Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of KdgR regulog to Bacteroides eggerthii DSM 20697

Reference regulog properties
Source regulog: KdgR - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Glucuronate utilization; Galacturonate utilization
Effector: 2-keto-3-deoxygluconate
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides eggerthii DSM 20697
Orthologous TF(s) BACEGG_01787
Regulated genes 2
Built upon 62 sites [see more]
Predicted regulatory interactions in Bacteroides eggerthii DSM 20697
Locus tag Position Score Sequence
Position: -182
Score: 4.9
Sequence: TTCGTGTACGAAAACGAA
Locus tag: BACEGG_00862
BACEGG_00862 -182 4.9 TTCGTGTACGAAAACGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: sgcC
Ortholog function: putative phosphotransferase enzyme II, C component
Bacteroides dorei DSM 17855 BACDOR_03279 -25 4.5 TTCGTGTGCGAAAACGGT
-3 4.5 TTTGTGCACGATAACGAT
Bacteroides eggerthii DSM 20697 BACEGG_00862 -182 4.9 TTCGTGTACGAAAACGAA
-160 4.1 TTTGTGCACGATAACGAC
Bacteroides ovatus ATCC 8483 BACOVA_04898 -193 4.5 TTCGTGCACGGAAACGAC
-171 4.3 TTTGTGCACGCAAACGTC
Bacteroides plebeius DSM 17135 BACPLE_00506 -154 4.6 TCCGTGTGCGTAAACGAA
Bacteroides stercoris ATCC 43183 BACSTE_03306 -182 4.9 TTCGTGTACGAAAACGAA
-160 4.1 TTTGTGCACGATAACGAC
Bacteroides thetaiotaomicron VPI-5482 BT4107 -194 4.5 TTCGTGCACGGAAACGAC
-172 4.2 TTTGTGCACGTAAACGTC
Bacteroides uniformis ATCC 8492 BACUNI_03601 -183 4.6 TTCGTGTACGAAAACGAG
-161 4.1 TTTGTGCACGATAACGAC
Bacteroides vulgatus ATCC 8482 BVU_1796 -181 4.5 TTCGTGTGCGAAAACGGT
-159 4.5 TTTGTGCACGATAACGAT
Position: -64
Score: 4.4
Sequence: ATCGTGTACGTAAACGAC
Locus tag: BACEGG_03270
BACEGG_03270 -64 4.4 ATCGTGTACGTAAACGAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: kduI1
Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Bacteroides cellulosilyticus DSM 14838 BACCELL_02166 -64 4.8 ATCGTGTACGTAAACGAA
Bacteroides eggerthii DSM 20697 BACEGG_03270 -64 4.4 ATCGTGTACGTAAACGAC
Bacteroides fragilis NCTC 9343 BF0082 -61 4.1 GTCGTGTGCGTAAACGGA
Bacteroides ovatus ATCC 8483 BACOVA_00140 -66 4.8 ATCGTGTACGTAAACGAA
Bacteroides stercoris ATCC 43183 BACSTE_02324 -65 4.4 ATCGTGTACGTAAACGAC
Bacteroides thetaiotaomicron VPI-5482 BT3231 -66 4.8 ATCGTGTACGTAAACGAT
Bacteroides uniformis ATCC 8492 BACUNI_04204 -64 4.8 ATCGTGTACGCAAACGAT
© 2009-2020 RegPrecise