Propagation of XylR regulog to Bacteroides fragilis YCH46
| Source regulog: | XylR - Bacteroidaceae |
| Regulator type: | Transcription factor |
| Regulator family: | NrtR |
| Regulation mode: | repressor |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Phylum: | Bacteroidetes |
| Propagated regulon: | |
| Target genome | Bacteroides fragilis YCH46 |
| Orthologous TF(s) | BF2260 |
| Regulated genes | 1 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -280
Score: 5.4 Sequence: CATACCCTATAAAATACAATAAG
Position: -197
Score: 5.1 Sequence: CTTTCTGTACTTTCTACAATTAC
Position: -150
Score: 5.7 Sequence: CATATTGTTATCGATACAATAAG
Position: -117
Score: 5.4 Sequence: CTTAGTGTAAAATTTACGATATG
Locus tag: BF2260
|
||||
| BF2260 | -280 | 5.4 | CATACCCTATAAAATACAATAAG | |
| -197 | 5.1 | CTTTCTGTACTTTCTACAATTAC | ||
| -150 | 5.7 | CATATTGTTATCGATACAATAAG | ||
| -117 | 5.4 | CTTAGTGTAAAATTTACGATATG | ||
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: xylR | ||||
| Ortholog function: Predicted regulator of xylose utilization, NrtR family | ||||
| Bacteroides cellulosilyticus DSM 14838 | BACCELL_04758 | -200 | 5.6 | CTTATTGTACTTCCTACAATTAC |
| -152 | 5.7 | CATATTGTACTTTCAACGATAAG | ||
| -119 | 5.8 | GATATTGTAAAATGTACGATATC | ||
| Bacteroides dorei DSM 17855 | BACDOR_00865 | -103 | 5.1 | TATATTGTAGTGTATATGATAAG |
| -70 | 4.9 | CATATTGTATAATAGATGATATT | ||
| Bacteroides eggerthii DSM 20697 | BACEGG_02642 | -208 | 5.1 | GTTATTGTGCCTATTACAATTAC |
| -161 | 6.1 | CATATTGTATTTTGTACGATAAC | ||
| -128 | 5.4 | GATATTGTAAAAGATATGATATG | ||
| Bacteroides fragilis NCTC 9343 | BF2354 | -280 | 5.4 | CATACCCTATAAAATACAATAAG |
| -197 | 5.1 | CTTTCTGTACTTTCTACAATTAC | ||
| -150 | 5.7 | CATATTGTTATCGATACAATAAG | ||
| -117 | 5.4 | CTTAGTGTAAAATTTACGATATG | ||
| Bacteroides ovatus ATCC 8483 | BACOVA_02532 | -279 | 6.1 | CATATCGTTTAAAATACAATAAG |
| -195 | 5.6 | GTTTTTGTACTTTATACAATTAC | ||
| -149 | 5.4 | CATATTGTAATTCGTAAGATAAC | ||
| -116 | 5.4 | CATATTGTAGAATGTATGATATG | ||
| Bacteroides plebeius DSM 17135 | BACPLE_02263 | -147 | 5.8 | CATATTGTATGAACTACAAAAAC |
| -114 | 5.2 | GATATTGTATCAAATAAGATATT | ||
| Bacteroides stercoris ATCC 43183 | BACSTE_01380 | -208 | 5.5 | GTTATTGTATCTGCTACAATTAC |
| -161 | 6.3 | CATATTGTATTTTATACGATAAC | ||
| -128 | 5.8 | GATATTGTAAGATATACGATATG | ||
| Bacteroides thetaiotaomicron VPI-5482 | BT0791 | -280 | 5.9 | GATATCGTTTGAAATACAATAAG |
| -196 | 5.7 | CTTTTTGTACTTTATACAATTAC | ||
| -150 | 5.1 | CATATTGTAATTCAGAAGATAAC | ||
| -117 | 5.4 | CATATTGTAGATTGTATGATATG | ||
| Bacteroides uniformis ATCC 8492 | BACUNI_00695 | -209 | 5.7 | CTTATTGTACTTCCTACAATTAG |
| -161 | 5.9 | CATATTGTATTCCATACGATAAC | ||
| -128 | 5.7 | GATATTGTATAAAGTAAGATATG | ||
| Bacteroides vulgatus ATCC 8482 | BVU_3955 | -169 | 5.1 | TATATTGTAGTGTATATGATAAG |
| -136 | 4.5 | GATATTGTATGATGGATGATATT | ||