Propagation of Fnr regulog to Buchnera aphidicola str. Sg (Schizaphis graminum)

Reference regulog properties
Source regulog:	Fnr - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator (repressor)
Biological process:	Energy metabolism; Anaerobic metabolism
Effector:	Oxygen
Phylum:	Gammaproteobacteria
Propagated regulon:
Target genome	Buchnera aphidicola str. Sg (Schizaphis graminum)
Orthologous TF(s)	No orthologous TFs found
Regulated genes	23

Built upon 685 sites [see more]

Predicted regulatory interactions in *Buchnera aphidicola str. Sg (Schizaphis graminum)*
	Locus tag	Position	Score	Sequence
Position: -206 Score: 3.3 Sequence: ATCTTTGATAACAA Position: -150 Score: 3.3 Sequence: TTTTTTTCAAAAAA Locus tag: BUsg100
	BUsg100	-206	3.3	ATCTTTGATAACAA
		-150	3.3	TTTTTTTCAAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Citrobacter koseri ATCC BAA-895	CKO_00756	-337	4	TTGATTACTATCTA
Enterobacter sp. 638	Ent638_2642	-112	3.7	GTGACATAGATCAG
Erwinia amylovora ATCC 49946	EAM_2150	-264	3.8	TTCTCTTAAGTCAA
		-169	4	TTTTTTTTAAACAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1444	-228	3.3	TTGAGTGGTAACAT
Escherichia coli str. K-12 substr. MG1655	b2029	-375	3.4	ATGGCTTCGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02499	-322	3.7	TTTTTATAGTTCAA
Proteus mirabilis HI4320	PMI0655	-7	3.7	TTATTTCATGTCAA
Serratia proteamaculans 568	Spro_1608	-384	3.3	ATTATTTGAATTAA

Position: -199 Score: 3.7 Sequence: TTTTTTAACCTCAA Position: -179 Score: 3.9 Sequence: TTCATTTTAATAAA Position: -132 Score: 3.8 Sequence: TTTATTTTTATTAA Position: -82 Score: 3.5 Sequence: TTGATTTTTACTAA Locus tag: BUsg147
	BUsg147	-199	3.7	TTTTTTAACCTCAA
		-179	3.9	TTCATTTTAATAAA
		-132	3.8	TTTATTTTTATTAA
		-82	3.5	TTGATTTTTACTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoA
Ortholog function: NADH ubiquinone oxidoreductase chain A (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00508	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2385	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2288	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02678	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3089	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2328	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3308	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1630	-465	3.6	TTTTATTAAAACAA

Position: 28 Score: 3.6 Sequence: CTAATTTAAATAAA Locus tag: BUsg149
	BUsg149	28	3.6	CTAATTTAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoD
Ortholog function: NADH-ubiquinone oxidoreductase chains C and D (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00510	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2383	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2286	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02676	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3087	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2326	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3306	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1632	-465	3.6	TTTTATTAAAACAA

Position: -68 Score: 3.6 Sequence: TTTATATAAATAAT Position: -38 Score: 3.9 Sequence: TTTATAAAAATAAA Locus tag: BUsg152
	BUsg152	-68	3.6	TTTATATAAATAAT
		-38	3.9	TTTATAAAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoG
Ortholog function: NADH-ubiquinone oxidoreductase chain G (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00513	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2380	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2283	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02673	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3084	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2323.S	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3303	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1635	-465	3.6	TTTTATTAAAACAA

Position: 20 Score: 4 Sequence: TTTATTTTTATCAT Locus tag: BUsg156
	BUsg156	20	4	TTTATTTTTATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoK
Ortholog function: NADH-ubiquinone oxidoreductase chain K (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00517	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2376	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2279	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02669	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3080	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2319	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3299	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1639	-465	3.6	TTTTATTAAAACAA

Position: 23 Score: 3.7 Sequence: TTTATTTCCATTAA Locus tag: BUsg157
	BUsg157	23	3.7	TTTATTTCCATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: nuoL
Ortholog function: NADH-ubiquinone oxidoreductase chain L (EC 1.6.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00518	-198	4	TCGATGTAAATTAA
Edwardsiella tarda EIB202	ETAE_2375	-292	3.7	TTGATGTAAACGAA
Escherichia coli str. K-12 substr. MG1655	b2278	-433	3.7	ATGATGTTAAAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02668	-392	3.6	TTGATTTACGACGG
Photorhabdus luminescens subsp. laumondii TTO1	plu3079	-207	3.8	TTGTTATTTGTAAA
Salmonella typhimurium LT2	STM2318	-199	4.6	TTGATGTAAATTAA
Serratia proteamaculans 568	Spro_3298	-280	3.8	TTTCTACACATCAA
Yersinia pestis KIM	y1640	-465	3.6	TTTTATTAAAACAA

