | STM1377 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01710 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02134 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Enterobacter sp. 638 | Ent638_1767 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia amylovora ATCC 49946 | EAM_1656 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Serratia proteamaculans 568 | Spro_2186 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1866 | -56 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Edwardsiella tarda EIB202 | ETAE_1852 | -55 | 3.6 | TTGTGTAATACTTGTAACGCTA |
| Proteus mirabilis HI4320 | PMI1409 | -200 | 4.4 | TTTTGTGAAATAACACGCATTT |
|
Position: -173
Score: 3.5 Sequence: AAATGTTATTCTGAGCATATGT
Locus tag: Spro_2198
|
||||
| Spro_2198 | -173 | 3.5 | AAATGTTATTCTGAGCATATGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydhD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1654 | -132 | 3.6 | ATATTTGAAATGCAACAAATAG |
| Enterobacter sp. 638 | Ent638_1793 | -186 | 3.6 | TGAAGCGCTTTTGCTCACACTA |
| Erwinia amylovora ATCC 49946 | EAM_1665 | -145 | 3.9 | AAATGTTATTTTGTTATCATCT |
| Proteus mirabilis HI4320 | PMI1394 | -292 | 3.6 | TAATGTGCATTTATACACTTAT |
|
Position: -132
Score: 3.9 Sequence: ACTTATGACAGCCGTCACAAAA
Locus tag: Spro_2244
|
||||
| Spro_2244 | -132 | 3.9 | ACTTATGACAGCCGTCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araB | ||||
| Ortholog function: L-ribulokinase | ||||
| Erwinia amylovora ATCC 49946 | EAM_1697 | -131 | 4.1 | ACATATGAAGGCCATCACATAA |
| Yersinia pestis KIM | y2095 | -146 | 4.3 | ACTTTTGACTGACATCACAAAA |
| Serratia proteamaculans 568 | Spro_2244 | -132 | 3.9 | ACTTATGACAGCCGTCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2274 | -133 | 3.9 | ACCTTTGACCAGCTTCACAAAA |
|
Position: -251
Score: 3.8 Sequence: TTTTGTGACGGCTGTCATAAGT
Locus tag: Spro_2245
|
||||
| Spro_2245 | -251 | 3.8 | TTTTGTGACGGCTGTCATAAGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araF | ||||
| Ortholog function: L-arabinose-binding periplasmic protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1901 | -163 | 4.2 | CGATGTGATATTGCTCTCCTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_01050 | -164 | 4 | CGGTGTGATGCCGCTCTCCTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02396 | -161 | 4 | CGATGTGATAATGCTCTCGTAT |
| -72 | 3.6 | TGTTTTGATGACGATTAAATTG | ||
| Enterobacter sp. 638 | Ent638_2476 | -162 | 3.7 | CGGTGTGATGGCGCTCTCTTAT |
| Erwinia amylovora ATCC 49946 | EAM_1698 | -251 | 4.3 | TTATGTGATGGCCTTCATATGT |
| Yersinia pestis KIM | y2096 | -283 | 4.3 | TTTTGTGATGTCAGTCAAAAGT |
| Serratia proteamaculans 568 | Spro_2245 | -251 | 3.8 | TTTTGTGACGGCTGTCATAAGT |
|
Position: -111
Score: 4.8 Sequence: ATTTGTGCAGCAAATCACATAA
Locus tag: Spro_2283
|
||||
| Spro_2283 | -111 | 4.8 | ATTTGTGCAGCAAATCACATAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mlc | ||||
| Ortholog function: ROK family transcriptional regulatory protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1594 | -108 | 4.1 | AAATGTGCTGTTAATCACATGC |
| Salmonella typhimurium LT2 | STM1488 | -65 | 3.8 | AGTATTGAAGTGTTTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01593 | -107 | 3.6 | AAaTGTGcagTAaATCACAcgg |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01574 | -104 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Enterobacter sp. 638 | Ent638_1919 | -107 | 3.8 | AAATGTGCGGTAAATCACAAGG |
| Erwinia amylovora ATCC 49946 | EAM_1710 | -143 | 4.9 | TTATGTGCTGTAAATCACATTC |
| Yersinia pestis KIM | y2110 | -146 | 4.8 | TTATGTGCAGCAAATCACATAA |
| Serratia proteamaculans 568 | Spro_2283 | -111 | 4.8 | ATTTGTGCAGCAAATCACATAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2258 | -226 | 4.4 | ATATGCGCGCTAAATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1713 | -113 | 4.8 | ATTTGTGCACTTAATCACATAA |
| Proteus mirabilis HI4320 | PMI1292 | -126 | 4.7 | ATATGTGCTTTCCATCACGATT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2226 | -119 | 4.8 | TTTCGTGCTGAATATCACATAT |
|
Position: -81
Score: 5 Sequence: CAATGTGACGCAGATCACACTA
Locus tag: Spro_2355
|
||||
| Spro_2355 | -81 | 5 | CAATGTGACGCAGATCACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjcB | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4060 | -149 | 5.7 | AATTGTGATATAGTTCACAAAA |
| Salmonella typhimurium LT2 | STM4263 | -149 | 5.7 | TTTTGTGATATAGTTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03830 | -150 | 5.7 | TATTGTGATATAGTTCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04460 | -143 | 5.4 | AAGTGTGATATAGTTCACACAA |
| Enterobacter sp. 638 | Ent638_0263 | -82 | 5.3 | AAACGTGATATAGTTCACACAT |
| Serratia proteamaculans 568 | Spro_2355 | -81 | 5 | CAATGTGACGCAGATCACACTA |
|
Position: -225
Score: 3.5 Sequence: CGTTGCGACATGGGACACAAAA
Locus tag: Spro_2410
|
||||
| Spro_2410 | -225 | 3.5 | CGTTGCGACATGGGACACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aldB | ||||
| Ortholog function: Aldehyde dehydrogenase B (EC 1.2.1.22) | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02991 | -205 | 4.4 | TGTTGCGATTTGCAACACATAA |
| Serratia proteamaculans 568 | Spro_2410 | -225 | 3.5 | CGTTGCGACATGGGACACAAAA |
|
Position: -76
Score: 3.4 Sequence: TTTTGTGTCCCATGTCGCAACG
Locus tag: Spro_2411
|
||||
| Spro_2411 | -76 | 3.4 | TTTTGTGTCCCATGTCGCAACG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: prpR | ||||
| Ortholog function: Propionate catabolism operon regulatory protein PrpR | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02992 | -81 | 4.1 | TTATGTGTTGCAAATCGCAACA |
| Serratia proteamaculans 568 | Spro_2411 | -76 | 3.4 | TTTTGTGTCCCATGTCGCAACG |
|
Position: -76
Score: 3.6 Sequence: TTTAGCGACATGGGTCAACTTT
Locus tag: Spro_2451
|
||||
| Spro_2451 | -76 | 3.6 | TTTAGCGACATGGGTCAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dsdC | ||||
| Ortholog function: DNA-binding transcriptional dual regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2364 | -115 | 3.9 | TGGAGTGATTTACATCTAAAAA |
| -85 | 4.6 | AATTGAGATATGGTTCACTTTA | ||
| Salmonella typhimurium LT2 | STM3800 | -142 | 3.8 | TGATGTAAATTGAATCAACTAT |
| -124 | 4.5 | CTATGTGATTTCCATCTAATAT | ||
| -94 | 4.2 | TTTTGCGATATGGTTCATTTTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00019 | -32 | 3.9 | AAGGGTGATTTGCATCCAATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04079 | -125 | 3.9 | AAAGGTGATTTAGCTCTAAAAG |
| -95 | 4.2 | AAATATGCTATGGGTCAAATTA | ||
| Serratia proteamaculans 568 | Spro_2451 | -76 | 3.6 | TTTAGCGACATGGGTCAACTTT |
| Proteus mirabilis HI4320 | PMI0184 | -199 | 3.6 | TATTGTTAAACATATTGAATAT |
| -117 | 4.4 | ATAGGTGATCAGATGCACAAAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1968 | -124 | 4.4 | TTCAGTGATACCGATCAAAATT |
| -94 | 4.5 | ATTTGCGATTTAAATCACTAAA | ||
|
Position: -123
Score: 3.7 Sequence: TAAATTGACGAGCATCATCTTT
Locus tag: Spro_2515
|
||||
| Spro_2515 | -123 | 3.7 | TAAATTGACGAGCATCATCTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dsdA | ||||
| Ortholog function: D-serine dehydratase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2366 | -154 | 4.4 | TAAAGTGAACCATATCTCAATT |
| Salmonella typhimurium LT2 | STM3802 | -153 | 4 | TAAAATGAACCATATCGCAAAA |
| -123 | 4.2 | ATATTAGATGGAAATCACATAG | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00021 | -124 | 4 | TTATTGGATGCAAATCACCCTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04081 | -152 | 4.3 | TAATTTGACCCATAGCATATTT |
| -122 | 3.7 | CTTTTAGAGCTAAATCACCTTT | ||
| Serratia proteamaculans 568 | Spro_2515 | -123 | 3.7 | TAAATTGACGAGCATCATCTTT |
| Proteus mirabilis HI4320 | PMI0187 | -126 | 4.4 | ATTTGTGCATCTGATCACCTAT |
| -44 | 3.6 | ATATTCAATATGTTTAACAATA | ||
|
Position: -260
Score: 3.5 Sequence: TAATGTGAGGCTCCCCTCACCA
Locus tag: Spro_2594
|
||||
| Spro_2594 | -260 | 3.5 | TAATGTGAGGCTCCCCTCACCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ydgD | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1598 | -93 | 4 | TTATCTGATTTTACTCCCACTT |
| Salmonella typhimurium LT2 | STM1484 | -93 | 4 | TTATCTGATTTTACTCCCACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_01604 | -95 | 4 | TTATCTGATTTTACTCCCACTT |
| Enterobacter sp. 638 | Ent638_1914 | -53 | 4.1 | TATTTTAATAGGGTTCACTTTT |
| Yersinia pestis KIM | y2013 | -160 | 3.6 | TTTTTTTATTTATAGCACGAAC |
|
Position: -88
Score: 4.7 Sequence: TGATTTGATTTCGATCAAATAT
Locus tag: Spro_2640
|
||||
| Spro_2640 | -88 | 4.7 | TGATTTGATTTCGATCAAATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fsaB | ||||
| Ortholog function: fructose 6-phosphate aldolase 2 | ||||
| Yersinia pestis KIM | y2074 | -103 | 4.3 | TATTTTGATAAGAATAACGTTA |
| Serratia proteamaculans 568 | Spro_2640 | -88 | 4.7 | TGATTTGATTTCGATCAAATAT |
|
