Propagation of XylR regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog:	XylR - Bacillales
Regulator type:	Transcription factor
Regulator family:	ROK
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Phylum:	Firmicutes
Propagated regulon:
Target genome	Paenibacillus sp. JDR-2
Orthologous TF(s)	Pjdr2_5182
Regulated genes	2

Built upon 28 sites [see more]

Predicted regulatory interactions in *Paenibacillus sp. JDR-2*
	Locus tag	Position	Score	Sequence
Position: -127 Score: 6.4 Sequence: TCTTAGTTTGTTTAATAGACAAACT Position: -123 Score: 6.7 Sequence: AGTTTGTTTAATAGACAAACTAAGT Locus tag: Pjdr2_5159
	Pjdr2_5159	-127	6.4	TCTTAGTTTGTTTAATAGACAAACT
		-123	6.7	AGTTTGTTTAATAGACAAACTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylA
Ortholog function: Xylose isomerase (EC 5.3.1.5)
Bacillus subtilis subsp. subtilis str. 168	BSU17600	-100	6.6	AGTTAGTTTGTTTAAACAACAAACT
Bacillus amyloliquefaciens FZB42	RBAM_017350	-101	6.1	AGTTAGTTTGTTTGGGCAACAAACT
Bacillus pumilus SAFR-032	BPUM_1829	-47	5.9	AGTTTGTTGAATCAACTTACAAAGT
Bacillus licheniformis DSM 13	BLi04048	-69	6.4	AGTTAGTTTAATGGTTAAACAAACA
Geobacillus kaustophilus HTA426	GK1875	-87	6.3	ACTTTGTTTATATGATAGACAAACA
Bacillus halodurans C-125	BH2757	-102	6.7	AGTTTGTCTATTGAATAAACTAAGT
Bacillus clausii KSM-K16	ABC0572	-45	6.3	ACTTAGTTTAAATAATAAACAAACC
Oceanobacillus iheyensis HTE831	OB3119	-44	6.7	ACTTTGTTTGTTAGATAAACAAACA
Paenibacillus sp. JDR-2	Pjdr2_5159	-123	6.7	AGTTTGTTTAATAGACAAACTAAGT

Position: -117 Score: 6.2 Sequence: CCTTAGTTTGTCTATTAAACAAACT Position: -113 Score: 6.7 Sequence: AGTTTGTCTATTAAACAAACTAAGT Locus tag: Pjdr2_5182
	Pjdr2_5182	-117	6.2	CCTTAGTTTGTCTATTAAACAAACT
		-113	6.7	AGTTTGTCTATTAAACAAACTAAGT
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylR
Ortholog function: Transcriptional repressor of the xylose metabolism, ROK family
Bacillus subtilis subsp. subtilis str. 168	BSU17590	-268	6.6	AGTTTGTTGTTTAAACAAACTAACT
Bacillus amyloliquefaciens FZB42	RBAM_017340	-187	6.1	AGTTTGTTGCCCAAACAAACTAACT
Bacillus pumilus SAFR-032	BPUM_1830	-191	5.9	ACTTTGTAAGTTGATTCAACAAACT
Bacillus licheniformis DSM 13	BLi04049	-147	6.4	TGTTTGTTTAACCATTAAACTAACT
Geobacillus kaustophilus HTA426	GK2422	-230	6	AATTAGTTTATTATATAAACTAAGA
Bacillus halodurans C-125	BH2758	-151	6.7	ACTTAGTTTATTCAATAGACAAACT
Oceanobacillus iheyensis HTE831	OB3124	-87	5.8	TGTTTGTCTACCGGTTAAACAAAGT
Paenibacillus sp. JDR-2	Pjdr2_5182	-113	6.7	AGTTTGTCTATTAAACAAACTAAGT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of XylR regulog to Paenibacillus sp. JDR-2

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --