Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of GlnR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: GlnR - Bacillales
Regulator type: Transcription factor
Regulator family: MerR
Regulation mode: repressor
Biological process: Nitrogen assimilation
Effector: Feedback-inhibited GlnA, glutamine synthetase
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_5154, Pjdr2_2618
Regulated genes 2
Built upon 45 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -85
Score: 5.4
Sequence: ATGTCATATTACCTAACAT
Locus tag: Pjdr2_4328
Pjdr2_4328 -85 5.4 ATGTCATATTACCTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ureA
Ortholog function: Urease gamma subunit (EC 3.5.1.5)
Geobacillus kaustophilus HTA426 GK1932 -225 4.3 GTGATAATAAATATAACAA
-202 5.1 ATGTAATAAAATGTGACAA
Paenibacillus sp. JDR-2 Pjdr2_4328 -85 5.4 ATGTCATATTACCTAACAT
Position: -303
Score: 5.5
Sequence: TTGTTAGATAATCTAACAT
Position: -42
Score: 4.8
Sequence: GTGTTAGAAAACATTACAT
Locus tag: Pjdr2_5154
Pjdr2_5154 -303 5.5 TTGTTAGATAATCTAACAT
-42 4.8 GTGTTAGAAAACATTACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tnrA
Ortholog function: Transcriptional regulator of nitrogen assimilation, MerR family
Bacillus subtilis subsp. subtilis str. 168 BSU13310 -82 5.4 ATGTTAGAAAATATGACAA
Bacillus pumilus SAFR-032 BPUM_1230 -122 4.3 TTGTCAACTTTCCTTCCAT
-81 4.9 GTGTTATATTTTCTAACAA
Bacillus licheniformis DSM 13 BLi01490 -82 4.9 ATGTTAGATTTTCTGACAG
Anoxybacillus flavithermus WK1 Aflv_1544 -114 5.2 TTGTTACTTTTTATAACAT
-83 5.1 TTGTTACTTTTTATAACAA
-28 5.5 ATGTTATAAAATATGACAT
Geobacillus kaustophilus HTA426 GK1860 -87 4.8 ATGTTAATTTTATTTACAA
-34 4.7 ACGTTAGAAAATATAACGT
Bacillus halodurans C-125 BH1494 -111 5.4 TTGTAAGAAAATCTAACAT
Bacillus clausii KSM-K16 ABC1760 -100 5.4 TTGTTAGATTTTCTTACAT
Oceanobacillus iheyensis HTE831 OB1650 -81 5.5 ATGTTAGAAATACTAACAT
Paenibacillus sp. JDR-2 Pjdr2_5154 -303 5.5 TTGTTAGATAATCTAACAT
-42 4.8 GTGTTAGAAAACATTACAT