Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of IscR regulog to Escherichia coli O157:H7 str. EC4042

Reference regulog properties
Source regulog: IscR - Enterobacteriales
Regulator type: Transcription factor
Regulator family: Rrf2
Regulation mode: activator (repressor)
Biological process: Iron-sulfur cluster biogenesis
Effector: Iron-sulfur cluster redox state
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Escherichia coli O157:H7 str. EC4042
Orthologous TF(s) EschercoliO157_010100016215
Regulated genes 2
Built upon 45 sites [see more]
Predicted regulatory interactions in Escherichia coli O157:H7 str. EC4042
Locus tag Position Score Sequence
Position: -37
Score: 6.9
Sequence: ATAACCAACTAAAATAGTCAACTAT
Locus tag: EschercoliO157_010100003075
EschercoliO157_010100003075 -37 6.9 ATAACCAACTAAAATAGTCAACTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nfuA
Ortholog function: NfuA Fe-S protein maturation
Escherichia coli str. K-12 substr. MG1655 b3414 -37 6.9 ATAACCAACTAAAATAGTCAACTAT
Salmonella typhimurium LT2 STM3511 -37 6.9 ATAACCAACTAAAATAGTCAACTAT
Citrobacter koseri ATCC BAA-895 CKO_04835 -37 6.7 ATAACCAAGTAAAATAGTCAACTAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_03784 -37 6.5 ATAACCCAGTAAAATAGTCAACTAT
Enterobacter sp. 638 Ent638_3827 -37 6.1 ATACCCAAGTATTTTAGTCAACTAT
Erwinia amylovora ATCC 49946 EAM_3259 -37 6.7 ATAACCAACTGAATTAGTCAACTAT
Yersinia pestis KIM y3903 -37 6.3 ATAACCGACAAGAGTAGTCAACTAT
Serratia proteamaculans 568 Spro_4634 -46 5.7 ATAACCTAGTATAGAAGTCAACTAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA4134 -38 5.6 ATAACCGATAAGTGCAGTCAACTAT
Edwardsiella tarda EIB202 ETAE_3288 -37 5.9 ATAACCGACCGGAGAAGTCAACTAT
Proteus mirabilis HI4320 PMI2926 -38 6.3 ATAACCAACCAGAACAGTCAACTAT
Photorhabdus luminescens subsp. laumondii TTO1 plu0198 -37 6.3 ATAACCAACTATAGCAGTCAACTAT
Position: -133
Score: 6.7
Sequence: ATACCCGACTAAATCAGTCAAGTAA
Position: -108
Score: 5.8
Sequence: ATAGTTGACCAATTTACTCGGGAAT
Locus tag: EschercoliO157_010100016215
EschercoliO157_010100016215 -133 6.7 ATACCCGACTAAATCAGTCAAGTAA
-108 5.8 ATAGTTGACCAATTTACTCGGGAAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: iscR
Ortholog function: Iron-sulfur cluster regulator IscR
Escherichia coli str. K-12 substr. MG1655 b2531 -133 6.7 ATACCCGACTAAATCAGTCAAGTAA
-108 5.8 ATAGTTGACCAATTTACTCGGGAAT
Salmonella typhimurium LT2 STM2544 -132 6.5 ATACCTGACTAATTTACTCAAGTAA
-107 6.1 ATAGTTGACCAAATTACTCGGGAAT
Citrobacter koseri ATCC BAA-895 CKO_00250 -132 6.8 ATACCTGACTAAATTAGTCAAGTAA
-107 6 ATAGTTGACTGATTTAGTCGGGAAT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02863 -127 6.8 ATACCTGACTAAAACAGTCAAGTAA
-102 6.1 ATAGTTGACCAAATTACTCGGGAAT
Enterobacter sp. 638 Ent638_3028 -131 6.8 ATACCTGACTAAAACAGTCAAGTAA
-106 5.9 ATAGTTGACCAATTTAGTCGGGAAT
Erwinia amylovora ATCC 49946 EAM_2493 -138 4.9 ATAGTTGAGTAAATTACCAGGTTAA
-88 5.9 ATACTTGACCAATTTACTCGGGAAT
Yersinia pestis KIM y1333 -29 5.3 ATAGTTGAGTGAATTACTAGGTTAA
-4 6.6 ATAGTTGACTAAAACACTCAAGAAT
Serratia proteamaculans 568 Spro_3628 -94 5.4 ATACTTGAGTAAATTACTAGGTTAA
-69 6.2 ATAGTTGACTGATTTACTCAGGAAT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3238 -105 5.2 ATACTTGAGTGTTTTACTCGGTTAA
-80 6.2 ATAGTTGACTAAAACACTCGGGAAT
Edwardsiella tarda EIB202 ETAE_2816 -114 5.7 ATACCTGACTAAAATAGTAGGATAA
-89 6.6 ATAGTTGACTGAAATAGTCAGGAAT
Proteus mirabilis HI4320 PMI1861 -88 6.2 ATACCTGACTAAAACACTCAGATAA
-63 6.6 ATAGTTGACTAAATTACTCAGGAAT
Photorhabdus luminescens subsp. laumondii TTO1 plu3284 -90 5.4 ATAGTTGAGTAAATTACTAGGTTAA
-65 6.6 ATAGTTGACTAAAATACTCAGGAAT
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