Propagation of XylR regulog to Bacteroides fragilis YCH46

Reference regulog properties
Source regulog:	XylR - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	NrtR
Regulation mode:	repressor
Biological process:	Xylose utilization
Effector:	Xylose
Phylum:	Bacteroidetes
Propagated regulon:
Target genome	Bacteroides fragilis YCH46
Orthologous TF(s)	BF2260
Regulated genes	1

Built upon 43 sites [see more]

Predicted regulatory interactions in *Bacteroides fragilis YCH46*
	Locus tag	Position	Score	Sequence
Position: -280 Score: 5.4 Sequence: CATACCCTATAAAATACAATAAG Position: -197 Score: 5.1 Sequence: CTTTCTGTACTTTCTACAATTAC Position: -150 Score: 5.7 Sequence: CATATTGTTATCGATACAATAAG Position: -117 Score: 5.4 Sequence: CTTAGTGTAAAATTTACGATATG Locus tag: BF2260
	BF2260	-280	5.4	CATACCCTATAAAATACAATAAG
		-197	5.1	CTTTCTGTACTTTCTACAATTAC
		-150	5.7	CATATTGTTATCGATACAATAAG
		-117	5.4	CTTAGTGTAAAATTTACGATATG
Supported by regulated orthologs from reference regulons
Ortholog gene name: xylR
Ortholog function: Predicted regulator of xylose utilization, NrtR family
Bacteroides cellulosilyticus DSM 14838	BACCELL_04758	-200	5.6	CTTATTGTACTTCCTACAATTAC
		-152	5.7	CATATTGTACTTTCAACGATAAG
		-119	5.8	GATATTGTAAAATGTACGATATC
Bacteroides dorei DSM 17855	BACDOR_00865	-103	5.1	TATATTGTAGTGTATATGATAAG
		-70	4.9	CATATTGTATAATAGATGATATT
Bacteroides eggerthii DSM 20697	BACEGG_02642	-208	5.1	GTTATTGTGCCTATTACAATTAC
		-161	6.1	CATATTGTATTTTGTACGATAAC
		-128	5.4	GATATTGTAAAAGATATGATATG
Bacteroides fragilis NCTC 9343	BF2354	-280	5.4	CATACCCTATAAAATACAATAAG
		-197	5.1	CTTTCTGTACTTTCTACAATTAC
		-150	5.7	CATATTGTTATCGATACAATAAG
		-117	5.4	CTTAGTGTAAAATTTACGATATG
Bacteroides ovatus ATCC 8483	BACOVA_02532	-279	6.1	CATATCGTTTAAAATACAATAAG
		-195	5.6	GTTTTTGTACTTTATACAATTAC
		-149	5.4	CATATTGTAATTCGTAAGATAAC
		-116	5.4	CATATTGTAGAATGTATGATATG
Bacteroides plebeius DSM 17135	BACPLE_02263	-147	5.8	CATATTGTATGAACTACAAAAAC
		-114	5.2	GATATTGTATCAAATAAGATATT
Bacteroides stercoris ATCC 43183	BACSTE_01380	-208	5.5	GTTATTGTATCTGCTACAATTAC
		-161	6.3	CATATTGTATTTTATACGATAAC
		-128	5.8	GATATTGTAAGATATACGATATG
Bacteroides thetaiotaomicron VPI-5482	BT0791	-280	5.9	GATATCGTTTGAAATACAATAAG
		-196	5.7	CTTTTTGTACTTTATACAATTAC
		-150	5.1	CATATTGTAATTCAGAAGATAAC
		-117	5.4	CATATTGTAGATTGTATGATATG
Bacteroides uniformis ATCC 8492	BACUNI_00695	-209	5.7	CTTATTGTACTTCCTACAATTAG
		-161	5.9	CATATTGTATTCCATACGATAAC
		-128	5.7	GATATTGTATAAAGTAAGATATG
Bacteroides vulgatus ATCC 8482	BVU_3955	-169	5.1	TATATTGTAGTGTATATGATAAG
		-136	4.5	GATATTGTATGATGGATGATATT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of XylR regulog to Bacteroides fragilis YCH46

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --