Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of BirA regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: BirA - Bacillales
Regulator type: Transcription factor
Regulator family: BirA
Regulation mode: repressor
Biological process: Biotin biosynthesis
Effector: Biotin
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_2444
Regulated genes 2
Built upon 36 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -39
Score: 8.8
Sequence: TTGTTAAC-(18)-GTTAACAA
Locus tag: Pjdr2_1461
Pjdr2_1461 -39 8.8 TTGTTAAC-(18)-GTTAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioA
Ortholog function: Adenosylmethionine-8-amino-7-oxononanoate aminotransferase (EC 2.6.1.62)
Bacillus subtilis subsp. subtilis str. 168 BSU30230 -85 8.8 TTGTTAAC-(15)-GTTAACAA
Bacillus amyloliquefaciens FZB42 RBAM_018280 -126 7.2 CAGTTAAC-(15)-GTTGACAT
-64 8.2 GTGTTAAC-(15)-GTTAACAT
Bacillus licheniformis DSM 13 BLi00767 -55 8.7 ATGTTAAC-(15)-GTTAACAT
Anoxybacillus flavithermus WK1 Aflv_1071 -52 8.7 TTGTTAAC-(15)-GTTGACAA
Geobacillus kaustophilus HTA426 GK3016 -84 8.5 ATGTAAAC-(15)-GTTGACAA
Bacillus cereus ATCC 14579 BC4119 -45 8.7 ATGTTAAC-(15)-GTTAACAT
Bacillus halodurans C-125 BH0782 -42 8.7 ATGTTAAC-(15)-GTTAACAT
Paenibacillus sp. JDR-2 Pjdr2_1461 40 8.8 TTGTTAAC-(18)-GTTAACAA
Position: -67
Score: 8.8
Sequence: TTGTTAAC-(18)-GTTAACAT
Locus tag: Pjdr2_3366
Pjdr2_3366 -67 8.8 TTGTTAAC-(18)-GTTAACAT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bioY2
Ortholog function: Substrate-specific component BioY of biotin ECF transporter
Bacillus subtilis subsp. subtilis str. 168 BSU10370 -88 8.5 ATGTAAAC-(15)-GTTGACAT
Bacillus amyloliquefaciens FZB42 RBAM_010550 -87 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus pumilus SAFR-032 BPUM_2376 -88 8.6 ATGTTAAC-(15)-GTTGACAT
Bacillus cereus ATCC 14579 BC3629 -111 8.6 TTGTAAAC-(15)-GTTGACAA
-46 7.7 ATGTTACC-(15)-GTTTACAA
Bacillus clausii KSM-K16 ABC2607 -82 8.7 TTGTTAAC-(15)-GTTGACAA
Paenibacillus sp. JDR-2 Pjdr2_3366 -158 8.8 TTGTTAAC-(18)-GTTAACAt