Propagation of PaaR regulog to Ralstonia pickettii 12D
| Source regulog: | PaaR - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Phenylacetic acid degradation |
| Effector: | Phenylacetyl-CoA |
| Phylum: | Betaproteobacteria |
| Propagated regulon: | |
| Target genome | Ralstonia pickettii 12D |
| Orthologous TF(s) | Rpic12D_3490 |
| Regulated genes | 3 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -53
Score: 6.5 Sequence: ATTAACCGACCGGTTGGTCGGC
Locus tag: Rpic12D_2749
|
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| Rpic12D_2749 | -53 | 6.5 | ATTAACCGACCGGTTGGTCGGC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaF2 | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Ralstonia metallidurans CH34 | Rmet_3162 | -149 | 6.1 | ATTAACCGACCAGTCGGTCGGC |
| Ralstonia pickettii 12J | Rpic_3114 | -53 | 6.5 | ATTAACCGACCGGTTGGTCGGC |
| Ralstonia solanacearum GMI1000 | RSc2872 | -53 | 6.5 | ATTAACCGACCGGTTGGTCGGC |
|
Position: -52
Score: 6.2 Sequence: GCCGACCAACCGGTCGGTTAAT
Locus tag: Rpic12D_2750
|
||||
| Rpic12D_2750 | -52 | 6.2 | GCCGACCAACCGGTCGGTTAAT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaF | ||||
| Ortholog function: Enoyl-CoA hydratase (EC 4.2.1.17) | ||||
| Cupriavidus taiwanensis | RALTA_A2763 | -89 | 5.7 | GCCGACCGACTGGTCGGTTTAT |
| Ralstonia eutropha H16 | H16_A3311 | -90 | 5.7 | GCCGACCGACTGGTCGGTTTAT |
| Ralstonia eutropha JMP134 | Reut_A3015 | -61 | 6.2 | ACCGACCGATCGGTCGGTTAAT |
| Ralstonia metallidurans CH34 | Rmet_3163 | -100 | 5.8 | GCCGACCGACTGGTCGGTTAAT |
| Ralstonia pickettii 12J | Rpic_3115 | -52 | 6.2 | GCCGACCAACCGGTCGGTTAAT |
| Ralstonia solanacearum GMI1000 | RSc2873 | -48 | 6.2 | GCCGACCAACCGGTCGGTTAAT |
|
Position: -96
Score: 6.3 Sequence: ATTGACCGACCGGTCGGACGGT
Locus tag: Rpic12D_3495
|
||||
| Rpic12D_3495 | -96 | 6.3 | ATTGACCGACCGGTCGGACGGT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: paaA | ||||
| Ortholog function: Phenylacetate-CoA oxygenase, PaaA subunit | ||||
| Cupriavidus taiwanensis | RALTA_A2973 | -83 | 6.2 | ATTGACCGACCGGTCGGCTTAT |
| Ralstonia eutropha H16 | H16_A3520 | -79 | 5.7 | ATTGACCGACCGGTCGGCATAT |
| Ralstonia eutropha JMP134 | Reut_A3206 | -95 | 6.2 | ATTGACCGACCGGTCGGCTTAT |
| Ralstonia metallidurans CH34 | Rmet_3369 | -113 | 6.8 | ATTGACCGACCGGTCGGTTTAT |
| Ralstonia pickettii 12J | Rpic_4567 | -96 | 6.3 | ATTGACCGACCGGTCGGACGGT |
| Ralstonia solanacearum GMI1000 | RSp0604 | -97 | 6.3 | ATTGACCGACCGGTCGGACGAT |