Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of YybA regulog to Paenibacillus sp. JDR-2

Reference regulog properties
Source regulog: YybA - Bacillales
Regulator type: Transcription factor
Regulator family: MarR
Regulation mode: repressor
Biological process: Polyamine homeostasis
Effector:
Phylum: Firmicutes
Propagated regulon:
Target genome Paenibacillus sp. JDR-2
Orthologous TF(s) Pjdr2_5021
Regulated genes 2
Built upon 25 sites [see more]
Predicted regulatory interactions in Paenibacillus sp. JDR-2
Locus tag Position Score Sequence
Position: -47
Score: 6.7
Sequence: TTATTGTTGTAAATGCAACAAATT
Locus tag: Pjdr2_5021
Pjdr2_5021 -47 6.7 TTATTGTTGTAAATGCAACAAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: yybA
Ortholog function: Transcriptional regulator, MarR family
Bacillus amyloliquefaciens FZB42 RBAM_037790 -44 6.9 ATTATATTGCATATGCAACAAAAA
Bacillus clausii KSM-K16 ABC3242 -90 6.8 TTTTTATTGCAAATACAATAAAAT
-45 7.2 TTTTTGTTGCATTTACAACAAAAA
Bacillus halodurans C-125 BH3077 -89 7 TTTTTGTTGCATTTACAACAAATT
-42 6.6 TTATTGTTGCATTTGCAATATAAA
Bacillus licheniformis DSM 13 BLi00581 -89 6.8 TTTTTATTGCAAATGCAACAATAT
-42 6.9 ATTATATTGCATTTGCAACAAAAA
Bacillus subtilis subsp. subtilis str. 168 BSU40710 -43 7.2 TTTTTGTTGTAATTGCAACAAAAA
Oceanobacillus iheyensis HTE831 OB1246 -91 7 TTTTTGTTGCAAATACAACATAAT
-43 6.6 TAAATGTTGCATTTGCAACAAAAA
Paenibacillus sp. JDR-2 Pjdr2_5021 -47 6.7 TTATTGTTGTAAATGCAACAAATT
Position: -109
Score: 6.7
Sequence: AATTTGTTGCATTTACAACAATAA
Locus tag: Pjdr2_5022
Pjdr2_5022 -109 6.7 AATTTGTTGCATTTACAACAATAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yyaT
Ortholog function: Putative GCN5-related N-acetyltransferase
Paenibacillus sp. JDR-2 Pjdr2_5022 -109 6.7 AATTTGTTGCATTTACAACAATAA
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