Propagation of HrcA regulog to Ralstonia solanacearum UW551
| Source regulog: | HrcA - Ralstonia |
| Regulator type: | Transcription factor |
| Regulator family: | HrcA |
| Regulation mode: | repressor |
| Biological process: | Heat shock response |
| Effector: | Heat shock |
| Phylum: | Proteobacteria/beta |
| Propagated regulon: | |
| Target genome | Ralstonia solanacearum UW551 |
| Orthologous TF(s) | RRSL_03203 |
| Regulated genes | 2 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -70
Score: 7.4 Sequence: TTAGCACTCATCCAGCCGGAGTGCTAA
Locus tag: RRSL_03287
|
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| RRSL_03287 | -70 | 7.4 | TTAGCACTCATCCAGCCGGAGTGCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rpoH | ||||
| Ortholog function: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32) | ||||
| Ralstonia solanacearum GMI1000 | RSc0374 | -70 | 7.4 | TTAGCACTCATCCAGCCGGAGTGCTAA |
| Ralstonia pickettii 12J | Rpic_0230 | -70 | 7.6 | TTAGCACTCATCCGGTTGGAGTGCTAA |
| Ralstonia metallidurans CH34 | Rmet_0272 | -96 | 7.7 | TTAGCACTCGTCCGGTTCGAGTGCTAA |
| Ralstonia eutropha JMP134 | Reut_A0325 | -104 | 7.9 | TTAGCACTCACCCGGCTTGAGTGCTAA |
| Ralstonia eutropha H16 | H16_A0354 | -104 | 7.9 | TTAGCACTCACCCGGCCTGAGTGCTAA |
| Cupriavidus taiwanensis | RALTA_A0299 | -108 | 7.7 | TTAGCACTCACCCGGCCAGAGTGCTAA |
|
Position: -116
Score: 7.7 Sequence: TTAGCACTCGCCTGGGAGGAGTGCTAA
Locus tag: RRSL_02052
|
||||
| RRSL_02052 | -116 | 7.7 | TTAGCACTCGCCTGGGAGGAGTGCTAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: groS | ||||
| Ortholog function: Heat shock protein 60 family co-chaperone GroES | ||||
| Ralstonia solanacearum GMI1000 | RSc0641 | -117 | 7.2 | TTGGCACTCGCCTGGAGGGAGTGCTAA |
| Ralstonia pickettii 12J | Rpic_0578 | -118 | 7.6 | TTAGCACTCGCCGGGCAGGAGTGCTAA |
| Ralstonia metallidurans CH34 | Rmet_0615 | -118 | 7.6 | TTAGCACTCGCTGGGGGAGAGTGCTAA |
| Ralstonia eutropha JMP134 | Reut_A2657 | -130 | 7.8 | TTAGCACTCGCTGGGGGTGAGTGCTAA |
| Ralstonia eutropha H16 | H16_A0705 | -121 | 7.8 | TTAGCACTCGTCAGGGGTGAGTGCTAA |
| Cupriavidus taiwanensis | RALTA_A0685 | -121 | 7.7 | TTAGCACTCGTCAGGGGGGAGTGCTAA |