Position: -135
Score: 3.8 Sequence: TTTTTTGATTCAGATCAATCCT
Locus tag: Spro_2674
|
||||
| Spro_2674 | -135 | 3.8 | TTTTTTGATTCAGATCAATCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ompW | ||||
| Ortholog function: outer membrane protein W | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1256 | -166 | 4.9 | AAAATTGATTTAAATCACATTA |
| -82 | 3.8 | TAATGTGATCTATGTAGGATCA | ||
| Salmonella typhimurium LT2 | STM1732 | -82 | 4.2 | AAATGTGATCTGTATTAGATCA |
| Citrobacter koseri ATCC BAA-895 | CKO_01333 | -82 | 3.9 | TAATGTGATCTGTATTGGATCA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01248 | -101 | 3.9 | CATTGCGATCGGTAGCAAAAAT |
| -45 | 4 | TAGTGTGATCTAAAACAGATCA | ||
| Enterobacter sp. 638 | Ent638_2283 | -121 | 3.7 | AAAATTAATCTGGATCAACAAA |
| Yersinia pestis KIM | y2044 | -69 | 3.9 | AGATGTGATCTCGATTAGATCA |
| Serratia proteamaculans 568 | Spro_2674 | -135 | 3.8 | TTTTTTGATTCAGATCAATCCT |
| Edwardsiella tarda EIB202 | ETAE_1528 | -161 | 3.9 | CTGATTGATGTCTATCAAATTT |
| Proteus mirabilis HI4320 | PMI1350 | -168 | 4.6 | AAATTTGATGTGGATCAATTAT |
| -85 | 3.8 | AGTTGTGATCGGCATTAGATCA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2478 | -164 | 4.3 | AACTTTGATTTGGATCAAGTTA |
| -39 | 3.8 | TATTTTGATTGACTTTAAATCA | ||
|
Position: -82
Score: 4.3 Sequence: AATTGTGAACCCGATCACTTCA
Locus tag: Spro_2681
|
||||
| Spro_2681 | -82 | 4.3 | AATTGTGAACCCGATCACTTCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhfC | ||||
| Ortholog function: Predicted purine nucleoside transporter, MFS superfamily | ||||
| Salmonella typhimurium LT2 | STM3473 | -137 | 5 | TGATGTGACAAACATCACATTA |
| -84 | 3.8 | ATTATTTAAATGCATCACAAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03750 | -140 | 5.3 | AAGCGTGATGCAGATCACATTA |
| -109 | 3.7 | AAAGATAACCCATTTCACAATA | ||
| Enterobacter sp. 638 | Ent638_3791 | -206 | 4.8 | AAAAGTGACTTAGATCACATTG |
| Serratia proteamaculans 568 | Spro_2681 | -82 | 4.3 | AATTGTGAACCCGATCACTTCA |
|
Position: -268
Score: 5.2 Sequence: TTTTGTGATTTAAATCATAAAA
Locus tag: Spro_2703
|
||||
| Spro_2703 | -268 | 5.2 | TTTTGTGATTTAAATCATAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ychE | ||||
| Ortholog function: putative channel protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1242 | -257 | 5.1 | TTACGTGATCCAAATCAAATTT |
| Salmonella typhimurium LT2 | STM1748 | -256 | 4.8 | TTGTGTGATCTAAATCAAGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01319 | -167 | 5 | TTGCGTGATCCAGATCAAATTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02198 | -261 | 4.8 | TTACGTGATTTAGATCAAGTAT |
| Enterobacter sp. 638 | Ent638_2303 | -256 | 4 | AAACATGATCTGAATCAATTTA |
| Erwinia amylovora ATCC 49946 | EAM_1899 | -158 | 3.8 | AAAGATGATGCAGATCATCAAT |
| Serratia proteamaculans 568 | Spro_2703 | -268 | 5.2 | TTTTGTGATTTAAATCATAAAA |
| Proteus mirabilis HI4320 | PMI1485 | -290 | 5.3 | TAAAGTGATCTACATCACAATA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2495 | -295 | 4.9 | TATATTGATCTTAATCACATAA |
|
Position: -278
Score: 5.1 Sequence: TTTTATGATTTAAATCACAAAA
Locus tag: Spro_2704
|
||||
| Spro_2704 | -278 | 5.1 | TTTTATGATTTAAATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: adhE | ||||
| Ortholog function: Alcohol dehydrogenase (EC 1.1.1.1); Acetaldehyde dehydrogenase (EC 1.2.1.10) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1241 | -241 | 5 | AAATTTGATTTGGATCACGTAA |
| Salmonella typhimurium LT2 | STM1749 | -242 | 4.9 | AATCTTGATTTAGATCACACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01318 | -242 | 4.9 | AAATTTGATCTGGATCACGCAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02199 | -237 | 4.7 | ATACTTGATCTAAATCACGTAA |
| Enterobacter sp. 638 | Ent638_2304 | -253 | 4.1 | TAAATTGATTCAGATCATGTTT |
| Erwinia amylovora ATCC 49946 | EAM_1900 | -223 | 3.9 | ATTGATGATCTGCATCATCTTT |
| Yersinia pestis KIM | y2023 | -286 | 5.3 | TTTTGTGATTTAAATCACGAAA |
| Serratia proteamaculans 568 | Spro_2704 | -278 | 5.1 | TTTTATGATTTAAATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2326 | -315 | 4.5 | AAGTTCGATGTTGATCACAAAA |
| Edwardsiella tarda EIB202 | ETAE_1508 | -265 | 5 | TTTCGTGACCTTAATCACAAAA |
| Proteus mirabilis HI4320 | PMI1486 | -246 | 5.4 | TATTGTGATGTAGATCACTTTA |
| -187 | 3.7 | AAAGGAGATCTTTTTAAAATAT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2496 | -237 | 3.7 | TATTTTTATTAGATTAAAAATT |
| -138 | 4.6 | TTATGTGATTAAGATCAATATA | ||
|
Position: -203
Score: 4.3 Sequence: AAATGTGATGTCAGACAGAAAT
Locus tag: Spro_2705
|
||||
| Spro_2705 | -203 | 4.3 | AAATGTGATGTCAGACAGAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tdk | ||||
| Ortholog function: Thymidine kinase (EC 2.7.1.21) | ||||
| Yersinia pestis KIM | y2145 | -208 | 4.9 | TATTGTGAGATTGCTCATATAA |
| Serratia proteamaculans 568 | Spro_2705 | -203 | 4.3 | AAATGTGATGTCAGACAGAAAT |
| Edwardsiella tarda EIB202 | ETAE_1506 | -206 | 4 | AACTGTTAGGTCGATCACTTAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2497 | -157 | 4.1 | TGGTGTGATGGTGGTCATGAAT |
|
Position: -143
Score: 5.7 Sequence: ATATGTGATCGGTATCACATAT
Locus tag: Spro_2727
|
||||
| Spro_2727 | -143 | 5.7 | ATATGTGATCGGTATCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: msrB | ||||
| Ortholog function: methionine sulfoxide reductase B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1778 | -137 | 5.2 | AAATGTGATTTTCATCACGATT |
| Salmonella typhimurium LT2 | STM1291 | -107 | 4.7 | TAATGTGACATCAGTCACGATT |
| Citrobacter koseri ATCC BAA-895 | CKO_01799 | -107 | 4.9 | AAACGTGATTCCGATCACGATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01198 | -135 | 5.1 | AAACGTGATTTAAGTCACAATT |
| Enterobacter sp. 638 | Ent638_1676 | -137 | 5.2 | ATATGTGAGAAAGATCACAATT |
| Erwinia amylovora ATCC 49946 | EAM_1930 | -137 | 5.2 | AATGGTGATCTGCATCACAATT |
| Yersinia pestis KIM | y2164 | -85 | 5.1 | ATTTGCGATTTTTATCACATTT |
| Serratia proteamaculans 568 | Spro_2727 | -143 | 5.7 | ATATGTGATCGGTATCACATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2343 | -135 | 5.6 | TTATGTGATACACATCACAATT |
| Edwardsiella tarda EIB202 | ETAE_1484 | -91 | 4.9 | GTTTGTGATGCTCATCACAAAA |
| Proteus mirabilis HI4320 | PMI1503 | -137 | 5.3 | TTATGTGAAATGTATCACATTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2557 | -267 | 4.6 | ATATGCGAGTCACATCACAATA |
|
Position: -227
Score: 5.6 Sequence: ATATGTGATACCGATCACATAT
Locus tag: Spro_2728
|
||||
| Spro_2728 | -227 | 5.6 | ATATGTGATACCGATCACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gapA | ||||
| Ortholog function: glyceraldehyde-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1779 | -226 | 5.3 | AATCGTGATGAAAATCACATTT |
| Salmonella typhimurium LT2 | STM1290 | -226 | 4.8 | AATCGTGACTGATGTCACATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_01800 | -226 | 5 | AATCGTGATCGGAATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01197 | -225 | 5.2 | AATTGTGACTTAAATCACGTTT |
| Enterobacter sp. 638 | Ent638_1675 | -225 | 5.7 | AATTGTGATCTTTCTCACATAT |
| Erwinia amylovora ATCC 49946 | EAM_1931 | -215 | 5.4 | AATTGTGATGCAGATCACCATT |
| Yersinia pestis KIM | y2165 | -218 | 5.1 | AAATGTGATAAAAATCGCAAAT |
| Serratia proteamaculans 568 | Spro_2728 | -227 | 5.6 | ATATGTGATACCGATCACATAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2344 | -235 | 5.8 | AATTGTGATGTGTATCACATAA |
| Edwardsiella tarda EIB202 | ETAE_1483 | -227 | 5.1 | TTTTGTGATGAGCATCACAAAC |
| Proteus mirabilis HI4320 | PMI1504 | -226 | 5.6 | AAATGTGATACATTTCACATAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2558 | -224 | 5.4 | TATTGTGATGTGACTCGCATAT |
|
Position: -113
Score: 4.6 Sequence: AATTGTGAATGTTGTCACGTTT
Locus tag: Spro_2746
|
||||
| Spro_2746 | -113 | 4.6 | AATTGTGAATGTTGTCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dadA | ||||
| Ortholog function: D-amino acid dehydrogenase small subunit | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1189 | -116 | 4.7 | AGATGTGAGCCAGCTCACCATA |
| Salmonella typhimurium LT2 | STM1803 | -107 | 4.6 | ATATGTGAAGCACGTCACCATA |
| Citrobacter koseri ATCC BAA-895 | CKO_01193 | -107 | 4.5 | AGATGTGAGGTGCGTCACCATA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02309 | -106 | 4.1 | TGCTGTGAGTTAAGTCACCATA |
| Enterobacter sp. 638 | Ent638_2363 | -107 | 4.3 | AGGTGTGAGGTAAGTCACCATA |
| Serratia proteamaculans 568 | Spro_2746 | -113 | 4.6 | AATTGTGAATGTTGTCACGTTT |
| Proteus mirabilis HI4320 | PMI1509 | -121 | 4.7 | AAATGTGATTTGACTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2561 | -114 | 5.4 | AATTGTGATCTAAATCATAAAT |
|
Position: -99
Score: 3.9 Sequence: ATTAGTGACGTACATCGCAACC
Locus tag: Spro_2760
|
||||
| Spro_2760 | -99 | 3.9 | ATTAGTGACGTACATCGCAACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadD | ||||
