Propagation of RhaS regulog to Cronobacter turicensis z3032
| Source regulog: | RhaS - Enterobacteriales |
| Regulator type: | Transcription factor |
| Regulator family: | AraC |
| Regulation mode: | activator |
| Biological process: | Rhamnose utilization |
| Effector: | Rhamnose |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Cronobacter turicensis z3032 |
| Orthologous TF(s) | Ctu_01580 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -139
Score: 8.5 Sequence: ACCCCCTGTTTTTTGCCA-(15)-CGGCAGCGCCCCGAAGGT
Locus tag: Ctu_01600
|
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| Ctu_01600 | -139 | 8.5 | ACCCCCTGTTTTTTGCCA-(15)-CGGCAGCGCCCCGAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaT | ||||
| Ortholog function: L-rhamnose:proton symporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_03094 | -126 | 8.5 | ATAACGTGCTGGTTGCCA-(15)-CGGCAATCCTCAAAAGGT |
| Enterobacter sp. 638 | Ent638_4064 | -127 | 8.3 | TTAACGCGTTGATTGCCA-(15)-CGGCAACCTTCTGAAGGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA0450 | -171 | 8.4 | ACCTTCAAACCGATGCCG-(15)-TGGCACGCATCTGAAGGT |
| Escherichia coli str. K-12 substr. MG1655 | b3907 | -123 | 9.3 | TTAATGCCGTGATTGCCA-(15)-CGGCAACAGGCGAAAGGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_04216 | -127 | 8.6 | TTAAGCCCATGGTTGCCA-(15)-TGGCAACGTCCTGAAGGC |
| Salmonella typhimurium LT2 | STM4050 | -271 | 9.7 | TTCTTTGCATTGTTGCCA-(14)-TGTCGTTATGATGAAGGT |
| -127 | 7.8 | TTAACGTGCTGATTGCCA-(15)-CGGCAATCGTTATAAGGT | ||
| Yersinia pestis KIM | y0593 | -149 | 9.3 | ACCTACTGAATTTTGCCA-(15)-AGGCAGTCAGCCGAAGGT |
|
Position: -32
Score: 10.6 Sequence: CTCTTTGTATTTTTGCCA-(15)-TGGCAGAAAAGGAAAGGT
Locus tag: Ctu_25690
|
||||
| Ctu_25690 | -32 | 10.6 | CTCTTTGTATTTTTGCCA-(15)-TGGCAGAAAAGGAAAGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhiT | ||||
| Ortholog function: Rhamnogalacturonide transporter | ||||
| Citrobacter koseri ATCC BAA-895 | CKO_01081 | -147 | 11 | CTCTTTGTATTTTTGCCA-(15)-TGGCAAAAATGAAAAGGT |
| Enterobacter sp. 638 | Ent638_2444 | -146 | 11.1 | CTCTTTGCATTATTGCCA-(15)-TGGCAGAAACAGAAAGGT |
| Erwinia carotovora subsp. atroseptica SCRI1043 | ECA3560 | -123 | 10.6 | ATCTTCCCTGTGCTGCCA-(15)-TGGCAAAAGCGCAAAGGT |
| Klebsiella pneumoniae subsp. pneumoniae MGH 78578 | KPN_02390 | -157 | 10.3 | CTCTTTGTCATTTTGCCA-(15)-TGGCAAAAGTACAAAGGT |