Propagation of NsrR regulog to Providencia alcalifaciens DSM 30120
| Source regulog: | NsrR - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | Rrf2 |
| Regulation mode: | repressor |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Phylum: | Proteobacteria/gamma |
| Propagated regulon: | |
| Target genome | Providencia alcalifaciens DSM 30120 |
| Orthologous TF(s) | PROVALCAL_01009 |
| Regulated genes | 7 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -133
Score: 4 Sequence: TTGGCATATAAAATCTAAT
Position: -12
Score: 5 Sequence: GATATATATTAAATGTATC
Locus tag: PROVALCAL_01098
|
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| PROVALCAL_01098 | -133 | 4 | TTGGCATATAAAATCTAAT | |
| -12 | 5 | GATATATATTAAATGTATC | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ygbA | ||||
| Ortholog function: hypothetical protein involved in nitrosative stress | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2732 | -38 | 5.1 | GATGTAATATAAATACATC |
| Salmonella typhimurium LT2 | STM2860 | -40 | 4.4 | GGTGTAAAATAAATACACC |
| Enterobacter sp. 638 | Ent638_3209 | -39 | 4.1 | GATGTATTATTTATGCACA |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2415 | -39 | 5.6 | ATTGTATTTAAAATGCATC |
| Proteus mirabilis HI4320 | PMI1959 | -215 | 3.7 | ATTGTTTGTTAAATAAAAT |
| -38 | 5.8 | AATGCATTTTAAATGCAAC | ||
|
Position: -63
Score: 5.7 Sequence: GTTGCATATAAAATACATG
Locus tag: PROVALCAL_01704
|
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| PROVALCAL_01704 | -63 | 5.7 | GTTGCATATAAAATACATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmp | ||||
| Ortholog function: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) | ||||
| Escherichia coli str. K-12 substr. MG1655 | b2552 | -47 | 5.7 | GATGCATTTGAGATACATC |
| Salmonella typhimurium LT2 | STM2556 | -79 | 4.8 | GATCCATTTACAATGCAAG |
| -47 | 5.8 | GATGCATTTGATATACATC | ||
| Citrobacter koseri ATCC BAA-895 | CKO_00235 | -47 | 5.5 | GATGTATTTGACATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02877 | -47 | 6.3 | GATGCATTTAAAATGCATC |
| Enterobacter sp. 638 | Ent638_3037 | -47 | 6.2 | GATGCATATAAAATACATC |
| Yersinia pestis KIM | y1321 | -58 | 6.1 | GATGCATTTAAAATACATG |
| Serratia proteamaculans 568 | Spro_3639 | -59 | 6 | GATGCATTTAAAATGCATT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3251 | -51 | 5.9 | GATTCATATAAAATACAAC |
| Edwardsiella tarda EIB202 | ETAE_2822 | -45 | 6.2 | GTTGCATTTAAAATACAAC |
| Proteus mirabilis HI4320 | PMI1868 | -61 | 5.4 | GTTGTATTAAAAATACATG |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3292 | -64 | 5.4 | GTTGCATTTAAATTACATG |
|
Position: -172
Score: 3.9 Sequence: GTCCTATATCAAATATTAC
Position: -120
Score: 3.9 Sequence: AATACATAATAAATATCAT
Locus tag: PROVALCAL_03162
|
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| PROVALCAL_03162 | -172 | 3.9 | GTCCTATATCAAATATTAC | |
| -120 | 3.9 | AATACATAATAAATATCAT | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: sufA | ||||
| Ortholog function: Iron binding protein SufA for iron-sulfur cluster assembly | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1684 | -248 | 4.1 | TAGTCATTTTCAATACAAC |
| Salmonella typhimurium LT2 | STM1369 | -248 | 3.8 | TAGTCATTTTCTATACATC |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02141 | -116 | 4 | TATGCTTATAAAAAGCACT |
| Enterobacter sp. 638 | Ent638_1760 | -249 | 3.8 | TAGGCATTATCTATACATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu2622 | -191 | 3.9 | AATAAATTAAAGATATACC |
|
Position: -12
Score: 6.1 Sequence: GATGTATTTAAAATGCAAC
Locus tag: PROVALCAL_03818
|
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| PROVALCAL_03818 | -12 | 6.1 | GATGTATTTAAAATGCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tehB | ||||
| Ortholog function: Tellurite resistance protein TehB | ||||
| Escherichia coli str. K-12 substr. MG1655 | b1430 | -47 | 5.4 | AATGCATTTCAAATATACT |
| Salmonella typhimurium LT2 | STM1608 | -35 | 5.4 | AATGCATTTCAAATATACT |
| Citrobacter koseri ATCC BAA-895 | CKO_01467 | -35 | 5.6 | AATGCATTTAAAATATACT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_01940 | -47 | 5 | GGTTCCTTTAAAATGCAAC |
| Enterobacter sp. 638 | Ent638_1975 | -35 | 5.2 | CTAGCATTTCAAATATAAT |
| Proteus mirabilis HI4320 | PMI2116 | -36 | 6.1 | GATGTATTTAAAATGCATC |
| Photorhabdus luminescens subsp. laumondii TTO1 | plu3742 | -39 | 5.7 | GATGCATTTTAAATGTAAT |
|
Position: -104
Score: 5.5 Sequence: GTTGTATATGAAATGCAAC
Locus tag: PROVALCAL_03820
|
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| PROVALCAL_03820 | -104 | 5.5 | GTTGTATATGAAATGCAAC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hcp | ||||
| Ortholog function: Hydroxylamine reductase (EC 1.7.-.-) | ||||
| Yersinia pestis KIM | y2819 | -90 | 4.7 | ATTGCATTAAAAATACCTT |
| -38 | 5.3 | CACGCATTACAAATACAAC | ||
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA2662 | -38 | 5.8 | CAAGCATTTAAAATGCAAC |
| Edwardsiella tarda EIB202 | ETAE_2215 | -37 | 5.2 | CAAGCATAATAAATGCAAC |
| Proteus mirabilis HI4320 | PMI2112 | -58 | 5.3 | GTTGCATATTTAATGCAAC |