| Ortholog function: long-chain-fatty-acid--CoA ligase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1805 | -131 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Salmonella typhimurium LT2 | STM1818 | -131 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02322 | -97 | 3.7 | AATAGTGACGCGCTTCGCAACC |
| Erwinia amylovora ATCC 49946 | EAM_1956 | -130 | 3.9 | TTTAGTGATGCGCTTCGCAACC |
| Yersinia pestis KIM | y2236 | -80 | 4.1 | AATAGTGATGTATATCTCAACC |
| Serratia proteamaculans 568 | Spro_2760 | -99 | 3.9 | ATTAGTGACGTACATCGCAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2372 | -132 | 3.8 | ATTAGTGATCGTTCTCGCAACC |
| -75 | 3.7 | TAAAATAATGTTAATAACAATA | ||
| Proteus mirabilis HI4320 | PMI1166 | -121 | 4.4 | TTTAGTGATACACTTCGCATCT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2134 | -288 | 3.8 | AAATGCTATCTTAAGCAAAAAA |
| -137 | 4 | ATTAGTGATGTGTATCTCAACC | ||
|
Position: -211
Score: 3.9 Sequence: AAATGTGACGCAGGGTAAACTT
Locus tag: Spro_2930
|
||||
| Spro_2930 | -211 | 3.9 | AAATGTGACGCAGGGTAAACTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: putP | ||||
| Ortholog function: Proline/sodium symporter PutP (TC 2.A.21.2.1) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1015 | -207 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Salmonella typhimurium LT2 | STM1125 | -204 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Citrobacter koseri ATCC BAA-895 | CKO_02041 | -80 | 3.6 | AAATGTGAGAGAGTGCAACCTG |
| Enterobacter sp. 638 | Ent638_1542 | -249 | 3.7 | TTTTATGCGGCACTTAACACTT |
| Serratia proteamaculans 568 | Spro_2930 | -211 | 3.9 | AAATGTGACGCAGGGTAAACTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4218 | -130 | 3.7 | TTGTGCAACCTTGTTAACAAAT |
| Proteus mirabilis HI4320 | PMI1615 | -220 | 3.8 | TAGTGTGAAGTTACATACAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1958 | -243 | 4.4 | AAATGTGATTCAGTAAACGTTT |
|
Position: -277
Score: 3.8 Sequence: AAATGTGAATCACGTTAACTAA
Position: -206
Score: 4 Sequence: TTTTGCGATGTTACTCACAGGT
Locus tag: Spro_3071
|
||||
| Spro_3071 | -277 | 3.8 | AAATGTGAATCACGTTAACTAA | |
| -206 | 4 | TTTTGCGATGTTACTCACAGGT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaN | ||||
| Ortholog function: Phenylacetic acid degradation protein PaaN, ring-opening aldehyde dehydrogenase (EC 1.2.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1387 | -261 | 3.6 | TTTCGTGAATTAATTAAAAACA |
| -175 | 3.7 | AACTGTGACGGATTTCGCACCC | ||
| -109 | 3.8 | AGTTGCTATACAGATCGCATAG | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01468 | -246 | 3.3 | TTATGTGAATCACTTTGTTTAT |
| -177 | 4.4 | TTTTGTGATAATCTCCGCAAAA | ||
| Serratia proteamaculans 568 | Spro_3071 | -277 | 3.8 | AAATGTGAATCACGTTAACTAA |
| -206 | 4 | TTTTGCGATGTTACTCACAGGT | ||
|
Position: -134
Score: 3.8 Sequence: ACCTGTGAGTAACATCGCAAAA
Position: -63
Score: 3.8 Sequence: TTAGTTAACGTGATTCACATTT
Locus tag: Spro_3072
|
||||
| Spro_3072 | -134 | 3.8 | ACCTGTGAGTAACATCGCAAAA | |
| -63 | 3.8 | TTAGTTAACGTGATTCACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaA | ||||
| Ortholog function: predicted multicomponent oxygenase/reductase subunit for phenylacetic acid degradation | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1388 | -97 | 4.3 | ATTTGTGATTTTACTTAACTAT |
| -76 | 3.6 | TTGTGTAACTTTCATAAAACAA | ||
| -45 | 3.6 | TGTTTTTAATTAATTCACGAAA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01469 | -197 | 3.8 | CATTGTGATCGCGATGGCGTTA |
| -131 | 3.7 | TTTTGCGGAGATTATCACAAAA | ||
| Serratia proteamaculans 568 | Spro_3072 | -134 | 3.8 | ACCTGTGAGTAACATCGCAAAA |
| -63 | 3.8 | TTAGTTAACGTGATTCACATTT | ||
|
Position: -11
Score: 5 Sequence: AAATGTGACGCATGTCGCATTT
Locus tag: Spro_3194
|
||||
| Spro_3194 | -11 | 5 | AAATGTGACGCATGTCGCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sotB | ||||
| Ortholog function: Probable sugar efflux transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1528 | -94 | 4.9 | AAACGCGATCCAGATCACAAAT |
| Salmonella typhimurium LT2 | STM1522 | -94 | 4.5 | AAATGAGAAGCAGGTCACAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_01548 | -94 | 4.8 | TAATGAGACATACATCACAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01628 | -94 | 4.8 | AAATGAGACGCAGATCACAAAA |
| Enterobacter sp. 638 | Ent638_2000 | -95 | 4.9 | TTTTGAGATCTGCGTCACATAA |
|
Position: -177
Score: 4 Sequence: AAGTGTGCGTGAGGTCAAAAAT
Locus tag: Spro_3230
|
||||
| Spro_3230 | -177 | 4 | AAGTGTGCGTGAGGTCAAAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fruB | ||||
| Ortholog function: PTS system, fructose-specific IIA/FPr component | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2169 | -178 | 4.3 | AATTGTGCAGCACATCAAACTT |
| Salmonella typhimurium LT2 | STM2206 | -177 | 4.6 | AAATGTGCTTCACCTCAAAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00613 | -50 | 4.1 | AAGTGTGCTTTATCTCTAAATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02600 | -177 | 3.5 | AAGTGTGCAGTACCTCTAAGTT |
| Enterobacter sp. 638 | Ent638_2763 | -178 | 4.3 | AAATGTGCTGCACTTCTAAATT |
| Erwinia amylovora ATCC 49946 | EAM_2223 | -179 | 4.4 | AAATGTGCTGGCTGTCAAAAAT |
| Yersinia pestis KIM | y2887 | -178 | 4.1 | AAATGTGCGGAATGTCAAAAAT |
| Serratia proteamaculans 568 | Spro_3230 | -177 | 4 | AAGTGTGCGTGAGGTCAAAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2729 | -180 | 4.1 | AAATGTGCGTGATGTCAAAATT |
| Edwardsiella tarda EIB202 | ETAE_2303 | -199 | 4.1 | AAATGTGCTGAAGGTCTAAAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1992 | -180 | 4.7 | AAATGTGAGTAATCTCAAAAAA |
|
Position: -167
Score: 3.9 Sequence: AACCGTGAAGTGGATCAACCAA
Position: -48
Score: 4.1 Sequence: AATCTTGATCACCACCACAATA
Locus tag: Spro_3238
|
||||
| Spro_3238 | -167 | 3.9 | AACCGTGAAGTGGATCAACCAA | |
| -48 | 4.1 | AATCTTGATCACCACCACAATA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxuA | ||||
| Ortholog function: Mannonate dehydratase (EC 4.2.1.8) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4322 | -271 | 3.8 | TGTTGCGATGAATGTCACATCC |
| -186 | 4.5 | TCTTGTGATGTGGTTAACCAAT | ||
| Salmonella typhimurium LT2 | STM3135 | -205 | 4.3 | AAAATTGACACAGATCAAATAA |
| -155 | 4.6 | ATTTGTGATTTGGTTAGCCAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00609 | -115 | 3.9 | GATTGTGAGCTGGATCAATCAA |
| Enterobacter sp. 638 | Ent638_2767 | -116 | 3.9 | TTCTGTGAGTTGGATCAATCAA |
| Serratia proteamaculans 568 | Spro_3238 | -167 | 3.9 | AACCGTGAAGTGGATCAACCAA |
| -48 | 4.1 | AATCTTGATCACCACCACAATA | ||
| Edwardsiella tarda EIB202 | ETAE_2289 | -188 | 4.2 | AATCGTGAGGCGGATCAACCAA |
|
Position: -214
Score: 4.2 Sequence: AAATGCGAGCTGAGTCGCAAAA
Position: -121
Score: 4.1 Sequence: GCTTGTGATGTTTTTTACATTT
Locus tag: Spro_3250
|
||||
| Spro_3250 | -214 | 4.2 | AAATGCGAGCTGAGTCGCAAAA | |
| -121 | 4.1 | GCTTGTGATGTTTTTTACATTT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yejG | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2181 | -158 | 3.7 | AAACGTGACCACGCCCGCAGAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02614 | -204 | 3.8 | AAAGTTGTTTTGGATCACAGAA |
| Erwinia amylovora ATCC 49946 | EAM_2233 | -177 | 3.6 | AAATGAGCATTACTTCTCAAAA |
| Yersinia pestis KIM | y2914 | -238 | 4.4 | AAATGGGATCTGAATCCCAAAT |
| Serratia proteamaculans 568 | Spro_3250 | -214 | 4.2 | AAATGCGAGCTGAGTCGCAAAA |
| -121 | 4.1 | GCTTGTGATGTTTTTTACATTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2740 | -178 | 4 | ATTCGTGATCAGTTTGGCATTA |
| -101 | 3.8 | TGTTGTTTTTTTGTTCACGAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2865 | -185 | 4.1 | AAATGAGAGATTGATCTCACTT |
| -183 | 3.6 | ATGAGAGATTGATCTCACTTTT | ||
| -141 | 3.8 | TAATGTAATACTATAAACACAA | ||
|
Position: -86
Score: 5 Sequence: TTAAGTGATCTTTATCACGTTT
Locus tag: Spro_3288
|
||||
| Spro_3288 | -86 | 5 | TTAAGTGATCTTTATCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnO | ||||
| Ortholog function: 5-keto-D-gluconate-5-reductase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4266 | -81 | 5.1 | TGACGTGATCTTCATCACAAAT |
| Salmonella typhimurium LT2 | STM4483 | -81 | 4.3 | CAGCGTGACATAAGTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02793 | -140 | 5.4 | TAATGTGACATGTTTCACAAAT |
|
Position: -206
Score: 4.7 Sequence: AAACGTGATAAAGATCACTTAA
Locus tag: Spro_3289
|
||||
| Spro_3289 | -206 | 4.7 | AAACGTGATAAAGATCACTTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: idnR | ||||
| Ortholog function: DNA-binding transcriptional repressor, 5-gluconate-binding | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4264 | -81 | 5.1 | TGACGTGATCTTCATCACAAAT |
| Salmonella typhimurium LT2 | STM4481 | -81 | 4.3 | CAGCGTGACATAAGTCACAAAT |
| Citrobacter koseri ATCC BAA-895 | CKO_02791 | -140 | 5.4 | TAATGTGACATGTTTCACAAAT |
|
Position: -125
Score: 4.2 Sequence: TTTTGTGACAAATTCCACATCT
Position: -96
Score: 3.6 Sequence: TATCTTGTTTCTCATTACATAT
Position: -73
Score: 4.6 Sequence: TTATGTGAAATACATCACATGA
Locus tag: Spro_3290
|
||||
| Spro_3290 | -125 | 4.2 | TTTTGTGACAAATTCCACATCT | |
| -96 | 3.6 | TATCTTGTTTCTCATTACATAT | ||
| -73 | 4.6 | TTATGTGAAATACATCACATGA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycdZ | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1036 | -52 | 4 | AAATGTGTGCTCGATCTCATTC |
| -50 | 3.7 | ATGTGTGCTCGATCTCATTCAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02033 | -40 | 3.9 | AAATGTGTGCGTGATCTCATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01059 | -52 | 4.1 | TACTGTGTTTTAGATCGCATTC |
| Serratia proteamaculans 568 | Spro_3290 | -125 | 4.2 | TTTTGTGACAAATTCCACATCT |
| -96 | 3.6 | TATCTTGTTTCTCATTACATAT | ||
| -73 | 4.6 | TTATGTGAAATACATCACATGA | ||
| Edwardsiella tarda EIB202 | ETAE_2360 | -124 | 4.3 | AAGTGTGATTGATGTCACTTTG |
| -72 | 3.6 | CGGTGTGATGTCCATCAATGAA | ||
| Proteus mirabilis HI4320 | PMI3124 | -240 | 3.7 | ATTAATAATATATATCAAACAA |
|
Position: -125
Score: 3.8 Sequence: TCACATGATGTTAATCATAAAT
Locus tag: Spro_3316
|
||||
| Spro_3316 | -125 | 3.8 | TCACATGATGTTAATCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ackA | ||||
| Ortholog function: acetate kinase | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02687 | -95 | 3.8 | AGGCATGATGTTAATCATAAAT |
| Enterobacter sp. 638 | Ent638_2840 | -96 | 3.8 | TGGCATGATGTTAATCATAAAT |
| Serratia proteamaculans 568 | Spro_3316 | -125 | 3.8 | TCACATGATGTTAATCATAAAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3039 | -95 | 4.2 | AGGTATGATGTTAATCATAAAT |
| Proteus mirabilis HI4320 | PMI1771 | -123 | 3.6 | AAGCATGATGCGTATCATTAAT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3095 | -121 | 3.6 | TAGCATGATGTTAATCATTTAA |
|
Position: -271
Score: 5.1 Sequence: TTAAGTGATGGAAATCACAAAT
Locus tag: Spro_3381
|
||||
| Spro_3381 | -271 | 5.1 | TTAAGTGATGGAAATCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadL | ||||
| Ortholog function: Long-chain fatty acid transport protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2344 | -269 | 4.8 | ATAAGTGACCGAAATCACACTT |
| -247 | 3.9 | AAAAATGATCTAAAACAAAATT | ||
| Salmonella typhimurium LT2 | STM2391 | -262 | 4.8 | TTAAGTGACCGAAATCACACTT |
| -240 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00446 | -263 | 4.8 | ATAAGTGACCGAAATCACACTT |
| -241 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02726 | -264 | 4.7 | TTAAGTGACAGAAATCACACTT |
| -242 | 3.9 | AAAAATGATCTAAAACAAAAAT | ||
| Enterobacter sp. 638 | Ent638_2884 | -269 | 4.2 | GTAAGTGACCGATATCACACTA |
| -247 | 4 | AAAAATGATCTAGCGCAAAAAT | ||
| -214 | 3.7 | ATGAGTGCGACGGCTCGCATTT | ||
| Erwinia amylovora ATCC 49946 | EAM_2348 | -194 | 3.9 | TTTTGTTAAGCAGATCTCTTTT |
| Serratia proteamaculans 568 | Spro_3381 | -271 | 5.1 | TTAAGTGATGGAAATCACAAAT |
| -196 | 3.8 | TTTTGTTAGCCAGATCTCTCTT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3081 | -332 | 3.8 | AATTTTTATCTTCCTTATATTT |
| -262 | 4.9 | TTTAGTGATATCAGTCACATTA | ||
| Proteus mirabilis HI4320 | PMI1810 | -326 | 3.7 | AAGTGTTAATTATCTATCATAA |
| -186 | 4.2 | TAATGTTAACTAAATCCCAAAT | ||
|
Position: -136
Score: 4.1 Sequence: TTCTGTGCTGCCCGTCACGTTT
Locus tag: Spro_3399
|
||||
| Spro_3399 | -136 | 4.1 | TTCTGTGCTGCCCGTCACGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mltB | ||||
| Ortholog function: membrane-bound lytic murein transglycosylase B | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2701 | -184 | 4.6 | AAGTGTTATTTTGATCGCAAAA |
| Salmonella typhimurium LT2 | STM2831 | -182 | 4.4 | AAGTGTTATTGTGATCGCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04055 | -184 | 4.5 | AAGTGTTATTTTGATCTCAAAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03036 | -296 | 4.3 | AAGTGTTAAATGGATCGCAAAA |
| Serratia proteamaculans 568 | Spro_3399 | -136 | 4.1 | TTCTGTGCTGCCCGTCACGTTT |
|
Position: -116
Score: 4.8 Sequence: TTTTGTGATCCGGATCGCTAAT
Locus tag: Spro_3407
|
||||
| Spro_3407 | -116 | 4.8 | TTTTGTGATCCGGATCGCTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glk | ||||
| Ortholog function: glucokinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2388 | -116 | 4.1 | TTGTGTGACCCAGATCGATATT |
| Salmonella typhimurium LT2 | STM2403 | -116 | 3.9 | TTCTGTGATGAAGATCTATATT |
| Citrobacter koseri ATCC BAA-895 | CKO_00412 | -116 | 4.5 | TTATGTGATGCAGATCGATATT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02738 | -117 | 4.4 | AAATGTGACCTGTGTCGCTAAA |
| Enterobacter sp. 638 | Ent638_2921 | -116 | 3.8 | TTCTGTGACGAAGATCGATTAT |
| Yersinia pestis KIM | y1505 | -113 | 4.7 | TTATGAGATGTCAGTCACAAAA |
| Serratia proteamaculans 568 | Spro_3407 | -116 | 4.8 | TTTTGTGATCCGGATCGCTAAT |
|
Position: -249
Score: 4.7 Sequence: ATTAGCGATCCGGATCACAAAA
Locus tag: Spro_3408
|
||||
| Spro_3408 | -249 | 4.7 | ATTAGCGATCCGGATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfeO | ||||
| Ortholog function: Chloride channel protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2389 | -109 | 4.1 | AATATCGATCTGGGTCACACAA |
| Salmonella typhimurium LT2 | STM2404 | -109 | 3.9 | AATATAGATCTTCATCACAGAA |
| Citrobacter koseri ATCC BAA-895 | CKO_00411 | -134 | 4.4 | AATATCGATCTGCATCACATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02739 | -192 | 4.3 | TTTAGCGACACAGGTCACATTT |
| Enterobacter sp. 638 | Ent638_2922 | -111 | 3.7 | ATAATCGATCTTCGTCACAGAA |
| Serratia proteamaculans 568 | Spro_3408 | -249 | 4.7 | ATTAGCGATCCGGATCACAAAA |
|
Position: -84
Score: 3.6 Sequence: ATTTGCAATAGACCTCTCGTTT
Locus tag: Spro_3416
|
||||
| Spro_3416 | -84 | 3.6 | ATTTGCAATAGACCTCTCGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: Nucleoside permease NupC | ||||
| Yersinia pestis KIM | y1499 | -136 | 4.4 | TTATGTGATCAAGCCCACTAAT |
| -84 | 3.9 | ATTTGTGGTTCACATCTCTTTT | ||
| Serratia proteamaculans 568 | Spro_3416 | -84 | 3.6 | ATTTGCAATAGACCTCTCGTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3183 | -84 | 3.7 | TTTTGCGTCCTTCCTCTCATTT |
| -31 | 3.9 | AAATTTGGCCTGCCTCATATTT | ||
|
Position: -33
Score: 3.6 Sequence: TTGATTTATTTAATTCATATAT
Locus tag: Spro_3441
|
||||
| Spro_3441 | -33 | 3.6 | TTGATTTATTTAATTCATATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yfeR | ||||
| Ortholog function: transcriptional regulator, LysR family | ||||
| Salmonella typhimurium LT2 | STM2424 | -37 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_00385 | -37 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02755 | -112 | 3.6 | AAAATTGATTTATTGCATCTAT |
| Erwinia amylovora ATCC 49946 | EAM_2384 | -33 | 3.7 | TTAATTTATTGAATTCATATAT |
| Serratia proteamaculans 568 | Spro_3441 | -33 | 3.6 | TTGATTTATTTAATTCATATAT |
|
Position: -349
Score: 4.1 Sequence: TTTTGTGGACTGGATCAAAGTT
Position: -149
Score: 3.6 Sequence: TTTTTTGATCTGAAGTGCCAAA
Locus tag: Spro_3448
|
||||
| Spro_3448 | -349 | 4.1 | TTTTGTGGACTGGATCAAAGTT | |
| -149 | 3.6 | TTTTTTGATCTGAAGTGCCAAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ptsH | ||||
| Ortholog function: PTS system phosphocarrier protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2415 | -209 | 3.9 | TTTTATGATTTGGTTCAATTCT |
| Salmonella typhimurium LT2 | STM2431 | -209 | 4.4 | TTTTATGATTTGGTTCAAATCT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02762 | -206 | 4 | TTTTATGATTTGGTTCAAGTCT |
| Enterobacter sp. 638 | Ent638_2943 | -271 | 4.4 | TTTTGTGGTCCACTTCAAACTT |
| -144 | 4 | TTTTATGATTTGGTTCAAGTCT | ||
| Serratia proteamaculans 568 | Spro_3448 | -149 | 3.6 | TTTTTTGATCTGAAGTGCCAAA |
| Proteus mirabilis HI4320 | PMI1828 | -275 | 4.4 | TTTTGTGGTAGAGATCAAACTT |
| -115 | 3.6 | TAACGTAACATGGCTTATATTA | ||
|
Position: -209
Score: 3.6 Sequence: CTTTGTTATCAAACTCACTATC
Position: -90
Score: 4.1 Sequence: GTTTGTGACGTTTCTCTCACTA
Locus tag: Spro_3472
|
||||
| Spro_3472 | -209 | 3.6 | CTTTGTTATCAAACTCACTATC | |
| -90 | 4.1 | GTTTGTGACGTTTCTCTCACTA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: maeB | ||||
| Ortholog function: malic enzyme | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2463 | -257 | 3.9 | ATGAGTGCGTTAATTCACACTT |
| Salmonella typhimurium LT2 | STM2472 | -240 | 3.8 | ATGAGTGTGTTGATTCACACTT |
| Enterobacter sp. 638 | Ent638_2958 | -231 | 4.1 | ATACATGACGTACTTAACAAAA |
| Yersinia pestis KIM | y1449 | -92 | 3.7 | GATTGTGATAAATCACTCACTA |
| Serratia proteamaculans 568 | Spro_3472 | -209 | 3.6 | CTTTGTTATCAAACTCACTATC |
| -90 | 4.1 | GTTTGTGACGTTTCTCTCACTA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2719 | -74 | 4 | TGTTATGATTTGACACACAGTA |
|
Position: -110
Score: 4.9 Sequence: AATTGTGATCTATTTAAAACAA
Locus tag: Spro_3569
|
||||
