Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of LiaR regulog to Bacillus pumilus SAFR-032

Reference regulog properties
Source regulog: LiaR - Bacillales
Regulator type: Transcription factor
Regulator family: OmpR
Regulation mode: activator
Biological process: Cell wall-active antibiotics stress response
Effector: LiaS, sensor histidine kinase (bacitracin, nisin, ramoplanin, vancomycin)
Phylum: Firmicutes
Propagated regulon:
Target genome Bacillus pumilus SAFR-032
Orthologous TF(s) BPUM_2963
Regulated genes 1
Built upon 11 sites [see more]
Predicted regulatory interactions in Bacillus pumilus SAFR-032
Locus tag Position Score Sequence
Position: -100
Score: 4.6
Sequence: TTACGACTCTGGTCGCAA
Locus tag: BPUM_2968
BPUM_2968 -100 4.6 TTACGACTCTGGTCGCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: liaF
Ortholog function: Inhibitor of LiaR-dependent gene expression LiaF
Anoxybacillus flavithermus WK1 Aflv_0170 -52 5.5 ATACGCCTTGAGTCGTAG
Bacillus amyloliquefaciens FZB42 RBAM_030260 -99 5.1 ATACGACTCCGGTCTGAT
Bacillus clausii KSM-K16 ABC3376 -113 4.9 CTCAGCCTCTAGTCGCAG
Bacillus halodurans C-125 BH1195 -98 5.3 CTCAGACTCAAGGCGGAG
Bacillus licheniformis DSM 13 BLi03497 -99 4.8 ATACGACCCTGGTCGTAC
Bacillus pumilus SAFR-032 BPUM_2968 -100 4.6 TTACGACTCTGGTCGCAA
Bacillus subtilis subsp. subtilis str. 168 BSU33130 -99 5.2 ATACGACTCCGGTCTTAT
Geobacillus kaustophilus HTA426 GK0432 -92 5.6 ATACGCCTCGAGTCGTAG
Oceanobacillus iheyensis HTE831 OB2826 -100 4.8 ATACACCTTAAGTCTTAG
Oceanobacillus iheyensis HTE831 OB2824 -100 4.8 ATACACCTTAAGTCTTAG