Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YwbI regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: YwbI - Bacillales
Regulator type: Transcription factor
Regulator family: LysR
Regulation mode:
Biological process: Cell wall metabolism
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_1917
Regulated genes 1
Built upon 8 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -60
Score: 5.6
Sequence: AAATGTATTTTACCTAT
Locus tag: Pjdr2_1918
Pjdr2_1918 -60 5.6 AAATGTATTTTACCTAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: cidA
Ortholog function: Holin-like protein CidA
Bacillus subtilis subsp. subtilis str. 168 BSU38320 -60 5.7 ATATATATTTTACCTAT
Bacillus amyloliquefaciens FZB42 RBAM_035580 -60 6 ATATGTATTTTACCTAT
Bacillus pumilus SAFR-032 BPUM_3486 -120 6 ATATGTATTTTACCTAT
Bacillus licheniformis DSM 13 BLi04057 -62 6 ATATGTATTTTACCTAT
Paenibacillus sp. JDR-2 Pjdr2_1918 -60 5.6 AAATGTATTTTACCTAT
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