Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of NarP regulog to Providencia alcalifaciens DSM 30120

Reference regulog properties
Source regulog: NarP - Enterobacteriales
Regulator type: Transcription factor
Regulator family: LuxR
Regulation mode: activator (repressor)
Biological process: Nitrate and nitrite respiration
Effector: Nitrate; Nitrite
Phylum: Proteobacteria/gamma
Propagated regulon:
Target genome Providencia alcalifaciens DSM 30120
Orthologous TF(s) PROVALCAL_01929
Regulated genes 12
Built upon 125 sites [see more]
Predicted regulatory interactions in Providencia alcalifaciens DSM 30120
Locus tag Position Score Sequence
Position: -151
Score: 4.6
Sequence: TACTCATTAAGTGGTA
Locus tag: PROVALCAL_00928
PROVALCAL_00928 -151 4.6 TACTCATTAAGTGGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: Formate dehydrogenase N, alpha subunit (EC 1.2.1.2)
Escherichia coli str. K-12 substr. MG1655 b1474 -141 4.3 TACCGCTATTGAGGTA
Salmonella typhimurium LT2 STM1570 -188 4.1 TACCTCCCTGGAGTTA
Position: -324
Score: 3.5
Sequence: TAATCATTTGAAATTA
Locus tag: PROVALCAL_02812
PROVALCAL_02812 -324 3.5 TAATCATTTGAAATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dmsA
Ortholog function: Dimethyl sulfoxide reductase, chain A (EC 1.8.99.-)
Escherichia coli str. K-12 substr. MG1655 b0894 -180 3.4 TACCGAACAATAATTA
Salmonella typhimurium LT2 STM0964 -161 4.6 TACCCTATTAGGGGTA
Citrobacter koseri ATCC BAA-895 CKO_02177 -166 5.2 TACCCCTTTGGGGGTA
Position: -329
Score: 4.4
Sequence: TACCACTTTAGTGGTA
Position: -126
Score: 4.3
Sequence: TACCTACTAGGTAGTA
Locus tag: PROVALCAL_03790
PROVALCAL_03790 -329 4.4 TACCACTTTAGTGGTA
-126 4.3 TACCTACTAGGTAGTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: napF
Ortholog function: Periplasmic nitrate reductase, ferredoxin-type protein NapF
Escherichia coli str. K-12 substr. MG1655 b2208 -129 4.6 TACCCCGATCGGGGTA
Salmonella typhimurium LT2 STM2261 -132 4.8 TACCTCTATCGGGGTA
Yersinia pestis KIM y1442 -158 4.3 TACTCATTATTCGGTA
Serratia proteamaculans 568 Spro_3488 -322 4.7 TACCCCTTTAGGGGGA
Erwinia carotovora subsp. atroseptica SCRI1043 ECA1898 -111 4.4 TACCTCTAAAGGGTGA
Edwardsiella tarda EIB202 ETAE_1114 -156 3.9 TAACCCAAAAGAGGAA
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