Regulog CsoR - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | CsoR |
| Regulation mode: | repressor |
| Biological process: | Copper resistance |
| Effector: | Copper ion, (Cu+) |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By trascription factor - CsoR
- By TF family - CsoR
- By effector - Copper ion, (Cu+)
- By pathway - Copper resistance
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 3 |
| Bacillus amyloliquefaciens FZB42 | 2 | 2 |
| Bacillus pumilus SAFR-032 | 2 | 2 |
| Bacillus licheniformis DSM 13 | 2 | 2 |
| Anoxybacillus flavithermus WK1 | 3 | 1 |
| Geobacillus kaustophilus HTA426 | 3 | 1 |
| Bacillus cereus ATCC 14579 | 2 | 2 |
| Bacillus halodurans C-125 | 2 | 2 |
| Bacillus clausii KSM-K16 | 3 | 3 |
| Oceanobacillus iheyensis HTE831 | 4 | 2 |
| Paenibacillus sp. JDR-2 | 7 | 3 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| csoR |
Gene: BSU33520: Transcriptional repressor of copper utilisation, RcnR family |
Gene: RBAM_030700: Transcriptional repressor of copper utilisation, RcnR family |
Gene: BPUM_3023: Transcriptional repressor of copper utilisation, RcnR family |
Gene: BLi03555: Transcriptional repressor of copper utilisation, RcnR family |
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Anoxybacillus flavithermus WK1 Site: position = -42 score = 4.32281 sequence = ATACCCATTACCGGTAT Gene: Aflv_1217: Transcriptional repressor of copper utilisation, RcnR family |
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Geobacillus kaustophilus HTA426 Site: position = -43 score = 4.32281 sequence = ATACCCATTACCGGTAT Gene: GK0901: Transcriptional repressor of copper utilisation, RcnR family |
Gene: BC3732: Transcriptional repressor of copper utilisation, RcnR family |
Gene: BH0558: Transcriptional repressor of copper utilisation, RcnR family |
Gene: ABC2444: Transcriptional repressor of copper utilisation, RcnR family |
*
Oceanobacillus iheyensis HTE831 Site: position = -194 score = 4.60647 sequence = ATACCCCAACGAAGTAT Site: position = -49 score = 5.2131 sequence = ATACATTAGGGGGGTAT Gene: OB1141: Transcriptional repressor of copper utilisation, RcnR family |
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Paenibacillus sp. JDR-2 Site: position = -59 score = 5.86074 sequence = ATACCCCTAGGGGGTAT Site: position = -23 score = 5.55422 sequence = ATACCCCCTGGAGGTAT Gene: Pjdr2_5324: Transcriptional repressor of copper utilisation, RcnR family |
Transcriptional repressor of copper utilisation, RcnR family |
| copA |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -34 score = 5.51705 sequence = ATACCCCCCAGGTGTAT Gene: BSU33500: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Bacillus amyloliquefaciens FZB42 Site: position = -27 score = 5.39408 sequence = ATACCCCCTGGGGGTTT Gene: RBAM_030680: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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Bacillus pumilus SAFR-032 Site: position = -34 score = 5.57323 sequence = ATACCCCCATGGTGTAT Gene: BPUM_3021: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Bacillus licheniformis DSM 13 Site: position = -33 score = 5.17188 sequence = ATACCTACAAGGGGTAT Gene: BLi03553: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: Aflv_1218: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: GK0902: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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Bacillus cereus ATCC 14579 Site: position = -32 score = 5.55679 sequence = ATACCTCATAAGGGTAT Gene: BC3730: Copper-translocating P-type ATPase (EC 3.6.3.4) |
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Bacillus halodurans C-125 Site: position = -31 score = 5.25769 sequence = ATACCTAATAGGGGTAT Gene: BH0557: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Bacillus clausii KSM-K16 Site: position = -64 score = 5.86331 sequence = ATACCCCTATAGGGTAT Gene: ABC3231: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Gene: OB1142: Copper-translocating P-type ATPase (EC 3.6.3.4) |
*
Paenibacillus sp. JDR-2 Site: position = -85 score = 5.17188 sequence = ATACCCCCAGTAGGTAT Gene: Pjdr2_2774: Copper-translocating P-type ATPase (EC 3.6.3.4) |
Copper-translocating P-type ATPase (EC 3.6.3.4) |
| copZ |
*
Bacillus subtilis subsp. subtilis str. 168 Site: position = -57 score = 5.89293 sequence = ATACCCTACGGGGGTAT Gene: BSU33510: Copper insertion chaperone and transporter component |
*
Bacillus amyloliquefaciens FZB42 Site: position = -44 score = 5.89293 sequence = ATACCCTACAGGGGTAT Gene: RBAM_030690: Copper insertion chaperone and transporter component |
*
Bacillus pumilus SAFR-032 Site: position = -55 score = 5.8955 sequence = ATACCCTACTAGGGTAT Gene: BPUM_3022: Copper insertion chaperone and transporter component |
*
Bacillus licheniformis DSM 13 Site: position = -65 score = 5.89293 sequence = ATACCCTACAGGGGTAT Gene: BLi03554: Copper insertion chaperone and transporter component |
Gene: Aflv_1219: Copper insertion chaperone and transporter component |
Gene: GK0903: Copper insertion chaperone and transporter component |
*
Bacillus cereus ATCC 14579 Site: position = -71 score = 5.11976 sequence = TTACCTTAGGGGGGTAT Gene: BC3731: Copper insertion chaperone and transporter component |
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Bacillus halodurans C-125 Site: position = -54 score = 4.90852 sequence = ATACAATAGGGGGGTAT Gene: BH0556: Copper insertion chaperone and transporter component |
*
Bacillus clausii KSM-K16 Site: position = -57 score = 5.12515 sequence = ATACCTGACGGGGGTAT Gene: ABC2443: Copper insertion chaperone and transporter component |
Gene: OB1143: Copper insertion chaperone and transporter component |
Gene: Pjdr2_5323: Copper insertion chaperone and transporter component |
Copper insertion chaperone and transporter component |
| CRON 2. | ||||||||||||
| Pjdr2_3010 |
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Gene: GK1690: Two component transcriptional regulator, winged helix family |
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Paenibacillus sp. JDR-2 Site: position = -69 score = 5.50803 sequence = ATACCCATGGGGGGTAT Gene: Pjdr2_3010: Two component transcriptional regulator, winged helix family |
Two component transcriptional regulator, winged helix family |
| Pjdr2_3011 |
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Gene: GK1689: Two-component sensor histidine kinase |
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Gene: Pjdr2_3011: Two-component sensor histidine kinase |
Two-component sensor histidine kinase |
| ydhK |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -43 score = 5.19603 sequence = ATACCGTTCGGGGGTAT Gene: BSU05790: Hypothetical protein |
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Gene: GK1692: Hypothetical protein |
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Bacillus clausii KSM-K16 Site: position = -51 score = 5.97874 sequence = ATACCCCACTAGGGTAT Gene: ABC3339: Hypothetical protein |
*
Oceanobacillus iheyensis HTE831 Site: position = -128 score = 5.2131 sequence = ATACCCCCCTAATGTAT Gene: OB1140: Hypothetical protein |
Gene: Pjdr2_3012: Hypothetical protein |
Hypothetical protein |
| yoxB |
Gene: BSU18520: Hypothetical protein |
Gene: RBAM_018730: Hypothetical protein |
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Gene: Pjdr2_3013: Hypothetical protein |
Hypothetical protein |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |