Propagation of HTCS_Rgu-2 regulog to Bacteroides plebeius DSM 17135
| Source regulog: | HTCS_Rgu-2 - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | [Other] |
| Regulation mode: | activator |
| Biological process: | Rhamnogalacturonides utilization |
| Effector: | |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides plebeius DSM 17135 |
| Orthologous TF(s) | BACPLE_02293, BACPLE_03129 |
| Regulated genes | 4 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -92
Score: 9.7 Sequence: TATACAAATTTACA-(6)-TGTACAATACTCCA
Locus tag: BACPLE_00251
|
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| BACPLE_00251 | -92 | 9.7 | TATACAAATTTACA-(6)-TGTACAATACTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4172 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00396 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04967 | -89 | 8.7 | TGAACGAATCGCCA-(6)-TGGATAATATTCTA |
| Bacteroides plebeius DSM 17135 | BACPLE_00251 | -92 | 9.7 | TATACAAATTTACA-(6)-TGTACAATACTCCA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4172 | -123 | 9.6 | TGAACAAATATCCA-(6)-TGAATGATATTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0159 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
|
Position: -96
Score: 8.6 Sequence: TGTATGATAATCGA-(6)-TGTATAATAATCCA
Locus tag: BACPLE_00253
|
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| BACPLE_00253 | -96 | 8.6 | TGTATGATAATCGA-(6)-TGTATAATAATCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: BT4147 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Bacteroides ovatus ATCC 8483 | BACOVA_04947 | -141 | 8.2 | TGGACAATATTTCA-(6)-TGTAGTTTTGTACA |
| -83 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA | ||
| Bacteroides plebeius DSM 17135 | BACPLE_00253 | -96 | 8.6 | TGTATGATAATCGA-(6)-TGTATAATAATCCA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4147 | -111 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA |
|
Position: -96
Score: 8.5 Sequence: TACACAATATTCCA-(6)-TGAAGAATTATCGA
Locus tag: BACPLE_00503
|
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| BACPLE_00503 | -96 | 8.5 | TACACAATATTCCA-(6)-TGAAGAATTATCGA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bguA | ||||
| Ortholog function: Beta-glucuronidase (EC 3.2.1.31) | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00368 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04950 | -141 | 8.2 | TGGACAATATTTCA-(6)-TGTAGTTTTGTACA |
| -83 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA | ||
| Bacteroides plebeius DSM 17135 | BACPLE_00503 | -96 | 8.5 | TACACAATATTCCA-(6)-TGAAGAATTATCGA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4151 | -111 | 8.5 | GATACAATATTCTA-(6)-TGTACATCTTTCTA |
| Bacteroides vulgatus ATCC 8482 | BVU_0181 | -94 | 9.3 | TATACGAATTTCCA-(6)-TGTACTTCTTTCTA |
|
Position: -93
Score: 8.9 Sequence: TGTACAAAAGCACA-(6)-TGTACGATATTCCA
Locus tag: BACPLE_03132
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| BACPLE_03132 | -93 | 8.9 | TGTACAAAAGCACA-(6)-TGTACGATATTCCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: rhaH | ||||
| Ortholog function: Rhamnogalacturonyl hydrolase | ||||
| Bacteroides dorei DSM 17855 | BACDOR_00395 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |
| Bacteroides ovatus ATCC 8483 | BACOVA_04972 | -115 | 8.4 | TGAACGAATTTAAA-(6)-TGCACGGAAATCCA |
| Bacteroides plebeius DSM 17135 | BACPLE_03132 | -93 | 8.9 | TGTACAAAAGCACA-(6)-TGTACGATATTCCA |
| Bacteroides thetaiotaomicron VPI-5482 | BT4173 | -117 | 9.2 | TGGACAAATTTAAA-(6)-TGGACAATATTCCA |
| Bacteroides vulgatus ATCC 8482 | BVU_0160 | -108 | 8.9 | TGAACGAATAAACA-(6)-TGAATGAATTTCTA |