Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of YfmP regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: YfmP - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Metal efflux
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_6009
Regulated genes 2
Built upon 7 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -107
Score: 6.5
Sequence: AAGTTAACGTTGACGTAAAGAT
Locus tag: Pjdr2_1878
Pjdr2_1878 -107 6.5 AAGTTAACGTTGACGTAAAGAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfmO
Ortholog function: Metal efflux transporter, MFS_1 family
Bacillus subtilis subsp. subtilis str. 168 BSU07400 -68 7 AACTTAACGTTTACGTTAAGGT
Bacillus amyloliquefaciens FZB42 RBAM_007650 -69 6.9 AAGTTTACGTTTACGTTAAGGT
Bacillus pumilus SAFR-032 BPUM_0693 -71 6.6 ACATTTACGTTTACGTTAAGGT
Bacillus licheniformis DSM 13 BLi00774 -65 6.8 AACTTAACGTTTACGTAAAAGT
Bacillus cereus ATCC 14579 BC5372 -50 6.5 AAGTTAACGTTAACGTAAAATG
Paenibacillus sp. JDR-2 Pjdr2_1878 -107 6.5 AAGTTAACGTTGACGTAAAGAT
Paenibacillus sp. JDR-2 Pjdr2_6008 -69 6.5 AAGTTAACGTTGACGTTAACAT
Position: -69
Score: 6.5
Sequence: AAGTTAACGTTGACGTTAACAT
Locus tag: Pjdr2_6009
Pjdr2_6009 -69 6.5 AAGTTAACGTTGACGTTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfmP
Ortholog function: Transcriptional regulator of metal efflux transporter expression, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU07390 -68 7 AACTTAACGTTTACGTTAAGGT
Bacillus amyloliquefaciens FZB42 RBAM_007640 -69 6.9 AAGTTTACGTTTACGTTAAGGT
Bacillus pumilus SAFR-032 BPUM_0692 -71 6.6 ACATTTACGTTTACGTTAAGGT
Bacillus licheniformis DSM 13 BLi00773 -65 6.8 AACTTAACGTTTACGTAAAAGT
Bacillus cereus ATCC 14579 BC5373 -50 6.5 AAGTTAACGTTAACGTAAAATG
Paenibacillus sp. JDR-2 Pjdr2_6009 -69 6.5 AAGTTAACGTTGACGTTAACAT
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