Propagation of KdgR regulog to Bacteroides fragilis YCH46

Reference regulog properties
Source regulog:	KdgR - Bacteroidaceae
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Glucuronate utilization; Galacturonate utilization
Effector:	2-keto-3-deoxygluconate
Phylum:	Bacteroidetes
Propagated regulon:
Target genome	Bacteroides fragilis YCH46
Orthologous TF(s)	BF2701
Regulated genes	4

Built upon 62 sites [see more]

Predicted regulatory interactions in *Bacteroides fragilis YCH46*
	Locus tag	Position	Score	Sequence
Position: -61 Score: 4.1 Sequence: GTCGTGTGCGTAAACGGA Locus tag: BF0071
	BF0071	-61	4.1	GTCGTGTGCGTAAACGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kduI1
Ortholog function: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase (EC 5.3.1.17)
Bacteroides cellulosilyticus DSM 14838	BACCELL_02166	-64	4.8	ATCGTGTACGTAAACGAA
Bacteroides eggerthii DSM 20697	BACEGG_03270	-64	4.4	ATCGTGTACGTAAACGAC
Bacteroides fragilis NCTC 9343	BF0082	-61	4.1	GTCGTGTGCGTAAACGGA
Bacteroides ovatus ATCC 8483	BACOVA_00140	-66	4.8	ATCGTGTACGTAAACGAA
Bacteroides stercoris ATCC 43183	BACSTE_02324	-65	4.4	ATCGTGTACGTAAACGAC
Bacteroides thetaiotaomicron VPI-5482	BT3231	-66	4.8	ATCGTGTACGTAAACGAT
Bacteroides uniformis ATCC 8492	BACUNI_04204	-64	4.8	ATCGTGTACGCAAACGAT

Position: -129 Score: 4.5 Sequence: GTCGTGTGCGAAAACGAT Position: -107 Score: 4.5 Sequence: ATTGTGCTCGATAACGAA Locus tag: BF0885
	BF0885	-129	4.5	GTCGTGTGCGAAAACGAT
		-107	4.5	ATTGTGCTCGATAACGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hexT
Ortholog function: Hexuronate transporter
Bacteroides cellulosilyticus DSM 14838	BACCELL_03118	-170	4.6	TTCGTGTGCGAGAACGAG
		-154	4.7	AGTGTTTTCGTGCACGAT
Bacteroides dorei DSM 17855	BACDOR_03281	-25	4.5	TTCGTGTGCGAAAACGGT
		-3	4.5	TTTGTGCACGATAACGAT
Bacteroides eggerthii DSM 20697	BACEGG_00860	-182	4.9	TTCGTGTACGAAAACGAA
		-160	4.1	TTTGTGCACGATAACGAC
Bacteroides fragilis NCTC 9343	BF0809	-198	4.5	GTCGTGTGCGAAAACGAT
		-176	4.6	ATTGTGTTCGATAACGAA
Bacteroides ovatus ATCC 8483	BACOVA_04896	-193	4.5	TTCGTGCACGGAAACGAC
		-171	4.3	TTTGTGCACGCAAACGTC
Bacteroides plebeius DSM 17135	BACPLE_00504	-154	4.6	TCCGTGTGCGTAAACGAA
Bacteroides stercoris ATCC 43183	BACSTE_03308	-182	4.9	TTCGTGTACGAAAACGAA
		-160	4.1	TTTGTGCACGATAACGAC
Bacteroides thetaiotaomicron VPI-5482	BT4105	-194	4.5	TTCGTGCACGGAAACGAC
		-172	4.2	TTTGTGCACGTAAACGTC
Bacteroides uniformis ATCC 8492	BACUNI_03603	-183	4.6	TTCGTGTACGAAAACGAG
		-161	4.1	TTTGTGCACGATAACGAC
Bacteroides vulgatus ATCC 8482	BVU_1794	-181	4.5	TTCGTGTGCGAAAACGGT
		-159	4.5	TTTGTGCACGATAACGAT