| Spro_3569 | -110 | 4.9 | AATTGTGATCTATTTAAAACAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: srlA | ||||
| Ortholog function: PTS system, glucitol/sorbitol-specific IIC component (EC 2.7.1.69) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2702 | -93 | 4.4 | TTTTGCGATCAAAATAACACTT |
| Salmonella typhimurium LT2 | STM2832 | -93 | 4.3 | TTTTGCGATCACAATAACACTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04056 | -93 | 4.3 | TTTTGAGATCAAAATAACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03037 | -92 | 4.6 | TTTTGCGATCCATTTAACACTT |
| Serratia proteamaculans 568 | Spro_3569 | -110 | 4.9 | AATTGTGATCTATTTAAAACAA |
|
Position: -21
Score: 4.6 Sequence: AAATTTGAAGGAGATCACAGAA
Locus tag: Spro_3600
|
||||
| Spro_3600 | -21 | 4.6 | AAATTTGAAGGAGATCACAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: CKO_02295 | ||||
| Ortholog function: hypothetical protein | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -218 | 3.9 | TTTTGTTATCTCATTGAAAATT |
| -104 | 4.1 | TTTTGTGCAAGTTTTCTCATTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_02295 | -218 | 3.9 | TTTTGTTATCTCATTGAAAATT |
| -104 | 4.1 | TTTTGTGCAAGTTTTCTCATTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -103 | 3.9 | TGAAATGAGCGAGATCGCATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00854 | -103 | 3.9 | TGAAATGAGCGAGATCGCATAT |
| Enterobacter sp. 638 | Ent638_1314 | -122 | 4.1 | TTTTGTGCAAGCTTTCTCATAA |
| Enterobacter sp. 638 | Ent638_1314 | -122 | 4.1 | TTTTGTGCAAGCTTTCTCATAA |
| Yersinia pestis KIM | y3231 | -299 | 5.4 | TAATGTGACTTTGTTCACATTA |
| -122 | 3.8 | TTCTTTGAAAGAATTCTCATAA | ||
| -21 | 4.9 | TAATTTGAGGGAGATCACAAAA | ||
| Yersinia pestis KIM | y3231 | -299 | 5.4 | TAATGTGACTTTGTTCACATTA |
| -122 | 3.8 | TTCTTTGAAAGAATTCTCATAA | ||
| -21 | 4.9 | TAATTTGAGGGAGATCACAAAA | ||
| Serratia proteamaculans 568 | Spro_3600 | -130 | 3.7 | AAACGTGGTTTTTTGCAAAAAT |
| -21 | 4.6 | AAATTTGAAGGAGATCACAGAA | ||
| Serratia proteamaculans 568 | Spro_3600 | -130 | 3.7 | AAACGTGGTTTTTTGCAAAAAT |
| -21 | 4.6 | AAATTTGAAGGAGATCACAGAA | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -21 | 4.8 | AAAAGTGAACGGGATCACAAAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1966 | -21 | 4.8 | AAAAGTGAACGGGATCACAAAA |
|
Position: -84
Score: 3.8 Sequence: TTATGTGATGTGAGTCTATATG
Locus tag: Spro_3637
|
||||
| Spro_3637 | -84 | 3.8 | TTATGTGATGTGAGTCTATATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nupC | ||||
| Ortholog function: Nucleoside permease NupC | ||||
| Proteus mirabilis HI4320 | PMI1822 | -132 | 3.9 | AAGTGTGATCAACCTATCTTAT |
| -80 | 4.4 | TATTGTGACAATAATCACATCG | ||
| -58 | 3.8 | TAATGTTACGCGTTACATAAAA | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu1399 | -213 | 3.8 | TAATGTGATATCTATACTCTAT |
|
Position: -140
Score: 3.8 Sequence: AAAATTGACTTTAATCAAAGAA
Locus tag: Spro_3682
|
||||
| Spro_3682 | -140 | 3.8 | AAAATTGACTTTAATCAAAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: grcA | ||||
| Ortholog function: Autonomous glycyl radical cofactor | ||||
| Serratia proteamaculans 568 | Spro_3682 | -140 | 3.8 | AAAATTGACTTTAATCAAAGAA |
|
Position: -272
Score: 4.6 Sequence: TGCTGTGATTTTGTTCAAAATA
Locus tag: Spro_3731
|
||||
| Spro_3731 | -272 | 4.6 | TGCTGTGATTTTGTTCAAAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: citA | ||||
| Ortholog function: signal transduction histidine kinase regulating citrate/malate metabolism | ||||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00054 | -269 | 4.3 | TAATGTGAAGCTTCCCAAATTA |
| Enterobacter sp. 638 | Ent638_3378 | -292 | 4.1 | TTATGTGAGGAACGGCATATTA |
| Serratia proteamaculans 568 | Spro_3731 | -272 | 4.6 | TGCTGTGATTTTGTTCAAAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2577 | -104 | 3.9 | AAACGTGTTATTGCTCACAAGT |
|
Position: -77
Score: 3.6 Sequence: GTTTGTGATCGCTATCCCTCAA
Locus tag: Spro_3863
|
||||
| Spro_3863 | -77 | 3.6 | GTTTGTGATCGCTATCCCTCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: dcuB | ||||
| Ortholog function: C4-dicarboxylate transporter DcuB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4123 | -53 | 3.5 | GACTGTGATCTATTCAGCAAAA |
| Salmonella typhimurium LT2 | STM4301 | -53 | 3.5 | GGCTGTGATCCATTTATCAAAA |
| Citrobacter koseri ATCC BAA-895 | CKO_03748 | -52 | 3.9 | GACTGTGATCTATTTATCAAAA |
| Enterobacter sp. 638 | Ent638_2479 | -81 | 3.3 | AAATCTGATCTGGCTCCCAGCC |
| Serratia proteamaculans 568 | Spro_3863 | -77 | 3.6 | GTTTGTGATCGCTATCCCTCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA1533 | -296 | 3.5 | TATTGCGAGCGAGATCTTTTAT |
| -247 | 3.5 | TTAATAGATTTAGATCAAGAAA | ||
| Edwardsiella tarda EIB202 | ETAE_2844 | -194 | 3.6 | ATACTTTATTCAGATCAATTTT |
| Proteus mirabilis HI4320 | PMI0389 | -138 | 3.3 | AACTATAACAACGATCAAAAAA |
|
Position: -215
Score: 4.4 Sequence: TTTGGTGACATATGTCACATTG
Locus tag: Spro_3923
|
||||
| Spro_3923 | -215 | 4.4 | TTTGGTGACATATGTCACATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: serA | ||||
| Ortholog function: D-3-phosphoglycerate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2913 | -210 | 4.1 | TTTGGTGACATGTGTCACGCTT |
| Salmonella typhimurium LT2 | STM3062 | -217 | 4.5 | TTTGGTGACATGTATCACGTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03348 | -214 | 4.6 | TTTGGTGACTTCTGTCACATTT |
| Enterobacter sp. 638 | Ent638_3332 | -215 | 4.1 | TTCGGTGACTTGTATCACGTTT |
| Yersinia pestis KIM | y3301 | -126 | 4.8 | TTTGGTGATATATATCACATTC |
| Serratia proteamaculans 568 | Spro_3923 | -215 | 4.4 | TTTGGTGACATATGTCACATTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3905 | -214 | 3.9 | TTTGGTACTTAATATCACATTT |
| Proteus mirabilis HI4320 | PMI2031 | -210 | 4 | TTCAGTGATATATATCACACGA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3605 | -207 | 4.4 | TTTAGTGATATATTTCATATCT |
| -178 | 4.2 | TTATTTGATCTAAATCCTAATT | ||
| -105 | 4.4 | TTATGTGATGGGAATAGCAATC | ||
|
Position: -182
Score: 4.8 Sequence: AAACGTGTTGTCGATCACAAAT
Locus tag: Spro_3933
|
||||
| Spro_3933 | -182 | 4.8 | AAACGTGTTGTCGATCACAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yiaK | ||||
| Ortholog function: 3-dehydro-L-gulonate 2-dehydrogenase (EC 1.1.1.130) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3575 | -175 | 4.1 | AAGTGTGCCGTAGTTCACGATC |
| Salmonella typhimurium LT2 | STM3668 | -187 | 4.5 | AAGTGTGTTGCAGTTCACGATA |
| Citrobacter koseri ATCC BAA-895 | CKO_05033 | -177 | 4.1 | AAGTGTGTTTCAGTTCACGATC |
| Serratia proteamaculans 568 | Spro_3933 | -182 | 4.8 | AAACGTGTTGTCGATCACAAAT |
|
Position: -309
Score: 4.1 Sequence: AAGTGTGCGCTAGATCATCTTA
Locus tag: Spro_3946
|
||||
| Spro_3946 | -309 | 4.1 | AAGTGTGCGCTAGATCATCTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: epd | ||||
| Ortholog function: D-erythrose 4-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2927 | -213 | 4.7 | AAGTGTGATGTGAGTCAGATAA |
| Salmonella typhimurium LT2 | STM3070 | -213 | 5 | AAATGTGATGCAGGTCAGATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04297 | -213 | 4.8 | AAGTGTGATGCAGGTCAGATAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03356 | -213 | 4.8 | AAATGTGATGTGAGTCATATAG |
| Enterobacter sp. 638 | Ent638_3340 | -215 | 4.5 | AAATGTGACGCAAGTCATATAG |
| Erwinia amylovora ATCC 49946 | EAM_2813 | -208 | 4.1 | TTTTGTGACGCAGATCGAAAGT |
| Yersinia pestis KIM | y3309 | -216 | 3.7 | AATTGTGCCCTTTTTCAGGGAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3913 | -194 | 4.1 | TTTTATGACGCAGGTCACTCTT |
| Edwardsiella tarda EIB202 | ETAE_2958 | -233 | 4.9 | AATTGTGATGCAATGCACGTTT |
| Proteus mirabilis HI4320 | PMI0241 | -253 | 4.4 | AAATGTTAACAAGAGCACATTT |
|
Position: -192
Score: 3.9 Sequence: TTATGTGAACGAATTAACAACC
Locus tag: Spro_4008
|
||||
| Spro_4008 | -192 | 3.9 | TTATGTGAACGAATTAACAACC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: acnB | ||||
| Ortholog function: Aconitate hydratase 2 (EC 4.2.1.3) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0118 | -144 | 3.5 | TTTTGTAAACAGATTAACACCT |
| Salmonella typhimurium LT2 | STM0158 | -157 | 3.9 | TTTTGTAAACAGATTAACACTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00124 | -260 | 3.5 | TTTTGTAAACAGATTAACACCT |
| Yersinia pestis KIM | y0771 | -276 | 4.3 | TTATGTGAACGAATTAACACTG |
| Serratia proteamaculans 568 | Spro_4008 | -192 | 3.9 | TTATGTGAACGAATTAACAACC |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3778 | -163 | 4.3 | TTATGTGAACGAATTAACAATC |
| Proteus mirabilis HI4320 | PMI2040 | -177 | 4.5 | TTATGTGAACGAATTAACATAG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3619 | -261 | 3.6 | TTCTGTGAACGAATTAACATCG |
|
Position: -310
Score: 3.2 Sequence: TTTTGCGATGTAAATAGGTATT
Position: -132
Score: 3.1 Sequence: AAATGTGCGGGTAACCTGATTT
Position: -56
Score: 3.4 Sequence: TTTTGAAATTGGTATTACCAAT
