Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing abnX gene

Properties
Regulog: HTCS_Ara-2 - Bacteroidaceae
Regulator type: Transcription factor
Regulator family: [Other]
Regulation mode: activator (repressor)
Biological process: Arabinan utilization
Effector: Pectic galactan
Phylum: Bacteroidetes
Built upon 11 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Bacteroides cellulosilyticus DSM 14838
Position: -132
Score: 9.78853
Sequence: TGCAAGATTT-(12)-TGCAAGATTT
Locus tag: BACCELL_01905
Name: BVU_0840
Funciton: Conserved hypothetical protein, presumably involved in arabinogalactan utilization
Locus tag: BACCELL_01906
Name: susC_Ara-6
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BACCELL_01907
Name: susC_Ara-6
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BACCELL_01908
Name: BVU_0843
Funciton: Predicted endo-beta-1,6-galactanase
Locus tag: BACCELL_01909
Name: bgaL
Funciton: Beta-galactosidase
Locus tag: BACCELL_01910
Name: abnX
Funciton: Putabtive arabinosidase, GH30 family
BVU_0840-susC_Ara-6-susC_Ara-6-BVU_0843-bgaL-abnX -132 9.8 TGCAAGATTT-(12)-TGCAAGATTT BACCELL_01905
Bacteroides dorei DSM 17855
Position: -133
Score: 9.78853
Sequence: TGCAAGATTT-(12)-TGCAAGATTT
Locus tag: BACDOR_04891
Name: BVU_0840
Funciton: Conserved hypothetical protein, presumably involved in arabinogalactan utilization
Locus tag: BACDOR_04892
Name: susC_Ara-6
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BACDOR_04893
Name: susC_Ara-6
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BACDOR_04894
Name: BVU_0843
Funciton: Predicted endo-beta-1,6-galactanase
Locus tag: BACDOR_04895
Name: abnX
Funciton: Putabtive arabinosidase, GH30 family
BVU_0840-susC_Ara-6-susC_Ara-6-BVU_0843-abnX -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT BACDOR_04891
Bacteroides ovatus ATCC 8483
Position: -50
Score: 7.97598
Sequence: TGTATGTTTT-(11)-TGTGTGATTT
Locus tag: BACOVA_02661
Name: abnX
Funciton: Putabtive arabinosidase, GH30 family
abnX -50 8 TGTATGTTTT-(11)-TGTGTGATTT BACOVA_02661
Bacteroides thetaiotaomicron VPI-5482
Position: -105
Score: 7.95405
Sequence: TGCAAGATTT-(11)-TGGTCGTTTT
Locus tag: BT3043
Name: abnX
Funciton: Putabtive arabinosidase, GH30 family
abnX -105 8 TGCAAGATTT-(11)-TGGTCGTTTT BT3043
Bacteroides vulgatus ATCC 8482
Position: -133
Score: 9.78853
Sequence: TGCAAGATTT-(12)-TGCAAGATTT
Locus tag: BVU_0840
Name: BVU_0840
Funciton: Conserved hypothetical protein, presumably involved in arabinogalactan utilization
Locus tag: BVU_0841
Name: susC_Ara-6
Funciton: TonB-dependent outer membrane transporter of arabinan oligosaccharides
Locus tag: BVU_0842
Name: susC_Ara-6
Funciton: Outer membrane polysaccharide binding protein for arabinan oligosaccharides
Locus tag: BVU_0843
Name: BVU_0843
Funciton: Predicted endo-beta-1,6-galactanase
Locus tag: BVU_0844
Name: abnX
Funciton: Putabtive arabinosidase, GH30 family
BVU_0840-susC_Ara-6-susC_Ara-6-BVU_0843-abnX -133 9.8 TGCAAGATTT-(12)-TGCAAGATTT BVU_0840