Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of NrdR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: NrdR - Bacillales
Regulator type: Transcription factor
Regulator family: NrdR
Regulation mode: repressor
Biological process: Deoxyribonucleotide biosynthesis
Effector: Deoxyribonucleotides
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_1529
Regulated genes 2
Built upon 27 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -78
Score: 5.1
Sequence: ACACAATATATGGTGC
Locus tag: Pjdr2_3990
Pjdr2_3990 -78 5.1 ACACAATATATGGTGC
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdZ
Ortholog function: Ribonucleotide reductase of class II (coenzyme B12-dependent) (EC 1.17.4.1)
Geobacillus kaustophilus HTA426 GK2419 -135 5.5 TAACAATATATAGTAT
-102 5.8 ATACTATATATTGTTT
Bacillus halodurans C-125 BH2810 -178 5.5 AATCAATATATAGTAT
-145 5.7 ATACTATATATTGAAT
Paenibacillus sp. JDR-2 Pjdr2_3990 -110 3.8 TACCGATATGTAGTAT
-78 5.1 ACACAATATATGGTGC
Position: -139
Score: 4.6
Sequence: CAACTACATATTGAGT
Locus tag: Pjdr2_4012
Pjdr2_4012 -139 4.6 CAACTACATATTGAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: nrdI
Ortholog function: Ribonucleotide reduction protein NrdI
Bacillus cereus ATCC 14579 BC1353 -65 5.4 ATACAATATATAGAGA
-44 4.2 GAACAACATATAGAGA
Paenibacillus sp. JDR-2 Pjdr2_4012 -139 4.6 CAACTACATATTGAGT