Locus tag: Spro_4012
|
||||
| Spro_4012 | -310 | 3.2 | TTTTGCGATGTAAATAGGTATT | |
| -132 | 3.1 | AAATGTGCGGGTAACCTGATTT | ||
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pdhR | ||||
| Ortholog function: Transcriptional repressor for pyruvate dehydrogenase complex | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0113 | -156 | 3.7 | AAACGTTATATATGTCAAGTTG |
| -131 | 3.8 | AAATGTGCACAGTTTCATGATT | ||
| Salmonella typhimurium LT2 | STM0151 | -157 | 3.5 | AAACATGATTTCTGTAAAATTG |
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| -79 | 3 | CTTATTAAGCTTTCTCACGAAA | ||
| -54 | 3.4 | TAATGGGACAGGTTCCAGATAA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03260 | -180 | 3.2 | ATTTGTGCATAGTTACATCTTT |
| -157 | 3.1 | AAACGTTATTTCTGTAATCTTG | ||
| -148 | 3.3 | TTCTGTAATCTTGTTAAAATGT | ||
| -120 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_00117 | -155 | 3.2 | AAATGTTATTTCTGTAAGGTTG |
| -118 | 3.2 | TTTACTGATTTCAATCAAAACC | ||
| Enterobacter sp. 638 | Ent638_0659 | -120 | 3.2 | TTTACTGATTTCAATCAAAACC |
| -77 | 3.1 | TATTGTATTTTCTGGCGAAAAT | ||
| -68 | 3 | TTTAGCGATACGAATATGAAAT | ||
| Erwinia amylovora ATCC 49946 | EAM_0746 | -198 | 3.3 | TAAAGCGATCGGATTTAACAAT |
| Yersinia pestis KIM | y0766 | -151 | 4.2 | AAATGTGCTGGGTTTCATGATT |
| -139 | 3.3 | TTTCATGATTTCGGTCAAGGTC | ||
| -74 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Serratia proteamaculans 568 | Spro_4012 | -132 | 3.1 | AAATGTGCGGGTAACCTGATTT |
| -56 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3790 | -120 | 3.7 | ATTGGTGATTTAGCTCAAGGTC |
| -55 | 3.4 | TTTTGAAATTGGTATTACCAAT | ||
| Edwardsiella tarda EIB202 | ETAE_0658 | -143 | 3.2 | TTTCATGATTTACATCAATAGT |
| Proteus mirabilis HI4320 | PMI2047 | -218 | 3.1 | TGTTTTTAATCTTTTCTAATAA |
| -199 | 4.4 | TAATGCGATCTAGTTATCAAAT | ||
| -181 | 4.2 | AAATTTGATGAATTTATCAAAT | ||
| -158 | 3 | ATTTGTTAAAATTTGCAGGTTT | ||
| -138 | 3.9 | TTTTATGATTTCGCTCAACAAC | ||
| -95 | 3.1 | CTTTGTTACTTTATTATCCATT | ||
| -89 | 3.1 | TACTTTATTATCCATTACATTA | ||
|
Position: -139
Score: 4.1 Sequence: TTTTGCAAGCTGGCTCACAGTT
Locus tag: Spro_4014
|
||||
| Spro_4014 | -139 | 4.1 | TTTTGCAAGCTGGCTCACAGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: araT | ||||
| Ortholog function: putative permease of the Na+:galactoside symporter family | ||||
| Erwinia amylovora ATCC 49946 | EAM_0744 | -128 | 5.3 | AATTGTTATCTGCTTCACATTA |
| Serratia proteamaculans 568 | Spro_4014 | -139 | 4.1 | TTTTGCAAGCTGGCTCACAGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3792 | -129 | 4.4 | ATTTGCTATATCCATCACACTT |
|
Position: -126
Score: 4.2 Sequence: ATTCATGACATCTATCACATTC
Locus tag: Spro_4309
|
||||
| Spro_4309 | -126 | 4.2 | ATTCATGACATCTATCACATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fadH | ||||
| Ortholog function: 2,4-dienoyl-CoA reductase [NADPH] (2,4-dienoyl coenzyme A reductase) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3081 | -112 | 3.9 | CTTTTTGAATCCCATCACAAAC |
| Salmonella typhimurium LT2 | STM3219 | -113 | 4.3 | TTTTTTGAATCCCATCACAATC |
| Citrobacter koseri ATCC BAA-895 | CKO_04487 | -113 | 4.3 | TTTTTTGAATCCCATCACAATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03510 | -111 | 3.9 | TTCTTTGAATCCCATCACAATC |
| Enterobacter sp. 638 | Ent638_3539 | -111 | 3.9 | ATCTTTGAATCCCATCACATTC |
| Erwinia amylovora ATCC 49946 | EAM_0507 | -169 | 3.8 | AACCGTGACTGAGATCGCTAAA |
| Yersinia pestis KIM | y3589 | -131 | 4 | ATTCATGACGGCTATCACAATC |
| Serratia proteamaculans 568 | Spro_4309 | -126 | 4.2 | ATTCATGACATCTATCACATTC |
| Proteus mirabilis HI4320 | PMI3702 | -213 | 3.8 | TATTATTATATGATTAAAAAAT |
| -103 | 3.8 | TTCCATGATTAAGATCACAACT | ||
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3990 | -161 | 4.3 | TTTCATGACCTTCATCACATTC |
|
Position: -231
Score: 4.1 Sequence: AAAGTTGAGTGATATCACAAAA
Locus tag: Spro_4321
|
||||
| Spro_4321 | -231 | 4.1 | AAAGTTGAGTGATATCACAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uxaC | ||||
| Ortholog function: Uronate isomerase (EC 5.3.1.12) | ||||
| Yersinia pestis KIM | y3600 | -229 | 4.1 | AAAGTTGAGTGACATCACAAAA |
| -109 | 3.6 | TTTTGCGATCAATATCTATAAA | ||
| Serratia proteamaculans 568 | Spro_4321 | -231 | 4.1 | AAAGTTGAGTGATATCACAAAA |
|
Position: -180
Score: 4.8 Sequence: TTTTGTGATATCACTCAACTTT
Locus tag: Spro_4322
|
||||
| Spro_4322 | -180 | 4.8 | TTTTGTGATATCACTCAACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: exuT | ||||
| Ortholog function: Hexuronate transporter | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3093 | -274 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -152 | 5.1 | ATTTGTGATGGCTCTCACCTTT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04495 | -250 | 5.2 | ATTTGTGATGTCACTCACCTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03521 | -263 | 4.4 | TTTTGTGACAGCTCTCAACTTT |
| Enterobacter sp. 638 | Ent638_3547 | -261 | 4.2 | TTTCGTGAGTTAGATCAATAAA |
| -139 | 5.2 | TTTTGTGATGTCACTCACCTTT | ||
| Serratia proteamaculans 568 | Spro_4322 | -180 | 4.8 | TTTTGTGATATCACTCAACTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0644 | -208 | 4.8 | TTTTGTGATATCACTCAACTTT |
|
Position: -72
Score: 3.7 Sequence: ATGTGTGATGTAGATTAGTGTT
Locus tag: Spro_4341
|
||||
| Spro_4341 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: elbB | ||||
| Ortholog function: sigma cross-reacting protein 27A (SCRP-27A) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3209 | -91 | 3.7 | ATTTGTTACATGAATCAGTTAA |
| -69 | 4 | ATGTGTGATGCGTACCATTTTT | ||
| Salmonella typhimurium LT2 | STM3327 | -91 | 3.9 | ATTTGTTACATGAATCATTTAA |
| -69 | 3.6 | ATGTGTGAAGCGTAGCATTTTA | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04612 | -92 | 3.7 | TTTTGTTACATGAATCAGTTAA |
| -70 | 3.6 | ATGTGTGAAGCGCAGCATTTTA | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03618 | -93 | 3.6 | ATTTGTTACATGAATCAGTAAA |
| -71 | 3.8 | ATATGTGAAGCATAGCGAGTTA | ||
| Serratia proteamaculans 568 | Spro_4341 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0316 | -72 | 3.7 | ATGTGTGATGTAGATTAGTGTT |
| Proteus mirabilis HI4320 | PMI3679 | -174 | 4.1 | TTTTTTGATTATCATTACATAG |
|
Position: -170
Score: 3.7 Sequence: CTTCGTGATCGGGATCTCTTTC
Position: -67
Score: 3.8 Sequence: TTTTGTGCTGTTTTTCCGAATT
Locus tag: Spro_4382
|
||||
| Spro_4382 | -170 | 3.7 | CTTCGTGATCGGGATCTCTTTC | |
| -67 | 3.8 | TTTTGTGCTGTTTTTCCGAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rnk | ||||
| Ortholog function: Regulator of nucleoside diphosphate kinase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b0610 | -140 | 3.8 | GAATGTGACGCAAATCACTTCA |
| Salmonella typhimurium LT2 | STM0616 | -141 | 3.8 | GAATGTGAACTAAATCACTTCA |
| Citrobacter koseri ATCC BAA-895 | CKO_02549 | -141 | 3.9 | GAATGTGAGCTAAATCACTTCA |
| Enterobacter sp. 638 | Ent638_1148 | -187 | 4.1 | AAATCTGAGAACGATCACGTTT |
| -140 | 3.8 | GAATGTGACATTCATCACTTCA | ||
| Serratia proteamaculans 568 | Spro_4382 | -170 | 3.7 | CTTCGTGATCGGGATCTCTTTC |
| -67 | 3.8 | TTTTGTGCTGTTTTTCCGAATT | ||
| Edwardsiella tarda EIB202 | ETAE_0492 | -145 | 4.4 | ATTTGTGAGCCAGCTCTCTTTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4046 | -127 | 3.7 | GTTCGTGATCATGATCTCTTTA |
|
Position: -293
Score: 5.1 Sequence: AAAAGTGATTTAGATCACAGAT
Locus tag: Spro_4392
|
||||
| Spro_4392 | -293 | 5.1 | AAAAGTGATTTAGATCACAGAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhcR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3242 | -167 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Salmonella typhimurium LT2 | STM3366 | -166 | 5.4 | AAAAGTGATTTAGATCACATAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04650 | -168 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03651 | -116 | 5.2 | AAAAGTGATTTAGATCACACAT |
| -63 | 3.7 | TATTGTTAGCTACATAATAAAC | ||
| Enterobacter sp. 638 | Ent638_3679 | -165 | 5.4 | AAAAGTGATTTAGATCACATAT |
| Yersinia pestis KIM | y0179 | -269 | 5.2 | AAAAGTGATTTAGATCACACAT |
| Serratia proteamaculans 568 | Spro_4392 | -293 | 5.1 | AAAAGTGATTTAGATCACAGAT |
| -89 | 3.8 | ATTTGTGGTGCGTGTCAGCTAA | ||
|
Position: -37
Score: 4.9 Sequence: ATCTGTGATCTAAATCACTTTT
Locus tag: Spro_4393
|
||||
| Spro_4393 | -37 | 4.9 | ATCTGTGATCTAAATCACTTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aaeR | ||||
| Ortholog function: LysR-family transcriptional regulator | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3243 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Salmonella typhimurium LT2 | STM3367 | -37 | 5.3 | TTATGTGATCTAAATCACTTTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04651 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03652 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Enterobacter sp. 638 | Ent638_3680 | -37 | 5.3 | ATATGTGATCTAAATCACTTTT |
| Erwinia amylovora ATCC 49946 | EAM_3128 | -37 | 5.3 | AAATGTGATCTAAATCACTTTT |
| Yersinia pestis KIM | y0180 | -55 | 5.1 | ATGTGTGATCTAAATCACTTTT |
| Serratia proteamaculans 568 | Spro_4393 | -37 | 4.9 | ATCTGTGATCTAAATCACTTTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0276 | -37 | 5.1 | TAGTGTGATCTAAATCACTTTT |
| Edwardsiella tarda EIB202 | ETAE_3129 | -131 | 4.5 | ATCTGTGACGCAAATCACTTTT |
|
Position: -116
Score: 3.7 Sequence: TTATTTGATAAAGATTATCAAA
Position: -4
Score: 3.9 Sequence: AATCATGAAAAACATCAAAATT
Locus tag: Spro_4435
|
||||
| Spro_4435 | -116 | 3.7 | TTATTTGATAAAGATTATCAAA | |
| -4 | 3.9 | AATCATGAAAAACATCAAAATT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ycfR | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1112 | -114 | 3.7 | ATTAATGATTGTTATAAAAAAT |
| -87 | 4.8 | GTATGTGATCCAGATCACATCT | ||
| Salmonella typhimurium LT2 | STM1214 | -88 | 4.7 | ACGTGTGATGTAGATCACATCT |
| Citrobacter koseri ATCC BAA-895 | CKO_01942 | -113 | 3.8 | TATAATGATCGTTATAAAAAAA |
| -86 | 4.5 | ACGTGTGACCTGGATCACATCT | ||
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01110 | -95 | 4.9 | ACGTGTGACATAGATCACATTA |
| Enterobacter sp. 638 | Ent638_1627 | -91 | 4.7 | ACGTGTGATGCAGATCACATCT |
| Serratia proteamaculans 568 | Spro_4435 | -116 | 3.7 | TTATTTGATAAAGATTATCAAA |
|
Position: -136
Score: 4.4 Sequence: CAATGTTAACTGGATCACACTA
Locus tag: Spro_4472
|
||||
| Spro_4472 | -136 | 4.4 | CAATGTTAACTGGATCACACTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malE | ||||
| Ortholog function: maltose ABC transporter periplasmic protein | ||||
| Yersinia pestis KIM | y0028 | -286 | 4.2 | TATTGTGCCTAACACCACAAAA |
| -257 | 4 | CAGTGTTAACTGAGTCACAATA | ||
| Serratia proteamaculans 568 | Spro_4472 | -199 | 4 | ATCTGTGATCTGCCTGGCAAAA |
| -165 | 3.6 | TTTTGTGTCTGACGCCACAGAA | ||
| -136 | 4.4 | CAATGTTAACTGGATCACACTA | ||
|
Position: -80
Score: 3.7 Sequence: AAAAGAGATCATAATCACAGTC
Locus tag: Spro_4477
|
||||
| Spro_4477 | -80 | 3.7 | AAAAGAGATCATAATCACAGTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pgi | ||||
| Ortholog function: Glucose-6-phosphate isomerase (EC 5.3.1.9) | ||||
| Salmonella typhimurium LT2 | STM4221 | -61 | 3.7 | TTCTGTGACTGGCGTTACAATC |
| Citrobacter koseri ATCC BAA-895 | CKO_03893 | -61 | 4.1 | TTTTGTGACTGGCGTTACAATC |
| Serratia proteamaculans 568 | Spro_4477 | -80 | 3.7 | AAAAGAGATCATAATCACAGTC |
| Proteus mirabilis HI4320 | PMI2754 | -245 | 3.7 | CAGTGAGATGTTAAACACAGTT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4379 | -205 | 3.8 | TGACGCGATGAGAATCATAAAA |
|
Position: -22
Score: 3.4 Sequence: ATTATTGAAAAGGATAAAAATT
Locus tag: Spro_4502
|
||||
| Spro_4502 | -22 | 3.4 | ATTATTGAAAAGGATAAAAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceA | ||||
| Ortholog function: isocitrate lyase | ||||
| Yersinia pestis KIM | y0016 | -254 | 3.3 | ATGAGTTATAGCCATTAAAAAT |
| Serratia proteamaculans 568 | Spro_4502 | -228 | 3.5 | TGTTGTTATGTTTATTAACCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3990 | -185 | 3.3 | TTTTTTAATTTTAATCTTCATT |
| Proteus mirabilis HI4320 | PMI2763 | -68 | 3.7 | ATTTTTGATTTTTGTAAAAACT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4395 | -65 | 3.8 | GTTTTTGATTTATTTTAAATAT |
|
Position: -228
Score: 3.5 Sequence: TGTTGTTATGTTTATTAACCAA
Locus tag: Spro_4503
|
||||
| Spro_4503 | -228 | 3.5 | TGTTGTTATGTTTATTAACCAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: aceB | ||||
| Ortholog function: malate synthase A | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4014 | -117 | 3.6 | AATTGTTTTTGATTTTGCATTT |
| Salmonella typhimurium LT2 | STM4183 | -168 | 3.3 | TTAATTTATATTGTTATCAATA |
| Citrobacter koseri ATCC BAA-895 | CKO_03906 | -166 | 3.3 | TATTTTTATTGTTATCAATAAG |
| Yersinia pestis KIM | y0015 | -254 | 3.3 | ATGAGTTATAGCCATTAAAAAT |
| Serratia proteamaculans 568 | Spro_4503 | -228 | 3.5 | TGTTGTTATGTTTATTAACCAA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3991 | -185 | 3.3 | TTTTTTAATTTTAATCTTCATT |
| Proteus mirabilis HI4320 | PMI2764 | -68 | 3.7 | ATTTTTGATTTTTGTAAAAACT |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4396 | -65 | 3.8 | GTTTTTGATTTATTTTAAATAT |
|
Position: -280
Score: 3.3 Sequence: GGTTTTGAGGCGTGTCATAAAT
Locus tag: Spro_4579
|
||||
| Spro_4579 | -280 | 3.3 | GGTTTTGAGGCGTGTCATAAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yhfA | ||||
| Ortholog function: hypothetical protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3356 | -187 | 4.2 | TAATGTGACGTCCTTTGCATAC |
| Salmonella typhimurium LT2 | STM3465 | -188 | 3.9 | TAATGTGATGTCCTCTGCATAC |
| Citrobacter koseri ATCC BAA-895 | CKO_04775 | -187 | 3.3 | GAATGTGATGTCCTCTGCATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03742 | -188 | 3.5 | TAATGTGAACTCCTCTGCATAC |
| Serratia proteamaculans 568 | Spro_4579 | -280 | 3.3 | GGTTTTGAGGCGTGTCATAAAT |
|
Position: -121
Score: 3.5 Sequence: ATTTATGACACGCCTCAAAACC
Position: -52
Score: 3 Sequence: AACTCTGACCCCTGTGACACAA
Locus tag: Spro_4580
|
||||
| Spro_4580 | -121 | 3.5 | ATTTATGACACGCCTCAAAACC | |
| -52 | 3 | AACTCTGACCCCTGTGACACAA | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: crp | ||||
| Ortholog function: cyclic AMP receptor protein | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3357 | -154 | 3.3 | TACATTGATGTACTGCATGTAT |
| -136 | 3.3 | GTATGCAAAGGACGTCACATTA | ||
| Salmonella typhimurium LT2 | STM3466 | -159 | 3.1 | TACATTGACGTACTGCATGTAT |
| Citrobacter koseri ATCC BAA-895 | CKO_04777 | -160 | 3.1 | TACATTGACGTACTGCATGTAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03743 | -158 | 3.3 | TACATTGATGTACTGCATGTAT |
| Enterobacter sp. 638 | Ent638_3784 | -128 | 2.9 | AAACATTACAGGCTGCAAACAT |
| Yersinia pestis KIM | y3956 | -309 | 3 | AATTTAGACTACCCTTTCATTT |
| Serratia proteamaculans 568 | Spro_4580 | -121 | 3.5 | ATTTATGACACGCCTCAAAACC |
| Proteus mirabilis HI4320 | PMI2820 | -135 | 3.3 | TATTATAATCTATTCCTTATTA |
|
Position: -181
Score: 3.9 Sequence: ATGCGTGATGCAGTTGGCAAAA
Locus tag: Spro_4589
|
||||
| Spro_4589 | -181 | 3.9 | ATGCGTGATGCAGTTGGCAAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ppiA | ||||
| Ortholog function: Peptidyl-prolyl cis-trans isomerase ppiA precursor (EC 5.2.1.8) | ||||
| Yersinia pestis KIM | y3951 | -247 | 4.5 | AAATGAGATATTTCTCGCAAAA |
| -81 | 3.6 | AAATGTGCATTCTGTTACGTAA | ||
| Serratia proteamaculans 568 | Spro_4589 | -181 | 3.9 | ATGCGTGATGCAGTTGGCAAAA |
|
Position: -135
Score: 4.4 Sequence: CAATGTGATCAAGATCGGATTT
Locus tag: Spro_4612
|
||||
| Spro_4612 | -135 | 4.4 | CAATGTGATCAAGATCGGATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nudE | ||||
| Ortholog function: ADP compounds hydrolase NudE (EC 3.6.1.-) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3397 | -53 | 3.7 | AAGCGTGTCCGATATCGCACAA |
| Citrobacter koseri ATCC BAA-895 | CKO_04820 | -54 | 4.1 | AACCGTGCTGTATATCGCACAA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03768 | -54 | 4 | AAGCGTGTTGCGTATCGCACAA |
| Enterobacter sp. 638 | Ent638_3810 | -55 | 3.6 | AACCGTGCGTCATATCGCACAA |
| Yersinia pestis KIM | y3923 | -247 | 4.5 | CAATGTGATCAAGTTCTAATAT |
| Serratia proteamaculans 568 | Spro_4612 | -135 | 4.4 | CAATGTGATCAAGATCGGATTT |
| Edwardsiella tarda EIB202 | ETAE_3268 | -116 | 3.6 | AAATATGAGCATCTGCGCACAA |
|
Position: -80
Score: 4.1 Sequence: ATATTTGATACCTATCGCGGTT
Locus tag: Spro_4617
|
||||
| Spro_4617 | -80 | 4.1 | ATATTTGATACCTATCGCGGTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pck | ||||
| Ortholog function: Phosphoenolpyruvate carboxykinase [ATP] (EC 4.1.1.49) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3403 | -240 | 4.2 | GAATGCGATTCCACTCACAATA |
| -137 | 4 | TTTCGTGACAGGAATCACGGAG | ||
| Salmonella typhimurium LT2 | STM3500 | -241 | 4 | GAATGCGATTACAGTCACATTA |
| -107 | 3.9 | AATCGTGATTTTGTCCAGATAC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_04825 | -107 | 3.9 | AATCGTGATTTTGTCCAGATAC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03773 | -242 | 3.7 | GAAAGCGATTACATTCACATTT |
| -138 | 3.7 | CTTCGTGACAGGAGTCACCGTT | ||
| Enterobacter sp. 638 | Ent638_3816 | -241 | 4.1 | GTATGCGATTACATTCACATTA |
| Yersinia pestis KIM | y3918 | -130 | 4.2 | ATTCGTGTTCCATCTCTCATAA |
| -80 | 3.8 | ATATTTGATAGCTATCGCTGTT | ||
| Serratia proteamaculans 568 | Spro_4617 | -80 | 4.1 | ATATTTGATACCTATCGCGGTT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4106 | -81 | 4 | TTTTATGATTGCTATCGCGGTT |
| Edwardsiella tarda EIB202 | ETAE_3277 | -82 | 3.9 | TTTTTTGATGACTATCTCGGTT |
| Proteus mirabilis HI4320 | PMI3015 | -131 | 4 | ATTTGTGCATTAGTTCTCGTTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu0100 | -86 | 3.8 | TTTTTTGATAACTATCGCTGTT |
