Propagation of Rex regulog to Paenibacillus sp. JDR-2
| Source regulog: | Rex - Bacillales |
| Regulator type: | Transcription factor |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Phylum: | Firmicutes |
| Propagated regulon: | |
| Target genome | Paenibacillus sp. JDR-2 |
| Orthologous TF(s) | Pjdr2_2450 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -84
Score: 6 Sequence: TTTGTGCATCAATTCACAAA
Locus tag: Pjdr2_0068
|
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| Pjdr2_0068 | -84 | 6 | TTTGTGCATCAATTCACAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: nadA | ||||
| Ortholog function: Quinolinate synthetase (EC 4.1.99.-) | ||||
| Paenibacillus sp. JDR-2 | Pjdr2_0068 | -84 | 6 | TTTGTGCATCAATTCACAAA |
|
Position: -207
Score: 5.8 Sequence: ATTGTGAATTAATTCACACA
Locus tag: Pjdr2_2160
|
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| Pjdr2_2160 | -207 | 5.8 | ATTGTGAATTAATTCACACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: noxE | ||||
| Ortholog function: NADH oxidase (EC 1.6.99.3) | ||||
| Paenibacillus sp. JDR-2 | Pjdr2_2160 | -273 | 4.8 | TATGTGAAATTAATCACAAC |
| -207 | 5.8 | ATTGTGAATTAATTCACACA | ||
| -42 | 4.8 | TATGTGAATAATTTCACAGG | ||
|
Position: -64
Score: 5.7 Sequence: ATTGTGTAATTTTTCACAAA
Locus tag: Pjdr2_4834
|
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| Pjdr2_4834 | -64 | 5.7 | ATTGTGTAATTTTTCACAAA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ndh2 | ||||
| Ortholog function: NADH dehydrogenase (EC 1.6.99.3) | ||||
| Bacillus licheniformis DSM 13 | BLi03392 | -119 | 4.9 | AAAGTGAAGGGTTTCACAAA |
| Anoxybacillus flavithermus WK1 | Aflv_2402 | -76 | 5.5 | TTCGTGAATAAATTCACAAA |
| Geobacillus kaustophilus HTA426 | GK2953 | -102 | 5.6 | AACGTGAATTATTTCACAAA |
| Bacillus clausii KSM-K16 | ABC2924 | -55 | 4.8 | AAAGTGAAATGAATCACAAA |
| Paenibacillus sp. JDR-2 | Pjdr2_4834 | -64 | 5.7 | ATTGTGTAATTTTTCACAAA |
|
Position: -97
Score: 5.4 Sequence: ATTGTGAATAATTTCACTTT
Locus tag: Pjdr2_6270
|
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| Pjdr2_6270 | -97 | 5.4 | ATTGTGAATAATTTCACTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: yjlC | ||||
| Ortholog function: Hypothetical protein | ||||
| Bacillus subtilis subsp. subtilis str. 168 | BSU12280 | -113 | 6 | ATTGTGCATGAATTCACAAT |
| Bacillus amyloliquefaciens FZB42 | RBAM_012360 | -110 | 6 | ATTGTGCATGAATTCACAAT |
| Bacillus licheniformis DSM 13 | BLi02135 | -80 | 6 | TTTGTGCATAAATTCACAAA |
| Bacillus cereus ATCC 14579 | BC5060 | -82 | 4.8 | TTTGTGAAACTTTGTATAAA |
| Paenibacillus sp. JDR-2 | Pjdr2_6270 | -97 | 5.4 | ATTGTGAATAATTTCACTTT |