Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing rpoH gene

Properties
Regulog: HrcA - Ralstonia
Regulator type: Transcription factor
Regulator family: HrcA
Regulation mode: repressor
Biological process: Heat shock response
Effector: Heat shock
Phylum: Proteobacteria/beta
Built upon 12 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Cupriavidus taiwanensis
Position: -108
Score: 7.70278
Sequence: TTAGCACTCACCCGGCCAGAGTGCTAA
Locus tag: RALTA_A0299
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -108 7.7 TTAGCACTCACCCGGCCAGAGTGCTAA RALTA_A0299
Ralstonia eutropha H16
Position: -104
Score: 7.89102
Sequence: TTAGCACTCACCCGGCCTGAGTGCTAA
Locus tag: H16_A0354
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -104 7.9 TTAGCACTCACCCGGCCTGAGTGCTAA H16_A0354
Ralstonia eutropha JMP134
Position: -104
Score: 7.89102
Sequence: TTAGCACTCACCCGGCTTGAGTGCTAA
Locus tag: Reut_A0325
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -104 7.9 TTAGCACTCACCCGGCTTGAGTGCTAA Reut_A0325
Ralstonia metallidurans CH34
Position: -96
Score: 7.65464
Sequence: TTAGCACTCGTCCGGTTCGAGTGCTAA
Locus tag: Rmet_0272
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -96 7.7 TTAGCACTCGTCCGGTTCGAGTGCTAA Rmet_0272
Ralstonia pickettii 12J
Position: -70
Score: 7.60832
Sequence: TTAGCACTCATCCGGTTGGAGTGCTAA
Locus tag: Rpic_0230
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -70 7.6 TTAGCACTCATCCGGTTGGAGTGCTAA Rpic_0230
Ralstonia solanacearum GMI1000
Position: -70
Score: 7.43468
Sequence: TTAGCACTCATCCAGCCGGAGTGCTAA
Locus tag: RSc0374
Name: rpoH
Funciton: Heat shock response RNA polymerase sigma factor RpoH (Sigma 32)
rpoH -70 7.4 TTAGCACTCATCCAGCCGGAGTGCTAA RSc0374