Position: -282 Score: 3.8 Sequence: TTTATTTTTATTAA Locus tag: BUsg183
	BUsg183	-282	3.8	TTTATTTTTATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sodA
Ortholog function: Manganese superoxide dismutase (EC 1.15.1.1)
Enterobacter sp. 638	Ent638_4063	-132	3.6	ATGATACAAAAAAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0092	-143	3.5	ATGAAGTAAAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04217	-146	4.2	TTGTTCTACATCAC
Photorhabdus luminescens subsp. laumondii TTO1	plu0075	-346	3.6	TTATGTCAAATCAA
Proteus mirabilis HI4320	PMI3036	-164	3.8	TTTATTTAAAATAA
		-85	4	ATGATTTTCATTAA

Position: -117 Score: 4.3 Sequence: TTGTAGTAAATCAA Locus tag: BUsg199
	BUsg199	-117	4.3	TTGTAGTAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceE
Ortholog function: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Citrobacter koseri ATCC BAA-895	CKO_03259	-133	4.6	ATGTTGTAAATCAA
Edwardsiella tarda EIB202	ETAE_0659	-165	4.5	TTGATTGTTAACAA
		-139	5	ATGATTTACATCAA
Enterobacter sp. 638	Ent638_0660	-116	4.7	CTGATTTCAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3789	-116	4.2	GTGATTTAGCTCAA
Escherichia coli str. K-12 substr. MG1655	b0114	-131	4.6	ATGTTGTAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00118	-114	4.7	CTGATTTCAATCAA
Proteus mirabilis HI4320	PMI2046	-245	4	ATGTGTTTAATCAA
		-134	4.2	ATGATTTCGCTCAA
Salmonella typhimurium LT2	STM0152	-116	4.7	CTGATTTCAATCAA
Serratia proteamaculans 568	Spro_4011	-117	4.6	CTGATTTCGATCAA
Yersinia pestis KIM	y0767	-135	4.4	ATGATTTCGGTCAA

Position: 25 Score: 3.3 Sequence: ATAATTTTGATAAA Position: 31 Score: 4 Sequence: TTGATAAAGAAAAA Locus tag: BUsg453
	BUsg453	25	3.3	ATAATTTTGATAAA
		31	4	TTGATAAAGAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: cyoD
Ortholog function: Cytochrome O ubiquinol oxidase subunit IV (EC 1.10.3.-)
Citrobacter koseri ATCC BAA-895	CKO_02732	-267	3.7	TTGTTGATAATTAA
Erwinia amylovora ATCC 49946	EAM_0982	-207	3.7	GTTATTTAAATCAG
Escherichia coli str. K-12 substr. MG1655	b0429	-241	3.7	TTGTTTTATTTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00391	-49	3.7	TTGAGGTCGTTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu3878	-336	3.8	TTGTGAGCTATCAA
Proteus mirabilis HI4320	PMI0105A	9	3.6	ATGAAATACATAAA
Salmonella typhimurium LT2	STM0440	-268	3.4	TTTATTGATAATAA
Serratia proteamaculans 568	Spro_1087	-293	3.6	TTCTTTTACATTAA

Position: -84 Score: 4.5 Sequence: TTGATAAAAATAAA Locus tag: BUsg565
	BUsg565	-84	4.5	TTGATAAAAATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: prmC
Ortholog function: Protein-N(5)-glutamine methyltransferase PrmC, methylates polypeptide chain release factors RF1 and RF2
Enterobacter sp. 638	Ent638_2336	-82	4.3	TTGTCTTAAATCAT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2191	-134	4.8
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02233	-143	4.4	TTGTCTGAAATCAA
Salmonella typhimurium LT2	STM1775	-131	4.3	TTGTCTTAAATCAT

Position: 22 Score: 4.1 Sequence: CTGATTTGAATCAT Locus tag: BUsg566
	BUsg566	22	4.1	CTGATTTGAATCAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: pitA
Ortholog function: Phosphate transporter, low-affinity
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0048	-140	4	TTGATTTATATTGA
Escherichia coli str. K-12 substr. MG1655	b3493	-116	3.8	TTGAGTGAAATCCA
Salmonella typhimurium LT2	STM3589	-116	4.2	GTGATATCAAACAA
Yersinia pestis KIM	y3862	-201	4.1	TTGAATAAAATCAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Buchnera aphidicola str. Sg (Schizaphis graminum)

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --