Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of RhaS regulog to Cronobacter turicensis z3032

Reference regulog properties
Source regulog: RhaS - Enterobacteriales
Regulator type: Transcription factor
Regulator family: AraC
Regulation mode: activator
Biological process: Rhamnose utilization
Effector: Rhamnose
Phylum: Proteobacteria
Propagated regulon:
Target genome Cronobacter turicensis z3032
Orthologous TF(s) Ctu_01580
Regulated genes 2
Built upon 31 sites [see more]
Predicted regulatory interactions in Cronobacter turicensis z3032
Locus tag Position Score Sequence
Position: -139
Score: 8.5
Sequence: ACCCCCTGTTTTTTGCCA-(15)-CGGCAGCGCCCCGAAGGT
Locus tag: Ctu_01600
Ctu_01600 -139 8.5 ACCCCCTGTTTTTTGCCA-(15)-CGGCAGCGCCCCGAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhaT
Ortholog function: L-rhamnose:proton symporter
Citrobacter koseri ATCC BAA-895 CKO_03094 -126 8.5 ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT
Enterobacter sp. 638 Ent638_4064 -127 8.3 TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA0450 -171 8.4 ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT
Escherichia coli str. K-12 substr. MG1655 b3907 -123 9.3 TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_04216 -127 8.6 TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC
Salmonella typhimurium LT2 STM4050 -271 9.7 TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT
-127 7.8 TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT
Yersinia pestis KIM y0593 -149 9.3 ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT
Position: -32
Score: 10.6
Sequence: CTCTTTGTATTTTTGCCA-(15)-TGGCAGAAAAGGAAAGGT
Locus tag: Ctu_25690
Ctu_25690 -32 10.6 CTCTTTGTATTTTTGCCA-(15)-TGGCAGAAAAGGAAAGGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: rhiT
Ortholog function: Rhamnogalacturonide transporter
Citrobacter koseri ATCC BAA-895 CKO_01081 -147 11 CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT
Enterobacter sp. 638 Ent638_2444 -146 11.1 CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT
Erwinia carotovora subsp. atroseptica SCRI1043 ECA3560 -123 10.6 ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT
Klebsiella pneumoniae subsp. pneumoniae MGH 78578 KPN_02390 -157 10.3 CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT
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