Position: -228 Score: 5.7 Sequence: TTTGTGCCCGGACACACT Position: -146 Score: 5.5 Sequence: TTTGTGTCCGCACACGGA Locus tag: BF2700
	BF2700	-228	5.7	TTTGTGCCCGGACACACT
		-146	5.5	TTTGTGTCCGCACACGGA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgK
Ortholog function: 2-dehydro-3-deoxygluconate kinase (EC 2.7.1.45)
Bacteroides dorei DSM 17855	BACDOR_02921	-228	5.5	ATTGTGCTCGTACACACT
		-145	5.4	TTTGTGCACGCACACGGA
Bacteroides eggerthii DSM 20697	BACEGG_01788	-227	6	TTTGTGTTCGTACACAAT
		-145	5.9	TTTGTGCCCGCACACGAA
Bacteroides fragilis NCTC 9343	BF2719	-228	5.7	TTTGTGCCCGGACACACT
		-146	5.5	TTTGTGTCCGCACACGGA
Bacteroides ovatus ATCC 8483	BACOVA_03830	-228	6	TTTGTGCTCGCACACAAT
		-146	5.9	TTTGTGCCCGCACACGAA
Bacteroides plebeius DSM 17135	BACPLE_00831	-112	6.1	TTTGTGTGCGTACACAAA
Bacteroides stercoris ATCC 43183	BACSTE_00505	-228	5.9	TTTGTGCCCGTGCACAAT
		-146	5.9	TTTGTGCCCGCACACGAA
Bacteroides thetaiotaomicron VPI-5482	BT0488	-228	5.6	TATGTGCTCGCACACAAT
		-146	5.9	TTTGTGCCCGCACACGAA
Bacteroides uniformis ATCC 8492	BACUNI_01828	-231	5.6	CTTGTGCTCGCACACAAT
		-149	5.8	TTTGTGCCCGTACACGAA
Bacteroides vulgatus ATCC 8482	BVU_3055	-228	5.5	ATTGTGCTCGTGCACACT
		-145	5.4	TTTGTGCACGCACACGGA

Position: -125 Score: 5.5 Sequence: TCCGTGTGCGGACACAAA Position: -43 Score: 5.7 Sequence: AGTGTGTCCGGGCACAAA Locus tag: BF2701
	BF2701	-125	5.5	TCCGTGTGCGGACACAAA
		-43	5.7	AGTGTGTCCGGGCACAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: kdgR
Ortholog function: Predicted transcriptional regulator for altronate catabolism, LacI family
Bacteroides cellulosilyticus DSM 14838	BACCELL_04099	-154	5.6	ATTGTGTGCGGACACAAC
Bacteroides dorei DSM 17855	BACDOR_02922	-115	5.4	TCCGTGTGCGTGCACAAA
		-32	5.5	AGTGTGTACGAGCACAAT
Bacteroides eggerthii DSM 20697	BACEGG_01787	39	5.9	TTCGTGTGCGGGCACAAA
		121	6	ATTGTGTACGAACACAAA
Bacteroides fragilis NCTC 9343	BF2720	-125	5.5	TCCGTGTGCGGACACAAA
		-43	5.7	AGTGTGTCCGGGCACAAA
Bacteroides ovatus ATCC 8483	BACOVA_03831	-125	5.9	TTCGTGTGCGGGCACAAA
		-43	6	ATTGTGTGCGAGCACAAA
Bacteroides plebeius DSM 17135	BACPLE_00833	-123	6.1	TTTGTGTACGCACACAAA
Bacteroides stercoris ATCC 43183	BACSTE_00506	39	5.9	TTCGTGTGCGGGCACAAA
		121	5.9	ATTGTGCACGGGCACAAA
Bacteroides thetaiotaomicron VPI-5482	BT0487	-124	5.9	TTCGTGTGCGGGCACAAA
		-42	5.6	ATTGTGTGCGAGCACATA
Bacteroides uniformis ATCC 8492	BACUNI_01826	-210	5.8	TTCGTGTACGGGCACAAA
		-128	5.6	ATTGTGTGCGAGCACAAG
Bacteroides vulgatus ATCC 8482	BVU_3054	-116	5.4	TCCGTGTGCGTGCACAAA
		-33	5.5	AGTGTGCACGAGCACAAT

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of KdgR regulog to Bacteroides fragilis YCH46

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --