Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GltR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: GltR - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: unknown
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_3123
Regulated genes 3
Built upon 5 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -111
Score: 5.3
Sequence: GCTATCTCTTTTCGGGATAGC
Locus tag: Pjdr2_3122
Pjdr2_3122 -111 5.3 GCTATCTCTTTTCGGGATAGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: yrpB
Ortholog function: Probable nitronate monooxygenase (EC 1.13.12.16)
Bacillus subtilis subsp. subtilis str. 168 BSU26800 -241 5.8 GACATCTCAAAATCAGATATC
Paenibacillus sp. JDR-2 Pjdr2_3122 -111 5.3 GCTATCTCTTTTCGGGATAGC
Position: -50
Score: 5.4
Sequence: GATATCATTTTTTCAGATATT
Locus tag: Pjdr2_3123
Pjdr2_3123 -50 5.4 GATATCATTTTTTCAGATATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: gltR
Ortholog function: Transcriptional regulator, LysR family
Bacillus subtilis subsp. subtilis str. 168 BSU26670 -37 5.8 GACATCTCAAAATCAGATATC
Paenibacillus sp. JDR-2 Pjdr2_3123 -50 5.4 GATATCATTTTTTCAGATATT
Position: -101
Score: 5.4
Sequence: AATATCTGAAAAAATGATATC
Locus tag: Pjdr2_3124
Pjdr2_3124 -101 5.4 AATATCTGAAAAAATGATATC
Supported by regulated orthologs from reference regulons
Ortholog gene name: Pjdr2_3124
Ortholog function: Major facilitator (MFS) superfamily protein
Paenibacillus sp. JDR-2 Pjdr2_3124 -101 5.4 AATATCTGAAAAAATGATATC
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