|
Position: -139
Score: 4.4 Sequence: AAAAGTGCCTGAGATCACAATT
Locus tag: Spro_4636
|
||||
| Spro_4636 | -139 | 4.4 | AAAAGTGCCTGAGATCACAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malP | ||||
| Ortholog function: maltodextrin phosphorylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3417 | -141 | 4.5 | TTAAGTGGTTGAGATCACATTT |
| Citrobacter koseri ATCC BAA-895 | CKO_04838 | -139 | 4 | TTAAGTGGCGGCGATCACACTT |
| Serratia proteamaculans 568 | Spro_4636 | -139 | 4.4 | AAAAGTGCCTGAGATCACAATT |
|
Position: -203
Score: 4 Sequence: AAGTGTGATCAATAGCAATATA
Locus tag: Spro_4637
|
||||
| Spro_4637 | -203 | 4 | AAGTGTGATCAATAGCAATATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: malT | ||||
| Ortholog function: transcriptional regulator MalT | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3418 | -142 | 4.3 | AATTGTGACACAGTGCAAATTC |
| Salmonella typhimurium LT2 | STM3515 | -143 | 4.3 | AATTGTGACAGAGTGCAAATTC |
| Citrobacter koseri ATCC BAA-895 | CKO_04840 | -142 | 4.3 | AATTGTGACAGAGTGCAAATTC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03788 | -142 | 4.4 | ATTTGTGACATAGAGCAAATTC |
| Enterobacter sp. 638 | Ent638_3831 | -142 | 4.6 | AATTGTGACAGAGTGCAAATTA |
| Yersinia pestis KIM | y3900 | -202 | 4.6 | AATTGTGATCCGTAGCAACTTA |
| Serratia proteamaculans 568 | Spro_4637 | -203 | 4 | AAGTGTGATCAATAGCAATATA |
| Edwardsiella tarda EIB202 | ETAE_3303 | -212 | 3.8 | AAATGTGATCAGCCGCAATTTC |
|
Position: -129
Score: 3.6 Sequence: AACTGTTACCTCTATCACGCCT
Locus tag: Spro_4642
|
||||
| Spro_4642 | -129 | 3.6 | AACTGTTACCTCTATCACGCCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpD | ||||
| Ortholog function: glycerol-3-phosphate dehydrogenase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3426 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Salmonella typhimurium LT2 | STM3526 | -116 | 4.4 | TAATGTTATACATATCACTCTA |
| Citrobacter koseri ATCC BAA-895 | CKO_04845 | -116 | 4.5 | TAATGTTATATGTATCACTCTA |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_03792 | -119 | 3.7 | ATATGTTACACCCATCACTTCA |
| -58 | 3.7 | TATAGTGAGCGATATCGAGCAT | ||
| Enterobacter sp. 638 | Ent638_3835 | -116 | 4.4 | TTATGTTATCTCTATCACTCAA |
| -55 | 4 | TATTATGAGCGATATCGAACAT | ||
| Erwinia amylovora ATCC 49946 | EAM_3265 | -124 | 4 | AGACGTTATCGGCATCACGCAT |
| Yersinia pestis KIM | y3891 | -129 | 4.4 | AAATGTTACCTCCATCACGCAT |
| Serratia proteamaculans 568 | Spro_4642 | -129 | 3.6 | AACTGTTACCTCTATCACGCCT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4141 | -144 | 4.3 | TAATGTGACAACTATCATCATA |
| -124 | 4.4 | TATTGTTAGCTTCATCACGCAT | ||
| Edwardsiella tarda EIB202 | ETAE_3312 | -124 | 4.3 | TTGTGTTATCCGCATCGCGTAA |
| Proteus mirabilis HI4320 | PMI2930 | -129 | 4.4 | AATTGTTATTTATATCACGCAG |
|
Position: -243
Score: 4.2 Sequence: AAGTTTGATCTCTATCCCAGAA
Locus tag: Spro_4651
|
||||
| Spro_4651 | -243 | 4.2 | AAGTTTGATCTCTATCCCAGAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: gntT | ||||
| Ortholog function: gluconate transporter | ||||
| Yersinia pestis KIM | y3875 | -217 | 4 | TATGTTGATCTCTATCTCAGAA |
| -147 | 4.1 | TATCATGATACCGGTAACAAAT | ||
| -123 | 4.6 | AGATGTGACTTTTATCACAACA | ||
| Serratia proteamaculans 568 | Spro_4651 | -243 | 4.2 | AAGTTTGATCTCTATCCCAGAA |
| -173 | 3.8 | TATCATGATACCGGTAACAATG | ||
| -147 | 3.7 | TGCGGTGATATTGATCGCGATA | ||
|
Position: -123
Score: 4 Sequence: CAGTGTGATCGCCTCAACATAT
Locus tag: Spro_4691
|
||||
| Spro_4691 | -123 | 4 | CAGTGTGATCGCCTCAACATAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: uspA3 | ||||
| Ortholog function: Universal stress protein A | ||||
| Enterobacter sp. 638 | Ent638_3909 | -195 | 3.8 | AAAGTCGATCGGGTTCACGTTT |
| Yersinia pestis KIM | y3859 | -151 | 3.6 | ATTAGTGATCATTGTCAAAACC |
| Serratia proteamaculans 568 | Spro_4691 | -123 | 4 | CAGTGTGATCGCCTCAACATAT |
| Proteus mirabilis HI4320 | PMI3009 | -290 | 3.6 | AGTTGTTCGCTTTTTCAAAAAA |
| -113 | 3.8 | AGTTGTGATCAAGGCAACATCT | ||
|
Position: -163
Score: 4.3 Sequence: TGATGTGATGCCGCTCATTATT
Locus tag: Spro_4768
|
||||
| Spro_4768 | -163 | 4.3 | TGATGTGATGCCGCTCATTATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ytfQ | ||||
| Ortholog function: Putative sugar ABC transport system, periplasmic binding protein YtfQ precursor | ||||
| Escherichia coli str. K-12 substr. MG1655 | b4227 | -98 | 3.7 | AAGTGTGATGTAACGCAATCTG |
| Citrobacter koseri ATCC BAA-895 | CKO_03603 | -130 | 3.7 | AGTTGTGATTAACCTTTTATTT |
| Yersinia pestis KIM | y0328 | -229 | 3.8 | TGGTGTGACGCCGCTCATTATT |
| Serratia proteamaculans 568 | Spro_4768 | -163 | 4.3 | TGATGTGATGCCGCTCATTATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4236 | -68 | 3.7 | TATTGTTAGCCTACTTACCATA |
|
Position: -167
Score: 4 Sequence: TATTGTGAATAAAAATACAATA
Locus tag: Spro_4781
|
||||
| Spro_4781 | -167 | 4 | TATTGTGAATAAAAATACAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argC | ||||
| Ortholog function: N-acetyl-gamma-glutamyl-phosphate reductase (EC 1.2.1.38) | ||||
| Salmonella typhimurium LT2 | STM4121 | -44 | 3.5 | AATTATGAATAAAAATACATTA |
| Citrobacter koseri ATCC BAA-895 | CKO_03036 | -110 | 4 | ATTTGTGAATAAAAATACATTA |
| Enterobacter sp. 638 | Ent638_4028 | -44 | 3.8 | AAATGTGAATAAAAATACACTA |
| Yersinia pestis KIM | y0310 | -43 | 3.7 | TTTATTGACATAAATAAAAATA |
| Serratia proteamaculans 568 | Spro_4781 | -167 | 4 | TATTGTGAATAAAAATACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0192 | -159 | 3.5 | TATTTTGAATAAAAATACAATA |
| Edwardsiella tarda EIB202 | ETAE_3482 | -160 | 3.4 | AATTATGAATAAAAATACAATA |
| Proteus mirabilis HI4320 | PMI3237 | -57 | 3.6 | TTTTTTGAATAAAAATACATTA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4744 | -59 | 3.6 | TTTTTTGAATAAAAATACATTA |
|
Position: -71
Score: 4.3 Sequence: TATTGTATTTTTATTCACAATA
Locus tag: Spro_4782
|
||||
| Spro_4782 | -71 | 4.3 | TATTGTATTTTTATTCACAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: argE | ||||
| Ortholog function: acetylornithine deacetylase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3957 | -66 | 3.7 | TAGTGTATTTTTATTCATAAAT |
| Salmonella typhimurium LT2 | STM4120 | -66 | 3.9 | TAATGTATTTTTATTCATAATT |
| Citrobacter koseri ATCC BAA-895 | CKO_03037 | -27 | 4.3 | TAATGTATTTTTATTCACAAAT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04246 | -27 | 4 | TATTGTATTTTTATTCAAAATA |
| Enterobacter sp. 638 | Ent638_4029 | -66 | 4.2 | TAGTGTATTTTTATTCACATTT |
| Erwinia amylovora ATCC 49946 | EAM_0137 | -66 | 3.8 | TATTGTATTTTTATTCACTATT |
| Yersinia pestis KIM | y0309 | -223 | 3.6 | TATTTTTATTTATGTCAATAAA |
| Serratia proteamaculans 568 | Spro_4782 | -71 | 4.3 | TATTGTATTTTTATTCACAATA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0191 | -65 | 4 | TATTGTATTTTTATTCAAAATA |
| Edwardsiella tarda EIB202 | ETAE_3483 | -65 | 3.9 | TATTGTATTTTTATTCATAATT |
| Proteus mirabilis HI4320 | PMI3236 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu4745 | -65 | 3.9 | TAATGTATTTTTATTCAAAAAA |
|
Position: -183
Score: 4.1 Sequence: TTTTATGACGAAGCACACACAT
Locus tag: Spro_4797
|
||||
| Spro_4797 | -183 | 4.1 | TTTTATGACGAAGCACACACAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glpF | ||||
| Ortholog function: facilitator for glycerol uptake | ||||
| Yersinia pestis KIM | y0046 | -139 | 4 | TTTCATGACGAATAACACATAT |
| Serratia proteamaculans 568 | Spro_4797 | -183 | 4.1 | TTTTATGACGAAGCACACACAT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA4266 | -153 | 4.3 | TTTTTTGACGCGCAACACACAT |
| Edwardsiella tarda EIB202 | ETAE_3441 | -139 | 3.9 | TTTTTTGACGACACACACACAT |
|
Position: -267
Score: 4 Sequence: GTATGTGATCCCTTTCACGGTG
Locus tag: Spro_4881
|
||||
| Spro_4881 | -267 | 4 | GTATGTGATCCCTTTCACGGTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: glnA | ||||
| Ortholog function: glutamine synthetase | ||||
| Escherichia coli str. K-12 substr. MG1655 | b3870 | -269 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| Salmonella typhimurium LT2 | STM4007 | -272 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| -114 | 3.8 | CAATGTGAAAGTTGGCACAGAT | ||
| Citrobacter koseri ATCC BAA-895 | CKO_03140 | -250 | 4.2 | CTTTGTGATCGCTTTCACGGAG |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04178 | -299 | 3.9 | CTTTGTGACCGCTTTCACGGAG |
| Serratia proteamaculans 568 | Spro_4881 | -267 | 4 | GTATGTGATCCCTTTCACGGTG |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0029 | -265 | 4.2 | CTTTGTGATCCCTTTCACGGTG |
| Edwardsiella tarda EIB202 | ETAE_3493 | -267 | 4.2 | GTTTGTGATCCTATTCACGATG |
| Proteus mirabilis HI4320 | PMI2882 | -270 | 4.7 | AATTGTGATCCTTTTCACGCCT |
| -215 | 3.8 | AATTGTGCAACTATTCAGACTT | ||
| -181 | 3.9 | ATTTGTGCAATAATTAAAAAAT | ||