Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of CsoR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: CsoR - Bacillales
Regulator type: Transcription factor
Regulator family: CsoR
Regulation mode: repressor
Biological process: Copper resistance
Effector: Copper ion, (Cu+)
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_5324
Regulated genes 2
Built upon 25 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -69
Score: 5.5
Sequence: ATACCCATGGGGGGTAT
Locus tag: Pjdr2_3010
Pjdr2_3010 -69 5.5 ATACCCATGGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_3010
Ortholog function: Two component transcriptional regulator, winged helix family
Paenibacillus sp. JDR-2 Pjdr2_3010 -69 5.5 ATACCCATGGGGGGTAT
Position: -59
Score: 5.9
Sequence: ATACCCCTAGGGGGTAT
Locus tag: Pjdr2_5324
Pjdr2_5324 -59 5.9 ATACCCCTAGGGGGTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: csoR
Ortholog function: Transcriptional repressor of copper utilisation, RcnR family
Paenibacillus sp. JDR-2 Pjdr2_5324 -59 5.9 ATACCCCTAGGGGGTAT
-23 5.6 ATACCCCCTGGAGGTAT
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