Regulog YtcD - Bacillales
| Regulator type: | Transcription factor |
| Regulator family: | HxlR |
| Regulation mode: | activator |
| Biological process: | |
| Effector: | |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bacillales
- By TF family - HxlR
| Genome | Genes | Operons |
|---|---|---|
| Bacillus subtilis subsp. subtilis str. 168 | 3 | 2 |
| Bacillus amyloliquefaciens FZB42 | 3 | 2 |
| Bacillus pumilus SAFR-032 | 3 | 2 |
| Bacillus licheniformis DSM 13 | 4 | 2 |
| Anoxybacillus flavithermus WK1 | ||
| Geobacillus kaustophilus HTA426 | ||
| Bacillus cereus ATCC 14579 | ||
| Bacillus halodurans C-125 | ||
| Bacillus clausii KSM-K16 | ||
| Oceanobacillus iheyensis HTE831 | ||
| Paenibacillus sp. JDR-2 | 3 | 2 |
| Genes | Function | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||||||
| ytbD |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -138 score = 5.98322 sequence = CAAAGTACGTACTTTT Gene: BSU29040: Putative transporter, MFS family |
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Bacillus amyloliquefaciens FZB42 Site: position = -135 score = 6.0638 sequence = AAAAGTACGTTCTTTT Gene: RBAM_026080: Putative transporter, MFS family |
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Bacillus pumilus SAFR-032 Site: position = -101 score = 6.34764 sequence = AAAAGTACGTACTTTT Gene: BPUM_2663: Putative transporter, MFS family |
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Bacillus licheniformis DSM 13 Site: position = -24 score = 6.0638 sequence = AAAAGTGCGTACTTTT Gene: BLi02839: Putative transporter, MFS family |
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Paenibacillus sp. JDR-2 Site: position = -92 score = 5.11188 sequence = AATAGTGCGTACTAGT Gene: Pjdr2_0322: Putative transporter, MFS family |
Putative transporter, MFS family |
| ytbE |
Gene: BSU29050: Putative aldo/keto reductase |
Gene: RBAM_026090: Putative aldo/keto reductase |
Gene: BPUM_2664: Putative aldo/keto reductase |
Gene: BLi02838: Putative aldo/keto reductase |
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Gene: Pjdr2_0321: Putative aldo/keto reductase |
Putative aldo/keto reductase |
| CRON 2. | ||||||||||||
| ytcD |
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Bacillus subtilis subsp. subtilis str. 168 Site: position = -61 score = 5.98322 sequence = AAAAGTACGTACTTTG Gene: BSU29030: Transcriptional regulator, HxlR family |
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Bacillus amyloliquefaciens FZB42 Site: position = -64 score = 6.0638 sequence = AAAAGAACGTACTTTT Gene: RBAM_026070: Transcriptional regulator, HxlR family |
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Bacillus pumilus SAFR-032 Site: position = -37 score = 6.34764 sequence = AAAAGTACGTACTTTT Gene: BPUM_2662: Transcriptional regulator, HxlR family |
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Bacillus licheniformis DSM 13 Site: position = -79 score = 6.0638 sequence = AAAAGTACGCACTTTT Gene: BLi02840: Transcriptional regulator, HxlR family |
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Paenibacillus sp. JDR-2 Site: position = -82 score = 5.11188 sequence = ACTAGTACGCACTATT Gene: Pjdr2_0323: Transcriptional regulator, HxlR family |
Transcriptional regulator, HxlR family |
| BLi02841 |
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Gene: BPUM_2644: Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) |
Gene: BLi02841: Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) |
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Alpha-aspartyl dipeptidase Peptidase E (EC 3.4.13.21) |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |