Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Propagation of HTCS_Ara-2 regulog to Bacteroides thetaiotaomicron VPI-5482

Reference regulog properties
Source regulog: HTCS_Ara-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator (repressor)
Biological process: Arabinan utilization
Effector: Pectic galactan
Phylum: Bacteroidetes
Propagated regulon:
Target genome Bacteroides thetaiotaomicron VPI-5482
Orthologous TF(s) BT3049
Regulated genes 3
Built upon 11 sites [see more]
Predicted regulatory interactions in Bacteroides thetaiotaomicron VPI-5482
Locus tag Position Score Sequence
Position: -105
Score: 8
Sequence: TGCAAGATTT-(11)-TGGTCGTTTT
Locus tag: BT3043
BT3043 -105 8 TGCAAGATTT-(11)-TGGTCGTTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: abnX
Ortholog function: Putabtive arabinosidase, GH30 family
Bacteroides cellulosilyticus DSM 14838 BACCELL_01910 -132 9.8 TGCAAGATTT-(12)-TGCAAGATTT
Bacteroides dorei DSM 17855 BACDOR_04895 -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT
Bacteroides ovatus ATCC 8483 BACOVA_02661 -50 8 TGTATGTTTT-(11)-TGTGTGATTT
Bacteroides thetaiotaomicron VPI-5482 BT3043 -105 8 TGCAAGATTT-(11)-TGGTCGTTTT
Bacteroides vulgatus ATCC 8482 BVU_0844 -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT
Position: -262
Score: 9
Sequence: TGAATGATTC-(11)-TGAATGATTT
Locus tag: BT3047
BT3047 -262 9 TGAATGATTC-(11)-TGAATGATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: sbp_Ara-4
Ortholog function: Six-beta-propeller protein, cell surface exposed, putatively involved in arabinan binding
Bacteroides thetaiotaomicron VPI-5482 BT3047 -262 9 TGAATGATTC-(11)-TGAATGATTT
Position: -81
Score: 8.9
Sequence: TGAATCATTT-(12)-TACAAGATTT
Locus tag: BT3049
BT3049 -81 8.9 TGAATCATTT-(12)-TACAAGATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: HTCS_Ara-2
Ortholog function: Arabinan utilization hybrid two-component system, HTH AraC family
Bacteroides ovatus ATCC 8483 BACOVA_02667 -76 8.5 TGAACGATTT-(12)-TAAAATATTT
Bacteroides plebeius DSM 17135 BACPLE_00182 -56 6.8 TGTATGATTT-(12)-TTCAATAAAT
Bacteroides thetaiotaomicron VPI-5482 BT3049 -81 8.9 TGAATCATTT-(12)-TACAAGATTT
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