Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YtcD regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: YtcD - Bacillales
Regulator type: Transcription factor
Regulator family: HxlR
Regulation mode: activator
Biological process:
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_0323
Regulated genes 2
Built upon 10 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -92
Score: 5.1
Sequence: AATAGTGCGTACTAGT
Locus tag: Pjdr2_0322
Pjdr2_0322 -92 5.1 AATAGTGCGTACTAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytbD
Ortholog function: Putative transporter, MFS family
Bacillus subtilis subsp. subtilis str. 168 BSU29040 -138 6 CAAAGTACGTACTTTT
Bacillus amyloliquefaciens FZB42 RBAM_026080 -135 6.1 AAAAGTACGTTCTTTT
Bacillus licheniformis DSM 13 BLi02839 -24 6.1 AAAAGTGCGTACTTTT
Paenibacillus sp. JDR-2 Pjdr2_0322 -92 5.1 AATAGTGCGTACTAGT
Position: -82
Score: 5.1
Sequence: ACTAGTACGCACTATT
Locus tag: Pjdr2_0323
Pjdr2_0323 -82 5.1 ACTAGTACGCACTATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: ytcD
Ortholog function: Transcriptional regulator, HxlR family
Bacillus subtilis subsp. subtilis str. 168 BSU29030 -61 6 AAAAGTACGTACTTTG
Bacillus amyloliquefaciens FZB42 RBAM_026070 -64 6.1 AAAAGAACGTACTTTT
Bacillus pumilus SAFR-032 BPUM_2662 -37 6.3 AAAAGTACGTACTTTT
Bacillus licheniformis DSM 13 BLi02840 -79 6.1 AAAAGTACGCACTTTT
Paenibacillus sp. JDR-2 Pjdr2_0323 -82 5.1 ACTAGTACGCACTATT
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